Nothoprocta perdicaria (Chilean tinamou): 112950366
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Entry
112950366 CDS
T07556
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03013
Nucleocytoplasmic transport
npd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112950366 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
112950366 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npd03019
]
112950366 (THOC5)
03041 Spliceosome [BR:
npd03041
]
112950366 (THOC5)
Messenger RNA biogenesis [BR:
npd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
112950366 (THOC5)
Spliceosome [BR:
npd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112950366 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF2542
Motif
Other DBs
NCBI-GeneID:
112950366
NCBI-ProteinID:
XP_025898664
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHE
EIELVSVEEFYREAPAEISRPAVTLGEPHQQTLARLDWELEQRKRLAEKYKECLANKEKI
LKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYEIARHLPPPLYVLFVQA
SAYGQACDKKLVVAIEGSVEEAKALYKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDD
KRKEMLKRHPLCVTLDLKCKDENVLQLTFYYLLNLNIMTVKAKVTTAVELTTPVSAGDLL
SPDSLLSCLYPGDHGKKTPNPANQFQFDKVGIVTLSDYMTELGHPYVWVQKLGGLHFPKE
QPQHTVPADNLLSASHMEMTVKLLRARLQSRLALHKQFASLEHGVVPVSSECQHLFPAKI
VSRLVKWAAISYEEYAELPYTKDVLEAGLAEDTHLYYMALIERGTAKLQAAVVLNPGYST
LPPIFSLCLNWKGERTGGIDDNIRAMESEVNVSYKELWGPKPGYQLLTNQLQRLCMVLDV
YLETEAHDPSVEGPKEFPQEKMCLRLVRGPTRMKPFKFNYPQGFFSHR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcaagaaactcaaccgcctggctcacatccgcctcaagaaagggagagaccag
acccacgaggccaagcagaaggtggacgcctatcacctgcagctgcagaacctgctctac
gaggtgatgcacctgcagaaggagatcaccaagtgcctggagttcaagtcgaagcacgag
gagatcgagctggtgagcgtggaggagttctaccgggaggcgccggccgagatcagccgg
ccggcggtgacgctgggcgagccccaccagcagaccctggcccgcctcgactgggagctg
gagcagcgcaagcggttggccgagaaatacaaggagtgtctggccaacaaggagaagatc
ctcaaggagattgaggtgaagaaggaatatctgagcagcctgcagccccggctcaacagc
atcatgcaggcgtcgctgccggtgcaggagtacctgttcatgcccttcgaccaggcgcac
aagcagtacgagatcgcgcggcacctgccgccgccgctctacgtgctcttcgtgcaagcg
agcgcctacgggcaggcctgcgacaagaagctcgttgtggccattgaggggagcgtggag
gaagccaaggccctgtacaagccgcccgaggactcgcaggatgacgagagcgattcggac
gcggaagaggagcagaccacgaagcggcgccggcccacgctgggcgtgcagctggacgac
aagcgcaaggagatgctcaagcgccacccgctctgcgtcaccctcgacctgaagtgcaaa
gatgagaacgtgctccaactgaccttctattacctgttgaacctcaacatcatgacggtg
aaagccaaggtgaccacggctgtcgagctgaccacccccgtcagcgccggagacctgctg
tccccagattccctgctgagctgcctgtacccgggagaccacgggaagaaaacgcccaac
cctgccaaccagttccagttcgataaagtgggcatcgtcaccttgagcgactacatgacg
gagctggggcacccctacgtgtgggtgcagaagctgggcggcctccacttccccaaggag
cagcctcagcacacggtgcccgcggacaacttgctgagcgccagccacatggagatgacg
gtgaagctgctgcgcgcgaggctgcagtcgcgcctggccctgcacaagcagttcgcgtcg
ctggagcacggcgtggtgcccgtgtccagcgagtgccagcacctcttccctgccaagatc
gtctcacggctggtcaagtgggcggccatctcctaygaggagtacgcggaactgccctac
accaaggacgtgctggaggccggcctggctgaggacactcacctctattacatggcgctc
attgagcggggcacagccaagctccaggccgccgtggtgctcaaccccggctactccacc
ctgccgcccatcttcagcctgtgcctcaactggaagggggagcgcaccggcggcatcgac
gacaacatccgggccatggagagcgaggtgaacgtgagctacaaggagctgtgggggccc
aaacctggctaccagctgctcaccaaccagctgcagcgcctctgcatggtgctcgacgtc
tacctggagacggaggcgcacgaccccagcgtggaggggcccaaggagttcccccaggag
aagatgtgtctgcgcctcgtcaggggacccacccgcatgaagcccttcaagttcaactac
ccccagggcttcttcagtcaccgctga
DBGET
integrated database retrieval system
