Nothoprocta perdicaria (Chilean tinamou): 112950206
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Entry
112950206 CDS
T07556
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npd03009
]
112950206 (DDX21)
03036 Chromosome and associated proteins [BR:
npd03036
]
112950206 (DDX21)
Enzymes [BR:
npd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112950206 (DDX21)
Ribosome biogenesis [BR:
npd03009
]
Eukaryotic type
Pre-60S particles
Helicases
112950206 (DDX21)
Chromosome and associated proteins [BR:
npd03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
112950206 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
112950206
NCBI-ProteinID:
XP_025898477
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MLYSPEPPRRPDKAERKALKRRAAAAQEQPQPPESGPGEEELPPPKAKRSKKGRKGEPEA
ERQPEEAEQEPEELSAEARQGAFANFPLSPHTVGLLRARGVKYLFPVQVKTFQPIYDGKD
LIAQARTGTGKTFSFAIPLVEKLQSVPQDGKRGRAPKVLVLVPTRELAIQVARDFQNLTR
KLSVACFYGGTPYKAQFDLLKSGIDVLVGTPGRIKDHIQNSKLDLSSVKHVVLDEVDHML
DMGFAEQVEEILGFAYKKDSEDNPQTLLFSATCPRWVYDVGKKYMKGEYEQIDLVGKKTQ
RTATTVEHLAIQCRWSQRPAVLGDIIQVYSGSHGRTIVFCETKKEANELALNASLKQDAQ
SLHGDIPQKQREITLKGFRNGAFEVLIATNVAARGLDIPEVDLVVQCSPPKDVDSYIHRS
GRTGRAGRTGICICFYQRREEDLLKQVEHKAGITFKRIGVPSATEIIKASSSDAKKFLEA
VPPSAVEYFRESARELIEEKGAXDALAAALAHISGASSIQQRSLLNSTAGFVTMVLQCSI
EMRTMSYAWRALKEQLGEEVDAKISAMRFLKGKLGVCFDIPVDELSNIQEQWRNSRRWQL
SVAKELPELEELPHEAANGGFSRFANGGFRKNGRFKGGGHGQSFNRSSR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgctgtatagccccgagccgccccggcgccctgacaaggcggagcgcaaggcgctgaag
cggcgcgccgcggccgcccaggagcagccgcagccgccggagagcggccccggcgaggag
gagctgccgccgcccaaggccaagaggagcaagaagggcaggaagggcgagcccgaggcc
gagcggcagcccgaggaggccgagcaggagcccgaggagctgagcgccgaggcgcggcaa
ggcgccttcgccaacttcccgctctcgccacacaccgtgggtctcctcagggctcgaggt
gtgaaatacctgttcccggtgcaagttaagacgttccagcccatatacgacggcaaagac
ctcatcgcccaggctcgaacggggaccgggaaaaccttttccttcgctattccgctggtt
gagaaactgcagagygtcccgcaggatgggaaaagaggccgtgcaccaaaggtgctggtt
cttgtccccaccagggagctggccattcaggtagccagagacttccagaatctcacragg
aagctttcagtggcttgtttttatggaggaacgccctacaaagcgcagtttgatctcctc
aaaagtggcattgatgttttggtgggaactccaggacggatcaaagaccacattcaaaat
agcaagctggatctttcctctgtaaagcatgttgttttggatgaagttgatcacatgtta
gacatgggctttgctgagcaagtagaagaaatcttaggatttgcttataaaaaagattct
gaggataatcctcaaacgctgctgttttctgcaacttgtccacgttgggtatatgatgta
gggaagaagtacatgaaaggtgaatatgagcaaattgacctggttggaaagaagactcaa
aggactgccacaaccgtggagcacctggctatacagtgtcgctggtctcagaggccggcg
gttcttggggacatcattcaggtctacagcggcagccacgggcggaccatcgtcttttgt
gagaccaagaaggaggcaaatgagctggctctgaatgcttcgctcaaacaggatgcccag
tcactgcatggtgacattccacagaaacagagagaaatcaccttaaaaggcttcagaaat
ggtgctttcgaggttcttattgcaacaaacgtagctgcccgtggtttggatattcctgaa
gttgaccttgttgtacagtgttcacctccaaaggacgttgattcctacatccatcgttct
ggccgcacgggccgtgctggccgcacagggatctgtatttgcttctatcagagaagagaa
gaagacctgctgaagcaggtggagcacaaagcggggattacattcaagcgtataggtgtt
ccttctgccacagagataatcaaagcttcaagtagtgatgccaagaagtttttggaggcg
gttcccccctctgcggtagagtacttcagagagtcagctcgagagctcatagaggagaaa
ggggccrtcgatgccctggccgcagctctagctcatatttcaggagcatcttccattcag
cagcgctctttactcaactcaacagcgggctttgtgaccatggtgctgcagtgctccata
gagatgcgcaccatgagctacgcgtggcgagcgctgaaggagcagctcggcgaggaggtg
gatgccaaaatatccgcgatgcgtttcctcaagggcaagctgggcgtgtgctttgatatc
cctgtggatgaactaagtaacatacaggagcagtggcggaactcgcggcgctggcagctg
tccgtggccaaggagcttcccgagctggaggagctcccgcacgaggcagccaacggcggc
ttctccaggttcgccaacggcggcttcaggaagaacggcaggtttaagggcggcggccac
ggacagagctttaaccggtcctcccgctga
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