Nothoprocta perdicaria (Chilean tinamou): 112949827
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Entry
112949827 CDS
T07556
Symbol
PKD1L2
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
npd04040
]
112949827 (PKD1L2)
Ion channels [BR:
npd04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
112949827 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
REJ
Lectin_C
Gal_Lectin
Ion_trans
GPS
Abhydrolase_9_N
Motif
Other DBs
NCBI-GeneID:
112949827
NCBI-ProteinID:
XP_025898067
LinkDB
All DBs
Position
Unknown
AA seq
2517 aa
AA seq
DB search
MVCCCYCCKQRRERRNIDDMTRMTPQAPEKSSKKSSEAIGKSSATQGTELRMWLAVAILI
SLAARWAVEEATVGEGIPCSKYQTAYKYSCYEFVRLQRTFTSAQSWCERGGGHLVFIEDE
ETQDFLQKHLSEDQEWWIGLISDSLLNETSDGSVIWLDTSNISYSNWYVDQPSPFSSTCG
YILKNAKHQWGMTENCSQEFGFICEFESGQSIACNNYNATVQCGSGEVIEIGESFYGRKT
PHYCVLETPLQYDMDKDCSWISVKDEVAGQCHGLQACQVAADGSFFGDPCPASGSYLSIQ
YYCKEGLQLAVTEASFASEDITVTLTWMLSPYSGNLSCIISTGDGHSIDPYYPPMLVSNV
THTYSSPGEFIVFVECTTSEWHVTAQKRVTVQDKKDQLSITGCYSQYESGNSSYCRTLYG
ELLWIQVELSGGNEVTYIILADNKTVTESSAKEGIVPHNLTLNSTLQELLGPGIHQLEIR
ASRNKSTSELSKSIAVHFVEPVSGLQATLASHTVELGENLEINVSVSHGAPDKVKFEVVG
SNETNSHEEDCPHGEPRTYRIPVYSEGTFLVKVVAMNAFSNMSVDIGLIYVLANSSLEED
SANVKGSSRTNTQKTNDHKRKNKMYIKPSRHVDPFTTVTLGWPGNSDNSSFLWSCGACWP
AWNECVQQETILVNRSEVHIPARCLPPPKSAVTVRVTVRNHGSEERQDEQCLYVTAKQEL
QLEIRCEANCKPVNASKEVVLSVSGLKESQAVYYNWYLDNTFQTKPTPLPPACSLTGFRQ
SSLNLLQSNTSRLTMNSSFLQTQEEAFQIKVTAMAPHGYGEARYLMSSVPAPSTPACAVS
PWEGSVLTTFTVSCSACLEDPCEPSRSRQLTYCFYLKPNSLLHCGPDPELFPVYLPLGEE
ENNFILHITITVSNNFGDTVQTNASVKVGHTDMTKGNLTLQTIVSEKANTILKEGNSSTS
LFQLYKSVTSVLNQETQEESLNASLQTDTRKELRGLMLTTLSAVNITSVQTALQMSEVLQ
EITYKSEELSISAQVEASNTLKDVSASLLTVNTEDSRDDQKRKDAANYLFNAVSNVLKAS
IQNRDVNTSVPEAEQSSVSSQLLNTVENLQSALLFGKEPDDEPMVLTTPTATMYINRLQT
ESMDRTSINVSNSSSASFTLPPASSLSVSGLDDETVDIRMVSFAANPFFSSDTSFDVSGT
VGGLSLTGLDGLIIPVSNLKENIEIILPRLSASQEDRIFLTLGNFSVFQVNVTSENTSIV
IHLESEQDVPLILYLGYGYRPNETNYDMKNHLXNIYVPGEENTWVLSPENLFFGEGTYYF
LVLQDMGMDSTVNDRLTIAVTCFASRCVFWDEHQGKWNSYGCHVGPKTNPRSTQCLCNHL
TFFGSSFFVIPNAIDVSKTVELFGTFVDNPVVVTTVGCIFLVYVLVLIWARRKDIQDDAK
VKITVLEDNHPFAQYRYLVTVFTGHRRGAATTSKVTLTLYGLEGESEPHHLTDPDTPVFE
RGGVDVFLLCTLFPLGELQSIRLWHDNSGYSPSWYVNRVLVHDLAWDQKWYFLCNSWLAI
DIGECVLDKVFPVATEQDMKQFSNLFFMKTSKGFQDGHIWYSVFSRSPRSSFTRAQRVSC
CFSLLLCTMLTSIMFWGVPKDPAEQKMDLGKIEFTWQEVMIGFESSLLMFPINLLIVQIF
RNIRSRPATQGREKKPGKSGRVSPSLPPTGALTQAVSLTPEADIRRIANSLFKALKTPSL
TSISDLGKSTNINTLLALVEDIICQQNRAGHEFYDDSKKKDDPIILTIGAVDMQEKTSPT
PEKGMYEQLKYSDYNRCLYMQLQHVEMELELVGPHAFQMPQSYTQAVRQVQHMKNLLESR
ICSAAASSESFSRDGKKGPSSKGLPWWFVFIGWFLVAATSGVSGFFTMLYGLHYGKENSI
KWLISMAISFFESLFITQPLKVLGFAAFFALVLKKVEQEDEESTAIDGSLSAPGDSNPLF
GVRRDSRSNIYQPPPASDVEKMKVNCMKEQKAFALIREILAYLGFLWMLLLVAYGQRDPN
SYYLNKHIENSFTDGFQDIYSYQDFFTWANTTLVKNLYGSYKGFITDGNSKLVGSARIRQ
VRVKGDTCPVAAQLQRAIRECRAPYTFHSEDTSGYGEHWNASAFDNSSDLSSAWQYQSQA
QLRGHPIWGKFAVYRGGGYVIHLGTDPHNASRILQYLFTNVWLDTFTRAVFVEFTVYNAN
VNLFCIVTLMFETNALGAFFTSAELQSIRLYPYTSSLHIFVIAAEVIYFFFILYYMVIQV
KLMKTLKWRYFQSKWNLLELAIIVTSWSALSVFVKRTILGSRDISYYQEHKDDSVSFNET
ARADAVLGYLIAFLVLLSTVKLWHLLRLNPKLNMITSTLRRAWGDISGFITVIAIMFLAY
SIATNLIFGWKLYSYKTLFDSAETMVSLQLGIFNYEEVLDCNPILGSFLIGSCIIFMTFV
VLNLFISVILVAFSEEQKHYQASEEEEIVDLMLMKLFSFLGVKCKKEEKPTTNDQQD
NT seq
7554 nt
NT seq
+upstream
nt +downstream
nt
atggtctgttgctgctattgttgcaagcagcgaagagaaaggagaaatattgatgacatg
acaaggatgacacctcaagcccctgaaaagagcagcaaaaagagcagtgaagcaataggg
aagagcagtgccacacagggcactgagctgagaatgtggcttgcggttgcaattctgatt
tcccttgctgcacgctgggctgtggaggaggcaactgtcggggaaggaatcccttgctca
aagtaccagacagcttacaagtattcatgctatgagtttgttagactccagcgcaccttc
acaagtgcccagagctggtgcgagagaggaggggggcaccttgtctttattgaagatgag
gaaactcaagacttcttgcagaaacatctctctgaggaccaggaatggtggataggactg
atctcagactccttgctgaatgaaacttctgatgggtcagtgatctggctggacacttca
aatataagctacagtaactggtatgtggatcaaccatctcccttttcatccacatgtggg
tacatcctgaagaatgccaagcatcagtggggtatgactgaaaattgcagccaggaattt
ggcttcatttgcgaatttgaatctggccagagcattgcttgtaataactacaatgccact
gtacagtgtggatcaggagaagttattgaaattggagagagtttctatgggcggaagacc
cctcactactgtgtgttggagacgcctctccagtatgatatggacaaagactgtagctgg
atcagtgtcaaagatgaagtagcaggacagtgtcatggtctccaggcctgccaggtggca
gcggatggctctttctttggtgatccttgtccagcttcgggaagctatttgtctattcag
tactactgcaaggaaggtctgcagctggctgtaacagaagcgagctttgcctctgaggac
atcacagtcactctgacctggatgctctctccatactctggcaacctctcatgcatcatt
agcactggagatggacacagtattgatccctattaccctccaatgctggtcagcaatgtc
acacacacatattcatctcctggagagtttattgtttttgtggaatgtacaaccagtgaa
tggcacgtgacagctcagaaacgggtgactgttcaggataagaaggatcaacttagcatt
actgggtgctatagccagtatgaatctgggaacagctcttactgccgcactctatatgga
gagttgttatggattcaagtagaactcagtggaggtaatgaagtgacctacatcatatta
gcagataacaagacagtcaccgaatccagtgcaaaagaaggaattgtccctcacaatctg
acactcaacagtaccttgcaagagctactaggccctgggatacaccagctggaaatccgg
gcatccaggaacaaatccacatctgagctctcaaagagcattgctgttcacttcgttgag
ccagtatctggtcttcaggctactttagcttctcacactgtggagctgggggagaattta
gagataaatgtctctgtgtcgcatggagccccagacaaagtgaagtttgaggttgtggga
tccaatgaaacaaactcccacgaggaagactgccctcacggagagcctcgaacataccgc
atccctgtgtactctgaaggtactttcctagtaaaagtggtggccatgaatgccttctcc
aacatgagtgtggatattggactcatctacgtgctggcaaacagttcccttgaagaagat
tctgctaatgttaaaggtagttccagaacaaatacccagaagacaaacgatcacaaaaga
aaaaacaaaatgtatattaaaccaagtcgtcatgtggatcctttcacaactgttacactc
ggctggcctggcaacagtgataattctagtttcctctggtcctgtggagcttgctggcct
gcgtggaatgaatgtgtgcagcaggagacaatcctggtcaaccgaagtgaggtgcacatc
ccagcacgctgccttcctcccccaaagtcggcagtgactgtgagggtcacggtgcgaaac
catggcagtgaagagaggcaagacgagcaatgtctgtacgtaactgcaaaacaagaactg
caactagaaatcaggtgtgaagcaaattgcaagccagtaaatgctagcaaggaagttgtt
ttgagtgtctctgggctgaaggagtcgcaggcagtatattataactggtatttagataac
actttccaaaccaagcccacacccctccctccagcctgcagcctgactgggtttcggcag
agctctctgaatctgcttcagagcaacacatccaggctgaccatgaacagctccttcttg
cagacacaggaagaagctttccagattaaagtaacagcaatggctccacatggatacggc
gaggcacggtacctcatgagctcggtgcccgcgccctccacgccggcctgcgctgtgtct
ccctgggagggatccgtgctcaccacgttcacggtctcctgcagtgcctgcctagaggat
ccgtgcgagcctagccgcagcaggcagctcacgtactgcttctatctgaaaccaaattct
ctcttgcactgtggccccgatcctgaactcttcccagtttaccttccacttggagaagag
gaaaataatttcattttacatataacaattactgtgagcaacaactttggggatacagtt
caaactaatgcttctgtgaaggtgggacacacagatatgaccaaggggaacctcaccctg
cagaccatcgtatctgagaaggccaacaccattctcaaagaggggaacagcagcacgagt
ctgttccagctgtataagtcagtgacctcagttcttaatcaggagacccaagaggaaagt
cttaacgcatccttacagaccgacacacgaaaagagctccgagggttgatgctgacaacg
ctgtctgctgttaacataacatcagtgcaaactgctcttcagatgtcagaagttttgcaa
gaaatcacatacaagagtgaagagctctctatctcagcacaggtagaagccagcaacacc
ctaaaagatgtcagtgcttccttgcttactgtaaacacggaggacagcagagatgatcag
aagagaaaggacgcagccaactacctatttaatgcagttagcaatgtgcttaaagcttcc
atacaaaacagagatgtgaatacctcagtgcccgaggcagaacagagctcagtgtcatcc
cagctcttgaatacagttgaaaatctacagagtgcccttctgtttgggaaagaaccagat
gatgaaccaatggtccttaccactcctactgccacaatgtatataaacagattacaaaca
gaaagcatggacaggacatccattaatgtctccaattccagctctgccagctttactctc
ccacctgcttcttccctcagtgtttcaggacttgatgatgaaacagtggatataaggatg
gtgagctttgcagcgaacccctttttctccagtgacaccagttttgatgtcagcggaaca
gtgggaggtttaagtcttaccggtttggatggtttgatcataccagtcagcaatctcaaa
gaaaacattgagattatactaccaaggctttcagcaagtcaggaagacaggatttttttg
accttaggcaattttagtgttttccaagtcaatgtcacttcagaaaacacatctatcgtg
atccacctggagtctgaacaagatgttccactgatactctacttaggatatggatatcgt
ccaaatgaaactaattatgatatgaaaaatcacctgtaaaatatttatgttccaggtgag
gaaaacacctgggttcttagtccagaaaacctcttttttggcgagggaacttattatttc
ctggttttacaagatatgggaatggattctacagtcaatgacaggctaaccatagctgtc
acttgctttgcatcccgctgcgtattttgggatgagcaccaggggaaatggaatagctat
ggatgtcatgtaggacccaaaactaatcctagaagcacacagtgcctctgcaaccacctg
accttctttgggagctccttcttcgtcatacccaatgccattgatgttagcaaaactgta
gagctatttggtacattcgtggacaaccccgtggtggtgacaactgtaggctgtatcttt
ctggtgtatgtgcttgtgcttatttgggctcgaaggaaagacatccaggatgatgccaaa
gtgaaaatcacagtactggaagacaaccacccctttgctcagtatcgttatctcgtgaca
gtgtttacaggacaccgccgaggggcagccacaacctccaaggtgactctcaccctctac
ggcctggagggagagagcgagccacaccatctaaccgaccccgacactccagtcttcgag
cggggcggggtggatgttttcctgctctgcactctcttccctcttggggaactgcagagt
attagactgtggcatgataattcagggtacagtccatcctggtatgtgaatcgtgtattg
gtccatgacctggcatgggaccagaaatggtacttcctctgtaactcttggctagccatt
gatattggagagtgtgtcctcgataaagtgttcccagtagctacagaacaggacatgaag
cagtttagcaatctgtttttcatgaagacctccaagggcttccaagacggacacatctgg
tactcggttttcagccgctccccacgaagctccttcacacgagcccagcgcgtgtcatgc
tgcttctcactgctgctctgcaccatgctgacgagcatcatgttctggggagtgccaaag
gatcccgcagagcagaaaatggacttgggcaagatcgagttcacgtggcaggaggtgatg
attggcttcgagagctccctcctcatgttccccatcaacctgctcattgtgcagatcttc
aggaacatccgatcccggccagccacgcaggggagggagaagaagccagggaagagcggg
cgcgtgtcgcccagcctgcctcccacaggcgccctcacccaggctgtctcccttactcca
gaggcagacataaggagaattgccaactcattgtttaaagccctgaagactccatcactc
acctccatatcagaccttggaaaatcaactaatatcaacacacttttggcactggttgag
gacatcatctgccagcagaacagagctgggcacgagttttatgatgacagtaaaaagaag
gatgaccctataattctcacaataggtgctgtggatatgcaagaaaaaacaagcccaact
ccagagaagggaatgtatgagcagctgaaatacagtgactacaaccgctgcttgtacatg
cagctccagcacgtagagatggagctggaactagtggggccccacgcgtttcagatgcct
cagagttacacacaagccgttcggcaggttcagcacatgaagaacctcctggagagccgg
atctgctcagcagcagccagcagcgagagtttctccagggatggcaagaaaggcccttct
tccaaggggctgccctggtggtttgtgtttattggatggttccttgttgcagccaccagt
ggtgtgtctgggttctttactatgctctatgggctgcattacggcaaggaaaactccatc
aagtggctcatctccatggccatttccttctttgaaagtcttttcatcacacagccctta
aaggtgctgggatttgctgccttttttgctctggttctgaagaaggtggagcaggaggat
gaagaaagcactgccattgatgggtctttatctgctccaggtgattcaaatcctctcttt
ggagtcagacgggacagcagaagcaacatctaccagccacctcctgcatcagatgttgag
aaaatgaaagtcaattgcatgaaggagcaaaaggcatttgccctcatcagagaaatccta
gcatatctgggatttttatggatgctgctcttggttgcctatggacagagagatcccaat
tcctactacttaaacaagcacattgagaacagctttacagatggattccaggatatttat
agttaccaggattttttcacatgggcaaatactaccttagtgaaaaatctttatggatca
tacaaaggattcattacagatggcaattccaagctagtgggtagtgcccgaattcgacaa
gtaagagtgaaaggagacacgtgccccgttgctgcccagctccagcgggcgattcgggaa
tgccgtgccccgtacaccttccacagcgaagacacctcaggctacggggaacactggaac
gcttcagcctttgataactcctccgatttgagctcagcgtggcagtaccagagtcaggcc
caactaagagggcacccaatctggggcaaattcgccgtgtaccggggaggaggatacgtg
attcacctgggaacagatcctcacaatgcctccagaattctccagtaccttttcaccaat
gtctggctagacacctttacaagagcagtgttcgtggaatttacagtctacaacgccaac
gtgaatcttttctgcatcgtaactctgatgtttgaaacaaatgctctaggggccttcttc
acaagtgcagagctgcaaagtatccggctttacccatacaccagtagtctccacatcttt
gtcattgcagcagaagtgatttatttcttctttattctctactacatggtaatacaggtg
aaacttatgaagactctgaaatggagatatttccagagcaagtggaatctcctggagctg
gccattatagtgaccagctggagcgccctgtccgtgtttgtgaagcggacgatcctaggg
agccgagacatcagctactaccaggagcacaaagacgactctgtaagctttaacgaaaca
gcaagagctgatgcagttctgggttacctgattgctttcctagtacttctgtccacagta
aaactgtggcatctgctgaggctcaaccccaaactaaacatgatcacttcaaccctacgg
agggcctggggcgatatctctgggttcatcactgttattgcaatcatgttccttgcctat
tccattgccacaaacctgatatttggctggaagctctactcctacaaaactctctttgat
tcggcagagacaatggtcagtcttcagctggggatcttcaactatgaggaggtcttggac
tgcaatccaattctaggctccttcttaattggctcctgcatcattttcatgacatttgtg
gtgctgaatttgttcatttcggtgatcctggttgctttcagtgaggagcagaagcattac
caggcttctgaagaagaggagattgttgatctaatgctaatgaagcttttcagtttcctt
ggggttaaatgcaagaaggaggagaagccaaccactaatgatcaacaggactaa
DBGET
integrated database retrieval system
