Nothoprocta perdicaria (Chilean tinamou): 112950470
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Entry
112950470 CDS
T07556
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npd03036
]
112950470 (JMJD1C)
Chromosome and associated proteins [BR:
npd03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
112950470 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
CUB
zf-C5HC2
C1_2
FYVE
Motif
Other DBs
NCBI-GeneID:
112950470
NCBI-ProteinID:
XP_025898792
LinkDB
All DBs
Position
Unknown
AA seq
2520 aa
AA seq
DB search
MAVETRPELVGKRFLCVGGGEEPPESGRWRAGVIRAVSQRDSHSAELAVYVEFDDLEWEK
REWVKVYEDFATFLVEYQLVWAKRKDPSQTQGSKSKQIQWPALTFKPLVGKSVYNAVTAV
EFLVDKQLDFITEDSAFQPYQDDVDSLNPVLRDNPQLHEEVKAWVKEQKVQEIFMQGPYS
LNGYRVRVYRQDSATQWFTGIITHHDLFTRTMVVMNDQVLEPQNVDPSMVQMTFLDDVVH
SLLKGENIGITSRRRSRSNQNSNTVHGHFTRAQANSPRPAMNPQSAAPKQPSQQQQQQQP
PQPQRSTRPNKRKGSDSSAPDEEKMKEERYDYIGRGEHPKAKNKHFLSKRRKPEEDEKKL
NMKRLRTDNISDYSESSDSEISNKRLTDSSSEQNSENELKGKNTSKINGEEGKSQTIEEL
QEQTLPDRQSPWREIQEDKKREETERLKSSVLDQQEQSSLHAAEQPTPYEQNAKDPHVQE
CSAEKHHTVELKNEQFVPRPPTPKCGVDITNVNSSEKESQDTAASTFGLQTVQKTESQSS
DLKQQFANANFLETRKQETDQSWVSNVVNKTSLIQPGVVKNLPVTEHLNPEKEKVPHGSF
IPSLNVASLAEESKLRKQSPVPDSVKSKPSASVDHPKTKSPDVKPKFTQSSDTVKSKVSS
QNSHATGLTRSANKSEHDLPRSSFHPVPARVSALETTKSPLIIDKNEHFTVYRDPTLIGQ
EAGANHISPYLHQHNYPLHSSSHRTCLNPSAHHPALSGSSHLLSGSSTQTPLSAINTHPL
STASHPSVHHPHLLPAVLPGVPAASLLGGHPRLETAHASSLSHLALAHQQQQQMLQHQSP
HLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPETPVNAEASLRRNTPS
PWLHQPAPVTSADGLGLLSHIPVRPSSADPLRPLKLTTHSSPPLPKSMAEHHKEELERKA
FIEPLRSVTTAPIKTELEPSRAQAAKESHMHRHFTDPLLSQLPRAPPETGERLSKYKEEH
RRILQESIEVAPFTAKMKALEGERENYSRVTSLSSSPKSHSVKYDKDAERSVSELYKMKH
SVPPSLPQSNYFTTLSNSVVNEPPRSYPSKEASNAYVDKQTNCPSTAASPQALPSYISSL
SKPPPLIKHQPEGEGSASKAAEQLSQSVQSHSVASFRSDSRSPTQLSVSSSNTLRSMPAL
HRAPVFHPPVHQNLEKKESSYSSLSPPTLTPVQPVNAGGSKIQELQKPPTLVPEPKEAQT
VYKGVSEQNLSEMWKANNAPNSEKVDWHAERTSGKSQSATASVIVRPPSRTKHESAAVMQ
PPAKERASERASAVTNQTDCPKTAEARETGRVILPNMNSDGARTHYEKKFPAVSQGSLAS
AVAPATAMTCSTKTDVTASAATTTSVSSWGASQVTCSSSSAAGACAPPEGARARTATAAP
GSAKGAGAAQPFCPSXDFVHLKKHKAALAAAQFRSSNASEAEASAAKSQTTSASLSGDAA
IVCNTINKANSVGSGQTAQTSQPNYHTKLKKAWLTRHSEEDKNTNKKENSGNSVSEIIKP
CTVNLIASTSNDLQNNIDSKILAEKFVKEDKHPRRKAKRTYESGSESGDSDESESKSEQR
TKRQPKPTYKKKQNDLQKKKGDAEEEVKPNGVLSRSAKEKSKLKLQSSSTGTGIPRSVLK
DWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRLIRSKKGEESTHSPVFCRFYYFRRL
SFSKNGVVRIDGFSSPDQYDDEALSLWTHENYEDDELDLETSKYILDMIGDKFCQLVTSE
KTAMSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKSS
RDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHNIREKFEIKSHCQCTAKQS
MQAGKLPAVNGVSQVLQNVLNHSNKISLCMPESQQQSSPPKSEANGNSSPRSDASTDSKL
TPPESQSPLHWLADLAEQKAREEKKENKECPSGKHSKEEKDQDNLESPNCKSSPPASQNN
EQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTPSGKSGRTMPNILDDIIASVVENK
IPPNRTPKMNVKSEIKDEPKEDRKCILDDSTKLYNDIQYSWICDKHVLWLRDHKNSNNWK
LFKECWKQGRPVLVSGMHKKMNFSLWKAESISLDFGNQQADILNCKDSIISNANVKEFWD
GFEDVSKRQKIKNGETALLKLKDWPSGEDFKAMMPARYEDLLKSLPLPEYCSPEGKLNLA
SHLPGFFVRPDLGPRLCSAYGVAATKDHDIGTTNLHVEVSDVVNILVYVGIAKGNGVLSK
SGVLKKFEEEDLDDLLRKRLKDSSELPGALWHIYAGKDADKIREFLQKIAKEQGLEVLPE
HDPIRDQSWYVNKKLRQRLFEEYGVKTCTVIQFLGDAIILPAGALHQVQNFHSCVHVTED
FVSPEHLVQSFHLTQELRLSKEEINYDDKLQVKNILYHAVKEMVRALKIHESEMEDMEES
NT seq
7563 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagacgcggccggagctggtggggaagcggttcctgtgcgtcggcggcggc
gaggagccgccggagagcgggcgctggcgggccggggtcatccgcgccgtgtcgcagcgg
gactcgcacagcgccgagctcgcggtatacgtggaatttgatgaccttgaatgggaaaaa
cgagaatgggttaaagtttatgaagattttgcaacgttcttggtggagtaccagctggtc
tgggcgaaacgaaaggacccaagccagactcagggatcaaagagcaaacaaattcaatgg
cctgcattgacattcaagcccttggttggaaaaagtgtgtacaatgcagttactgcagta
gaattccttgtggacaagcagctggattttataactgaagatagtgcctttcagccctat
caggacgacgtagacagtctaaacccagttctcagggataacccgcagttacatgaggag
gtaaaagcctgggtaaaggagcaaaaggttcaggagatttttatgcaaggtccgtactcc
ttaaatggttatagggtgagagtatacagacaggattctgccacccagtggtttactggt
ataattactcatcatgatctcttcactcgcactatggttgttatgaatgaccaggtgtta
gaacctcaaaatgttgatccttctatggttcagatgacctttctagatgatgtcgttcac
tctttgttgaaaggtgaaaatattggcatcacttcacgccgaaggtctcgttccaaccag
aacagcaacacagttcatggtcattttacacgtgcgcaagcaaatagtcccaggccagca
atgaatccccaaagtgcagcacccaaacagccttcccagcagcagcagcagcagcagccg
ccgcagccgcagcgcagtactcggccgaacaaaaggaaaggctccgacagcagcgcgcct
gacgaggagaagatgaaggaagagagatacgattacattgggcgaggagaacaccccaaa
gccaaaaataaacacttccttagtaaaagaagaaaacctgaagaggatgaaaagaaatta
aacatgaagagactgcggacggacaatatctcagattattctgagagcagcgactcggaa
atctcaaataaaagattaacagattcgtcctcagagcaaaattcggaaaatgagttaaaa
ggcaagaacacttcaaagataaatggagaggagggaaaatcccaaactattgaggaatta
caggagcagacactaccagataggcagtctccatggcgtgaaatacaggaggataaaaaa
cgtgaagagacagaaagactgaagtcatctgtcttagatcagcaggaacagtcttcactc
catgcagcagagcagccaacaccttatgagcagaatgccaaggatccacatgtgcaagag
tgcagcgcagaaaaacatcatactgtggaattaaaaaatgagcagtttgtacccagacct
cctactccaaaatgtggtgttgatataactaatgtaaacagctctgagaaggagagccag
gatactgctgcaagtacctttggtttgcagacggttcagaaaactgaatctcagagcagt
gatttaaaacagcagtttgcaaatgcaaatttccttgaaacaagaaaacaggaaactgat
caaagttgggtgagcaatgttgttaacaagacgagtttgatacaacctggggttgtgaaa
aacttaccagtaacagaacatttgaatcctgaaaaagagaaagtgccgcatggctcattt
ataccttcgttaaatgtagcttctttagcagaagaaagtaaactgcgtaagcaaagtcca
gtccctgattctgtgaagtcaaaacctagtgcttcagttgatcatcctaaaacaaagtca
cctgatgttaagcctaaattcacccaatcttctgatactgtgaagtctaaggttagttcc
caaaacagccatgccacaggattaacaaggtcagccaataaaagcgagcatgatttgcca
aggtctagtttccatccagttccagctagagttagtgctctagaaactactaaaagtcct
cttatcattgacaagaacgaacatttcacggtgtacagggaccccactctgattggacaa
gaagcaggagctaatcacatttcaccttatttgcatcagcataattatccgctgcattcc
tcatcccaccgaacctgtttaaatccgagcgctcatcatcctgcattatctggttcatcc
catctgttatctgggtcttccactcagactccgctgtccgctattaacactcatcctctt
agtaccgcatctcacccttctgttcatcacccccatctacttcctgcagtgttacccgga
gtgcctgccgcctccttgctgggtggccacccgcgcctagagactgctcacgctagcagc
ctaagccatttggcattggcacaccagcagcagcagcagatgttacaacaccagtctcca
catcttcttggacaagctcatccttctgcttcctataatcagctagggctttatccaatt
atttggcagtacccaaatggaacacatgcttactcaggactcggtctgccctcctcgaaa
tgggtccaccctgaaactcctgttaacgcagaggcttccttgagaaggaacacsccgagc
ccgtggctgcaccagcccgcaccggtgacctcggccgatggcctcgggttactgagtcac
attcctgtgagaccgtccagcgcagatccgctgcggcctctcaagctgacgacgcactcg
agcccgcccctgcccaagagcatggccgagcatcacaaggaagaactggagaggaaggcg
ttcattgaacctttacgctctgttacaaccgcgcccataaagacggagctggagccgagc
agggcgcaggcggccaaggagagccacatgcacagacatttcacagatcccttgctgagc
cagctgcccagggctccaccggagaccggtgagcggctgagcaagtacaaggaagaacac
aggcgaatactccaggaaagcatcgaggttgctccttttaccgctaaaatgaaggcactg
gagggggagagagagaactattccagggtaacgtccttatcttcaagtcccaaaagccat
tcagtaaaatatgacaaagatgcagagcgttctgtatcagaactgtacaaaatgaagcac
tcggttcckccgagtttgccacagagtaactatttcaccaccctgtctaatagtgtcgta
aacgaaccaccaagatcctacccgtccaaggaagcttctaacgcctatgttgataagcag
actaattgtccctcgactgcagcgagtccccaggctctcccttcgtacatctcctctctt
tccaaacctccccctttaataaagcaccaaccggagggcgaaggctctgcaagcaaggca
gctgagcagctttcgcagtcagtgcagtctcactcggtggcttcttttaggagcgacagc
aggagcccaactcagctgtcagtgtcatcttcaaacacactccgcagtatgccagccttg
cacagagcccccgtgttccaccccccggttcaccagaacctggagaagaaggaaagcagc
tacagcagcctgtcccctcccactctaactcctgttcaacctgttaatgctggtggcagc
aaaatccaggaattacaaaagcctcccactttagtacctgaacccaaggaagctcagaca
gtttacaagggtgtttctgagcaaaatttgtcagaaatgtggaaggctaacaacgcccca
aacagtgaaaaagtggactggcacgccgaaagaacgagtggaaagtcgcagtcggcgaca
gcgtctgttattgtgcgtcccccttcccgcacgaaacacgagagcgcagcagtgatgcag
ccaccggccaaagagcgagctagcgagcgagcttcagctgtgacaaatcaaacagattgc
ccgaaaacagcggaagccagagagacggggagagtcattctgccaaatatgaactcagac
ggcgctcgcacacactatgagaagaagtttccagctgtctcgcaaggcagccttgctagc
gctgtcgcccccgccacggccatgacctgcagcaccaaaacggacgtaacggcctcggcg
gccaccactacgagcgtgtcgagctggggcgcttcccaagtgacctgctcgtcatcgagc
gcggctggggcctgcgcgccgcccgagggcgcgagagccaggactgccacggccgcgccg
ggcagcgccaagggcgccggcgccgcgcagcccttctgcccctccgycgacttcgtccac
ttgaagaagcacaaggcggcgctggccgcggcgcagttcaggagtagcaacgccagcgag
gccgaggccagtgctgccaaaagccagacaacttcagcctcgctctccggggacgctgct
atcgtctgtaatacaataaacaaagcaaactctgtaggcagcgggcagactgcccagacg
agtcagccaaactaccacactaaactgaaaaaggcttggctaacaagacattcagaggaa
gataaaaacactaataaaaaagagaattcagggaacagtgtttcagaaattattaagcca
tgtactgtcaatttaatagcttctacatcaaatgatttgcaaaataacatagatagtaaa
atcctggcagagaagtttgtgaaagaagataagcaccctaggagaaaagcaaaaagaact
taygagtctggctctgaaagcggagactccgatgaaagcgagagcaagtcagagcaaagg
actaaacggcagcccaagccgacttacaaaaagaaacaaaacgatttgcagaaaaaaaag
ggcgatgcagaggaagaagtaaaaccgaatggtgttcttagcaggagcgccaaggaaaaa
agcaagctgaagttacagagcagcagtactggcactggcatacctcgctcagtattaaaa
gaytggcgcaaagtaaagaagctgaagcaaacaggagagtcctttttgcaggatgattct
tgctctgaaataggaccgaatttgcaaaaatgcagagaatgtaggttaataagaagtaag
aaaggtgaagaatcgactcactcaccagtattttgtagattttactactttcgacggttg
tcattcagtaagaacggagtggttaggatagatggtttctcctctcctgatcaatatgat
gatgaagcactgagtttatggacacatgaaaactatgaagatgatgaactggacctagaa
acttctaagtacattttagatatgataggcgataagttctgtcagttagtaacatctgag
aaaacagccatgtcctgggtgaagaaagacgccaaaatcgcatggaagagagcagtgaga
ggagtccgtgaratgtgtgatgcatgcgaagccacattatttaacattcactgggtctgc
caaaaatgtggattcgtggtctgcctggattgttataaggcaaaggaaaggaaaagctcg
agagacaaggagctctatgcctggatgaagtgtgtgaaggggcagcctcatgatcacaaa
cacttgatgccaactcagattattcctggctctgttttgacagatcttctagatgcaatg
cataatattagagaaaaatttgaaattaaatcccattgtcagtgtaccgccaaacagagc
atgcaagctggcaagctccctgcagtgaatggcgtatctcaggtcttacagaatgtcctc
aatcacagtaataaaatctccctgtgtatgcctgagtctcagcagcagagctccccacca
aagtccgaggccaacggcaactccagcccgaggagcgacgcgagcacggacagcaagctc
accccgccggagtcgcagtcgccgctgcactggttagctgatctggctgagcagaaagcc
agagaagaaaagaaagagaataaagagtgtccttctggaaaacattcaaaggaagaaaaa
gatcaggataatttagagtccccaaactgtaaatcctcccctcctgcgtcccagaacaat
gagcagggctcaaccttacgagatttactaactacaacagcaggcaaactacgcctcggt
tctacagatgcgggtattgcttttgctccagtttactccacaggaacacccagtgggaaa
agcggaaggaccatgccaaacattcttgatgacataattgcttcagtggtagaaaacaag
attccaccaaacaggacaccaaagatgaatgtaaaatctgaaataaaagatgagccaaag
gaggatagaaagtgtattctagatgacagcactaaattgtacaatgatattcagtattct
tggatctgtgataagcacgtgctgtggctcagagaccataaaaacagcaacaactggaag
ctcttcaaagagtgctggaaacaagggaggcctgtattagtgtccggcatgcataagaaa
atgaacttcagcttgtggaaagcagagtcaattagtctggattttggaaaccagcaagct
gatatcttgaattgcaaagacagcattatttcaaacgccaatgtcaaggagttctgggat
ggttttgaagatgtttcaaaacggcagaaaataaaaaatggggaaacagctctactaaaa
ttgaaagattggccttctggtgaagatttcaaggctatgatgccagcaagatatgaagac
ttattaaaaagcttacctttgcccgagtattgcagtccagaaggaaaattaaacttggcc
tctcatctgccaggattttttgtccgtccggatttgggacccagactttgcagtgcctac
ggtgtggctgctactaaagatcatgatataggaactacaaatctccatgttgaagtttcc
gatgtagtgaacatccttgtttacgttggcatagcaaaaggaaacggagtcctttccaaa
tcaggagtattgaagaagtttgaagaagaagatttggatgatcttttaaggaagagattg
aaagattcaagtgaattacctggtgctttgtggcacatttatgctggcaaagatgctgac
aagataagggagtttctgcaaaagatagcaaaggaacaaggcctagaagttctaccagag
catgatccaatacgtgatcagagttggtatgtgaacaaaaaactccgccaaagactcttt
gaagaatatggagtaaaaacctgtacggttattcagtttcttggtgatgcgattattcta
ccagcaggagcacttcatcaggtgcagaattttcacagctgtgttcacgtaaccgaagac
tttgtgtctcccgaacacctcgtacagtcattccacctgacgcaggaactgaggctgtcg
aaggaggagatcaattacgatgataaactgcaggttaaaaatatcttgtatcacgcggtt
aaagaaatggtgagagctttgaagattcatgaaagtgaaatggaggacatggaagaaagc
taa
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integrated database retrieval system
