Nothoprocta perdicaria (Chilean tinamou): 112950212
Help
Entry
112950212 CDS
T07556
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112950212 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npd04121
]
112950212 (HERC4)
Enzymes [BR:
npd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
112950212 (HERC4)
Ubiquitin system [BR:
npd04121
]
Ubiquitin ligases (E3)
HECT type E3
112950212 (HERC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RLD
HECT
RCC1
RCC1_2
Alsin_RLD
Motif
Other DBs
NCBI-GeneID:
112950212
NCBI-ProteinID:
XP_025898484
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVLEPRKSGFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPG
TEECVRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTS
PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYAPTLLKSLR
TQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSVVTQIT
CGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWLPYTNQCPLGADSEE
FYCVKKIFSGGDQSFAHYSNPQNMVPPDDFRYPDFLKQIWTVNEAFIQKLLSFPSGRLPA
EIANEIDGTFSSAGCLNGSFLALSNDDHYKTSARFSGVDMNAARLLFHKLIQPDHAHISQ
QVAASLEKNLIPKLTSSLPDVEALRLYLTLPECPLMSDANNFTTLAIPFGAAILNLEKAP
QKVLENWWSVLEPPLFLKIVELYKDVVVHLLKLYKIGIPASERRIFTNFLHTAFRVLEIL
HKVNERGQVIQYDRFYIHEIPDLIDIRNDYFNWVQQQVFGMLTDIPVTICTYPFVFDAQA
KTTLLQTDAVIQMQMAVDQAHRQNLSSLFLPVFESVNPCLILMVRRDNIVGDAVEVLRKT
KNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEESRLIWFSDKTF
EDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKKLLNKKPSLDDLKELMPDVGRSMQQLL
DYPEDDIEEIFCLNFTITVENFGTTEIKELVPNGADIPVVKQNRQDFVDAYVDYIFNKSV
ASLFSAFHAGFHKVCGGKVLQLFQPSELQAMVIGNTNYDWKELEKNTEYKGEYWADHPTI
KIFWEVFHELTLEKKKQFLLFLTGSDRIPILGMKCLKLVIQPTGGGEGYLPVAHTCFNLL
DLPKYTDKKTLKSKLIQAIDHYEGFSLV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgttggggaaacgcatcttttggacagcttggattgggtggaattgatgaagag
attgttttagaacctcgcaaaagtggctttttcttaaataaaagggtccgagatgtgggc
tgtggactcagacatactgtttttgtcctggatgatgggacagtttatacgtgtggctgc
aatgatctaggacaactagggcacgagaaagccaggaagagacccgagcatgttggtgca
ctggatgcccaaaatattgtagctgtatcatgtggagaagctcacacgctcgcattaaat
gacaagggtcaggtatatgcatggggcttggctactgatggacagcttggcttgcctgga
acggaggagtgcgtcagagtacccagaaatattaaaagcttatcagagatccaaattgtg
caagttgcttgtggttattatcactcacttgcactctcaaaaggaagtgaagtattttcc
tggggacaaaataaatatggccagctgggtttaggttatgaatataaaaagcaaacatca
ccacatgtaattaagtctctgctgggaatcccttttgcacaaattgcagcaggaggagct
catagttttgtactaactctttctggagccatttttggatggggacgaaacaaatttgga
cagttgggtcttaatgatgataatgacagatatgctcctaccctgctgaagtcgttgaga
actcagaaagttgttcatatatgttgcggagaagatcatactgctgctcttacaaaggaa
ggtggggttttcacatttggagctggaggctatggtcagttgggtcataactctaccagc
cacgagataaacccaaggaaagtttttgaacttatgggaagtgttgtcacacagatcact
tgtggaaggcagcacactactgcatttgttccttcatctggaagaatatattcttttgga
cttggaggtaatggacaattaggtacaggaacaacaagtaataggaaaagtccattcaca
gtaaaaggaaactggcttccttacactaatcagtgcccactaggtgcagacagtgaggaa
ttttactgtgtaaagaaaattttctctggtggggaccaaagttttgcacactactctaat
ccacagaatatggtaccaccagatgatttcaggtatcctgactttttgaagcagatttgg
actgtgaatgaagcgtttattcagaaattgttgtctttcccatccggaagacttcctgcg
gagatagctaatgaaatcgatggaacgttttcctcagctgggtgcctgaatgggagcttt
ttggctttgagcaatgatgatcattacaaaaccagtgctcgattctcaggggttgatatg
aatgctgctagactgctatttcacaaacttatacagcctgaccatgctcatatatcacaa
caggttgcagctagtttggaaaagaacctcattcccaaattgacaagctccttaccagat
gttgaagccttgaggctgtatctcacactaccagagtgcccactgatgagtgatgcaaat
aattttacaacgttagctattccttttggagcagctattctgaacctagaaaaagctcct
caaaaagttcttgaaaactggtggtctgtacttgaacctccgttgttcctcaagatagtg
gaactctacaaggatgtcgtagtgcacctcctaaagctctacaagattggcattcctgct
tctgaaagaagaatatttaccaactttctacacactgctttcagagttctggaaattctg
cataaagtaaatgaaagaggacaagttatacagtatgacagattttatattcatgagata
ccagatttgatagatatcagaaatgactatttcaactgggtccagcagcaggtatttgga
atgttaacagatattcctgttacaatttgcacgtacccatttgtatttgatgcccaagca
aagacgactctcttgcaaacagatgcagtcatacagatgcagatggctgttgatcaggct
cataggcagaatttgtcatctctctttctgcctgtgtttgaatctgtsaacccatgcctg
atattaatggtgcgaagagacaatattgtgggagatgctgtggaagtcctaaggaaaacc
aagaacgtagactacaagaaacccctcaaggttatttttgtaggggaagaagctgttgat
gctggaggtgttcgcaaagaattttttttgcttatcatgagggagctkctagatcccaaa
tacggcatgttcagatactatgaagagtcgcgactgatctggttctcagataagactttt
gaagacagtgacttgttccatttgattggtgttgtctgtggcctagcaatatataacttt
actatcgtagaccttcatttccctttggctttgtacaaaaagctgctgaataaaaagcca
tctctggatgatttaaaagagttgatgccagatgttggcaggagcatgcaacagttactg
gactatccggaggatgacatagaggaaatattttgtcttaattttactattactgtggaa
aattttggtacaacagaaattaaagagcttgttcctaatggtgctgacattcctgtagtc
aaacaaaataggcaagattttgtggatgcatatgtggattacatcttcaataaatcagtg
gcgtccttgttcagtgcattccatgcaggcttccacaaagtgtgtggaggcaaagttctt
cagctcttccagcccagcgagctgcaggcaatggtgattgggaacactaattatgattgg
aaggagttggagaagaatacagaatacaaaggagaatattgggcagaccatcctacaatt
aaaatattctgggaggtttttcatgagttgaccttggagaagaaaaagcagtttctattg
tttctgacaggcagtgatcgtattccaattcttggaatgaagtgtcttaaactagtcatc
caaccaacaggaggtggagaaggttatcttccagtagctcacacttgctttaatcttctt
gatcttccaaaatacacagataaaaaaaccctaaaatctaagctgatccaggctatagat
cactatgaaggtttcagtctagtataa
DBGET
integrated database retrieval system
