Nothoprocta perdicaria (Chilean tinamou): 112950207
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Entry
112950207 CDS
T07556
Name
(RefSeq) storkhead-box protein 1-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npd03009
]
112950207
03036 Chromosome and associated proteins [BR:
npd03036
]
112950207
Enzymes [BR:
npd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112950207
Ribosome biogenesis [BR:
npd03009
]
Eukaryotic type
Pre-60S particles
Helicases
112950207
Chromosome and associated proteins [BR:
npd03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
112950207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
Stork_head
ResIII
CMS1
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
112950207
NCBI-ProteinID:
XP_025898478
LinkDB
All DBs
Position
Unknown
AA seq
1411 aa
AA seq
DB search
MNPLPQSQFVPLAEALCCTVSQMNANHVKATQETLTEQLVKSYPGIAVPSHETVYXTLST
LIKDRKIYHTGEGYFTVTPSTYFISHNTTEATKRGPLEGSCCSSRSITYLVTIERCADLT
KENIPTLSRYRSCRCFPDRNTLHEQRHQQLRRSEPNXGGKNGCKELKSSIQDEMVSACGE
THSWDTIKLLVSAKEKLKCKRFGLGLFCRKKGRKEYSTFSAQFPPKEWPVRDEDDLDNIP
RDIEHEIIKRINPMLTVENLIKHTVLMQRLEEQKTCFSKGTLAEPLALRQNHLAKEPAQK
AQSKAAGHGRKSKPSKEKPVSRSKRKSQIQGLTSHSEKPEEHLSLYDTNPKLFXTAAASQ
GMYKKQIKNPFQGLSWRHDLNVKGNEGQTKSQPKPRARKQQRRSLDSSKTFGCEAELXAE
KQADKAKPNKLLHVNRSSLQLSKDSLSEEGRHLQGSTLQTDDKCKYFMESRISEGSICRQ
TAPKKPVAAQKSPRRYTEDDVVCKGDAKYSLNAKDEHSKYKAHSACKLLDQTSNTFQNVS
LSNYTTRANLLHENSVKYRQKTDKRKEFVSESDCRNRSGSVKLGGEGLAHDCHLVHQKAR
DGNTCGSLCVGDXFERGEAGHLHPGCAFSGAKGCRRAVQKAQKTPMCVENVMVNVHPAQH
CPAVSQCDSREHQYEQCSSLAEPRDGPKVHEETGITKSCPCSPVLLTRHRKEEETGLRAC
VKASAVTDFCKVPGALQSCSCEMGEELECSALGPQAKERRNSVVKNGRCLNSACAVIAGQ
NHSEGTENYSITGDSGIDSPRTLSLTPNNSAILDGMKRQSFLQNFELTEEQKEGAFSNFS
ISKGTIQLLQARGVTYLFPVQVKTFHPVYSGKDVIAQARTGTGKTFSFAIPLIEKLQADT
QERRRGRSPKVLVLAPTRELANQVAKDFKDITRKLTVACFYGGTPYNGQIDLIRSGIDIL
VGTPGRIKDHLQNGKLDLSKVKHVVLDEVDQMLDMGFAEQVEDILRVAYKKDSEDNPQTL
LFSATCPHWVYDVAKKYMKSKYEQIDLIGRRTQKAATTVEHLAIECHWSQRAAVIGDVIQ
VYSGSHGRTIVFCETKKEANELALNASIKQDCQSLHGDIPQKQREITLKGFRNGAFKVLV
ATNVAARGLDIPEVDLVVQGSPPKDVESYIHRSGRTGRAGRTGICICFYQRKEENQLRYV
EQKAGITFKRVGVPTATDIIKASSKDAIRCLDSVPQTAIEYFKESARWLIQEKGPVNALA
AALAHISGATSIEQRSLLNSDAGFVTMILRCSEEINNMSYAWRSLREQLGDDIDRKVSRM
CFIKGRMGVCFDIPAADQKEIEGRWEDSKQWRLCVATELPELLEAPRGGGGGGGGGGRGF
SSSRNGRRGGSGRNRFRSRGQKRSFDRAFDR
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctctcccccagtcacagtttgtccccctggctgaagctctttgctgcaccgta
tcgcagatgaacgcgaatcacgtgaaggctacgcaggaaacgctgacagagcaactcgtg
aaaagctatccaggcattgctgttccctcccacgaaactgtgtatcmcaccctcagcact
ctaattaaagacaggaagatctatcacacgggagagggctacttcacagtcacccctagc
acctacttcatcagccataacaccaccgaagccacaaaaaggggcccactggagggcagt
tgctgctcatcacgctccatcacttaccttgtcaccatagagcgctgtgcagacctaacc
aaggaaaacattcctacactatcccgctacagatcctgccgttgttttcctgacaggaat
acgctccatgaacaaagacatcagcagcttcggaggtctgaacctaatgrgggaggtaag
aatggctgcaaggaactgaagtcttcaattcaagacgaaatggtgtcagcgtgtggtgaa
acccattcctgggacaccatcaaactcctggtatcagcgaaagaaaaactgaaatgtaaa
agatttggccttggccttttttgcaggaaaaaaggcaggaaagagtattccaccttctca
gcccagtttcctcccaaggagtggccagtgagggacgaagatgacctggataatattcca
cgtgatatcgagcatgaaatcatcaagcgcatcaaccccatgctaacagttgagaatctg
attaaacacacggtactgatgcagaggctggaggagcagaaaacgtgttttagcaaaggg
accttggctgaaccgttagcactcaggcaaaatcatctcgcaaaggagcccgcgcagaag
gcacaaagtaaagcagcagggcatggcaggaaaagcaaaccaagcaaggagaagccagtt
agcagaagcaagaggaaatctcaaatacaagggctaacatcgcacagtgagaaaccagag
gagcatctgtcactgtatgatacaaacccaaagctgtttsacacagctgcggcctcccag
ggcatgtataaaaagcaaattaagaacccgtttcagggcctgtcgtggagacacgacttg
aacgtgaaggggaacgaaggtcagactaagagtcagcccaagcccagggctcgaaagcaa
caaaggaggtctctggattcctcaaaaacctttggatgtgaagctgaactggytgctgaa
aagcaggctgacaaagccaagccaaataaattgctccatgttaatagatcttctctccaa
ctgagcaaagacagcttaagcgaagaaggtcgtcatctgcaaggcagcactttgcaaaca
gatgacaaatgtaaatactttatggagagcaggatttctgaaggcagcatctgcagacaa
acagccccaaaaaagcctgtggctgctcaaaaatcccctcgtcgttacactgaagacgat
gttgtgtgcaaaggagatgcaaaatactcattaaatgcaaaagatgagcactccaagtac
aaagctcactctgcatgtaaattgctagatcaaacatcaaacacgtttcaaaatgtcagc
ctttcaaattatacaacccgtgctaacctgctacacgaaaacagtgtgaaatacagacaa
aagactgataaaaggaaggaatttgtatctgaatccgactgtaggaaccggtctggatca
gtgaagctgggaggtgagggacttgcccatgactgccacctggtgcaccaaaaagctcgt
gatggcaacacgtgtggctccttgtgtgtgggtgacmattttgagcgcggtgaggcaggg
cacttgcaccctggctgtgctttttcaggtgcaaagggctgccgtagggccgtgcaaaag
gcacaaaagacacctatgtgtgtggaaaacgtgatggttaatgttcatccagcccagcat
tgccccgctgtaagccaatgtgactcccgagagcaccaatacgagcaatgttctagtctc
gctgaaccaagagatggcccaaaagtgcacgaggaaacaggtatcactaaaagctgtccc
tgcagcccagtgcttctgacgaggcacagaaaggaagaggaaactggtctccgtgcatgt
gtgaaggcttcagctgttacagacttctgcaaggttcctggcgctttgcagagctgcagc
tgcgagatgggagaagagctggagtgctctgccctgggcccgcaggccaaagaaaggaga
aactccgtggtgaaaaacggtcgctgtcttaacagtgcttgtgctgtgattgcagggcag
aatcactcggaaggaacagaaaattacagcattacyggagacagcggtattgactcccca
agaacactgagtctgacacctaataattctgctatcttagatggaatgaaaagacaaagc
ttcctgcaaaattttgagttgaccgaggaacagaaggaaggggctttctccaatttttct
atttccaaagggaccattcagctgcttcaggctcgaggagtgacgtacctgttccccgtg
caagtaaagaccttccacccggtgtattcrggcaaggatgtcattgctcaggcacgaact
ggaacggggaaaacgttctcctttgctattcccttaattgaaaagctgcaggcggacacc
caggaaagaagaagaggccgttcaccaaaggtattagttcttgctccaacaagagagctg
gcaaaccaggttgccaaagacttcaaggacatcacaagaaaactcacagtagcctgtttt
tatggaggaactccatataatgggcaaatcgatctcatcagaagtggcattgatattttg
gtgggcacgcctggtcgaatcaaagaccaccttcagaatggcaagctggaccttagcaag
gtgaaacacgtggtcctggatgaagtcgaccagatgctggacatggggtttgccgagcaa
gtggaggacatattacgagttgcgtacaagaaggattctgaagacaatccccagacgcta
ctgttttctgcaacttgcccacattgggtgtatgacgtagcwaagaaatacatgaagtcc
aaatacgagcagattgaccttattgggagaagaactcagaaggctgctacaacagtagaa
catttggccatagagtgtcactggtctcagagagctgcggttattggggatgtcattcag
gtctacagcggcagccacgggcggaccatcgtcttttgtgagaccaagaaggaggcaaat
gagctggctctgaatgcttccatcaagcaggactgccagtcgttgcacggagacattcct
cagaagcaaagggagataacactgaagggttttagaaatggtgcatttaaggtcctggtg
gcgacaaatgtggctgcccgtggtttggacatccccgaagttgacctggttgtgcaaggg
tcgcccccaaaggatgtggaatcctacatccatcgttccggacgtacaggccgagctggc
cgaactgggatctgcatttgtttttatcagcgaaaggaagaaaaccagttaagatacgtg
gagcaaaaagcgggcattacatttaagcgtgttggcgttcctactgctacagatataata
aaagcttccagcaaagatgccatcaggtgtctggactcagttcctcagactgctattgag
tacttcaaggagtctgctcggtggctgatacaggagaaggggcctgtgaacgccctggct
gcagctctcgcccacatttcaggcgctacttccattgagcagcgctccctgctcaactcg
gatgctgggtttgttacgatgatactacgctgctctgaagaaataaacaacatgagttat
gcgtggcgaagtctgcgagagcagctgggggacgatattgacaggaaggtcagcagaatg
tgcttcatcaagggaagaatgggtgtgtgcttcgatattcctgcagcagaccaaaaggaa
atagagggccggtgggaggactcgaagcagtggcgyctgtgtgtggccaccgagctgccc
gagctgctggaggcgccgcgaggaggaggaggaggcggtggcggcggcggccggggcttc
tccagctcccgcaacgggcggcgcggaggctccggcaggaaccgcttccgaagccgcggc
cagaaacgaagttttgacagagcctttgatcgctag
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integrated database retrieval system
