Nothoprocta perdicaria (Chilean tinamou): 112950244
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Entry
112950244 CDS
T07556
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112950244 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npd03041
]
112950244 (USP39)
Spliceosome [BR:
npd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
112950244 (USP39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
Synaptobrevin
UCH_1
DUF3040
INV_N
Motif
Other DBs
NCBI-GeneID:
112950244
NCBI-ProteinID:
XP_025898518
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MGDIPIPWGAQGSVWAGLQRCQDEAEAVVQLMQQNLGKALEREGKLSELDDRATELRAMG
QTFTRTTRAAVQKSRNGRRRRRLLLAVALLIGLVVLILIVALVLASSRTRWQSARRSAGS
SGLRAHTRCVTSSALSACRGARQCRPLPHGGPTAAPRAPRPLTWCTTTAVTLPSSPSYSR
QKSRGPRASPPPGLRDGPPAXTAALSGASGGPVRYGRFDPEDQRSRHCPYLDTINKSVLD
FDFEKLCSISLSHINVYACLVCGKYFQGRGLRSHAYIHSVQCSHHVFLNLHTLKFYCLPD
NYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYAN
AVLQALSNVPPLRNYFLEEDNYRGIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPH
EMLQAVVLCSKKNFQITKQGDGVDFLSWFLNALHSALGSTKKKKKTIVTDVFQGSMRIFT
KKLPHPDLPAEEKAQLLLNAEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFS
ILAKFNGVTEKEYKTYKENFLKRFQLTRLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITN
VDLREYLSEEVQAAHSHTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDI
LPQMITLSEAYIQIWKRREEDETNQQGA
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgggggacatccctattccgtggggagcccaggggtctgtgtgggccgggctgcagcgg
tgccaggacgaggcggaggccgtggtgcagctcatgcagcagaacctgggcaaggcgctg
gagcgcgagggcaagctcagcgagctggacgaccgcgccaccgagctgcgcgccatgggc
cagacgttcacgcggacgacccgggcggcggtgcagaagagccggaacgggcggcgccgc
cggcgcctgctgctcgccgtggcgctgctcatcggcctcgtcgtcctcatcctcatcgtg
gcactggtgctggcctcgtcgcgcacgcgctggcagagcgcgcggcgcagcgcgggctcc
agcgggctgcgggcgcacacgcgctgcgtcacctcctcggcgctgtccgcctgccggggc
gcccgtcagtgccgcccgctgccccacggcggccccacggcggccccgcgggcgccccgg
ccgctcacctggtgcacgaccacggccgtgacgctcccgtcgtcgccctcgtactcgagg
cagaagagccggggcccgcgggcgtccccgccgccggggctccgcgatggcccccctgcc
gycaccgccgccctcagcggcgcctccggcggccccgtgcgttacggccgcttcgacccc
gaggaccagcggagccgccactgcccctacytggacaccatcaacaagagcgtgctggac
ttcgacttcgagaagctctgctccatctcgctgtcgcacatcaacgtctacgcctgcctc
gtgtgcggaaagtacttccagggccgcgggctcaggtcgcacgcctacatccacagcgtg
cagtgcagccaccacgtcttcctcaacctgcacacgctcaagttctactgcctgcccgac
aactacgagatcatcgactcgtcgctcgaggacatcacgtacgtgctgaaacccaccttc
accaagcagcagatcgccaacctggacaagcaggccaagctgtcgcgggcgtacgatggc
accacgtacctgccgggcatcgtggggctcaacaacatcaaggccaacgactacgccaac
gccgtgctgcaggccctctccaacgtgccgccgctgaggaattacttcctggaggaggac
aactacaggggcatcaagcggccgccgggggacatcatgttcctgctggtgcagcgcttc
ggggagctcatgcgcaagctctggaacccgcgcaacttcaaggcgcacgtgtcgccccac
gagatgctgcaggccgtggtgctctgcagcaagaagaacttccagatcaccaagcagggc
gacggggtcgactttctctcctggttcctgaacgcgctgcactcggcgctgggcagcacc
aagaagaagaagaagaccatcgtcaccgacgtcttccagggctccatgcgcatcttcacc
aagaagctgccgcacccggacctgccggccgaggagaaggcgcagctgctgctcaacgcc
gagtaccaggagaccatggtggagtccacgttcatgtacctgacgctggacctgcccacg
gcgccgctctacaaggacgagaaggagcagctcatcatcccgcaggtgccgctcttcagc
atcctcgccaagttcaacggcgtcaccgagaaggagtacaagacctacaaggagaacttc
ctgaagcgcttccagctcaccaggctgcccccctacctcatcttctgcatcaagcgcttc
accaagaacaacttcttcgtggagaagaacccgaccatcgtcaacttccccatcaccaac
gtggacctgcgcgagtacctgtcggaggaggtgcaggccgcgcacagccacaccacgtac
gacctcatcgccaacatcgtgcacgacgggaagccctccgagggctcctaccgcatccac
gtgctgcaccacggcaccggcaagtggtacgagctgcaggacctgcaggtgaccgacatc
ctgccgcagatgatcacgctctccgaggcctatatccagatctggaagcggcgcgaggag
gacgagaccaaccagcagggagcctga
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