Nothoprocta perdicaria (Chilean tinamou): 112949906
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Entry
112949906 CDS
T07556
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112949906 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npd04131
]
112949906 (VPS35)
Membrane trafficking [BR:
npd04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
112949906 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
FerA
KH_GLD-3_1st
Imm5
Motif
Other DBs
NCBI-GeneID:
112949906
NCBI-ProteinID:
XP_025898148
Ensembl:
ENSNPEG00000012820
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MKRCLDKNKLMDALKHASNMLGELRTSMLSPKSYYELYMAISDELHYLEVYLTDEFAKGR
KVADLYELVQYAGNIIPRLYLLITVGVVYVKSFPQSRKDILKDLVEMCRGVQHPLRGLFL
RNYLLQCTRNILPDEGEQTDEETTGDISDSMDFVLLNFAEMNKLWVRMQHQGHSRDREKR
ERERQELRILVGTNLVRLSQLEGVNVERYKQIVLPGILEQVVNCRDALAQEYLMECIIQV
FPDEFHLQTLNPFLRACAELHQNVNVKNIIIALIDRLALFAHREDGPGIPADIKLFDIFS
QQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYPDRVDYVDKVLETTVEIFNKLNLEHIA
TSSAVSKELTRLLKIPVDTYNNILTVLKLKHFHPLFEYFDYESRKSMSCYVLSNVLDYNT
EIVSQEQVDAIMNLVSTLIQDQPDQPAEDPDPEDFADEQSLVGRFIHLLRSDDPDQQYLI
LNTARKHFGAGGNQRIRFTLPPLVFAAYQLAFRYKENSKVDDKWEKKCQKIFSFAHQTIS
ALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAIT
LIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQCRAVSTCAHLFWSGRNTDKNGEE
LHGGKRVMECLKKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENEAVTIQVLNQLIQK
IREDLPNLESTEETEQINKHFHNTLEHLRLRRESPESEGPIYEGLVL
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgatgcttggacaaaaacaagctcatggatgctctgaaacatgcttccaacatg
cttggggagctccggacttccatgttatctccgaagagctattatgagctctacatggcc
atttctgatgaactacactacctggaagtttacctgacagatgaatttgccaaaggaagg
aaagtggcagacctttatgagctagtacagtatgctggaaatattattccaagactatat
ctcctgataacagtaggtgttgtctatgtcaagtcatttccgcagtccaggaaagatatc
ttgaaagacctggtggagatgtgccgtggagtacagcatcctctgaggggcctgtttctt
cgaaactatctcctgcagtgtaccagaaacatcttgccagatgaaggcgaacaaacagat
gaagaaactactggagacatcagtgattccatggattttgtgctgctgaattttgctgag
atgaacaaactttgggtgcggatgcaacaccagggccatagtcgggacagagagaaaagg
gagcgagaaaggcaggaactgagaatccttgtaggaacaaacctggttcgcctcagtcag
ttggaaggtgttaatgtggagcgatataagcagattgttttacctggaatactggagcag
gttgtaaattgtagagatgctttagctcaggagtacctcatggaatgcatcatacaggtt
ttcccagatgaatttcatctccaaaccctgaacccgtttctcagagcctgtgctgagctg
caccaaaatgtgaatgtgaaaaatataataattgctttaattgataggttagctttattt
gcacatcgtgaagatggaccaggcatcccagcagatatcaaactttttgacatcttttcg
cagcaggttgctactgttatacagtctcgccaagatatgccctcagaggatgtggtatct
ttgcaagtttctctcattaacttggcaatgaaatgctacccagatcgtgttgactatgtt
gataaggtgttggaaacaactgtggaaatattcaataaacttaatctggagcatattgca
acaagcagtgctgtttcaaaggagctgacgagacttctgaaaattcctgttgatacttac
aacaatattctgacagttttgaaactaaaacacttccaccccctctttgagtactttgat
tatgaatccaggaagagcatgagttgttatgtgcttagcaacgtattggattataacaca
gaaattgtgtctcaagaacaggttgatgctatcatgaatttggtatccaccctgatccag
gatcaaccagatcagcctgccgaagaccctgatcctgaggactttgctgatgagcaaagt
cttgtgggaagatttattcatctcttgcgttcagatgatcctgaccaacagtatctgatc
ttgaacactgctcggaaacactttggtgcgggtgggaaccagcgtattcgttttacgctg
ccaccgttggtttttgcggcgtatcagcttgcttttcgctacaaggagaactccaaagtg
gatgacaaatgggaaaagaaatgccagaagatcttctcgtttgctcatcaaaccatcagt
gctctgatcaaagcagaactggcagagctgcctctccggctcttccttcaaggagcactg
gctgcaggagaaattggatttgagaatcatgaaactgtggcatatgaattcatgtcccag
gccttctctctgtatgaagatgaaatcagtgattcaaaagcacagctggctgcaatcacc
ttgataattgggacctttgaaaggatgaagtgcttcagtgaggagaaccatgaacctttg
aggactcagtgtgcactggcagcttctaagctacttaagaagccagaccagtgtcgggct
gtgagcacttgtgcccatctgttttggtctggccggaacactgacaagaatggagaagag
cttcatgggggaaaacgagtgatggaatgcctgaaaaaggccttaaagatagcaaatcaa
tgcatggacccttctctgcaagtccagctcttcatagaaattctgaatagatacatctat
ttttatgaaaaagaaaatgaggcggtgacaattcaggttttgaatcagctcatacagaag
attagagaagatctcccaaaccttgagtctactgaagaaacagaacaaattaacaaacat
tttcacaacacactggagcacttgcgtctgaggagggaatcgccagaatctgaggggcca
atttatgaaggtcttgtcctttaa
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