Nothoprocta perdicaria (Chilean tinamou): 112950377
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Entry
112950377 CDS
T07556
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03030
DNA replication
npd03410
Base excision repair
npd03420
Nucleotide excision repair
npd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112950377 (RFC5)
03410 Base excision repair
112950377 (RFC5)
03420 Nucleotide excision repair
112950377 (RFC5)
03430 Mismatch repair
112950377 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npd03032
]
112950377 (RFC5)
03036 Chromosome and associated proteins [BR:
npd03036
]
112950377 (RFC5)
03400 DNA repair and recombination proteins [BR:
npd03400
]
112950377 (RFC5)
DNA replication proteins [BR:
npd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
112950377 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
112950377 (RFC5)
Chromosome and associated proteins [BR:
npd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
112950377 (RFC5)
DNA repair and recombination proteins [BR:
npd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
112950377 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
112950377 (RFC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_22
AAA_16
AAA_11
AAA_assoc_2
AAA_24
AAA_14
DEAD
AAA_lid_RFC1
RuvB_N
ResIII
DUF815
nSTAND_NTPase5
AAA_5
AAA_19
PhoH
AAA_30
TIP49
TniB
ATPase_2
AAA_7
DNAX_ATPase_lid
nSTAND3
AAA_25
bpMoxR
Thioredoxin_6
Mg_chelatase
AAA_3
IstB_IS21
NPHP3_N
Hydantoinase_B
Motif
Other DBs
NCBI-GeneID:
112950377
NCBI-ProteinID:
XP_025898678
Ensembl:
ENSNPEG00000014519
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
GGAGGRPRNLPWVEKYRPQALADLVSHQDILSTIQKFISEDRLPHLLLYGPPGTGKTSTI
LACARQLYKDREFNSMVLELNASDDRGIDIVRGPILSFASTRTIFRKGFKLVILDEADAM
TQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLQHVI
EEEKVDVTEDGMKALVTLSSGDMRRALNILQSTSMAFGTVTEENVYTCTGHPLKCDIANI
LDWMLNQDFSTAYRKIAELKTLKGLALHDILTEIHLLVHRVDFPPSIRIQLLSKMAEIEY
RLAAGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
ggcggcgcgggggggcggccccgcaacctgccctgggtggagaagtaccggccgcaggcg
ctggccgacctcgtgtcccaccaggacatcctcagcaccatccagaagttcatcagcgag
gaccgtctgcctcacctcctgctctacgggccgcctggcactggcaagacctccaccatc
ctcgcctgcgcccggcagctctacaaggaccgggaattcaactccatggttttagagctg
aacgcctctgatgacagagggatcgatatagtcagagggcccatcctgagttttgccagc
accaggaccatcttcaggaaaggcttcaagctggtratcctggatgaggcagatgccatg
acacaggatgcccagaacgccctgcggagagtgatcgagaagttcacggagaacacccgc
ttctgcctcatctgcaactacctgtccaagatcatcccggccctgcagtcccgctgcacg
cgcttccgcttcggccccctcaccccggagctcatggtgccccggctgcagcacgtcatt
gaggaggagaaggtggacgtgacggaggacgggatgaaggccctggtgaccctctcgagc
ggcgatatgcgcagagccctcaatatcctgcagagcaccagcatggccttcgggacggtg
acggaggagaacgtgtacacgtgcaccggccaccccctcaagtgtgacattgccaacatc
cttgactggatgctcaaccaggacttttccaccgcctaccgcaaaatcgccgagctgaag
acgctgaagggcctggccctgcacgacatcctcaccgagatccacctgctcgtgcacagg
gtcgacttcccgccctccatccgcatccagctgctgagcaagatggcagagatcgagtac
cggctggcagcaggcacgagcgagaagattcagctgagctccctcatcgcagctttccag
gtcaccagggacctgatcgtggccgaagcctag
DBGET
integrated database retrieval system
