Nothoprocta perdicaria (Chilean tinamou): 112950682
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Entry
112950682 CDS
T07556
Symbol
PCDH9
Name
(RefSeq) protocadherin-9
KO
K16498
protocadherin delta 1
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
112950682 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
npd01009
]
112950682 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
npd04515
]
112950682 (PCDH9)
Protein phosphatases and associated proteins [BR:
npd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112950682 (PCDH9)
Cell adhesion molecules [BR:
npd04515
]
Cadherins
Protocadherins
112950682 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Big_9
MAP17
V_ATPase_I
EphA2_TM
RCR
DUF6249
Cadherin_4
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
112950682
NCBI-ProteinID:
XP_025899067
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDREKLCAGAAYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVALSILNDNENFVLDPFSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQVNEHFYWS
ISTAYKCPVNQY
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttaccttttggctgctctgattgcctgtttaaggctggattct
gctatagctcaagaacttatttacactattagagaggagctgcctgaaaatgtacccata
ggaaacataccaaaggatctgaacatttctcatatcaatgctgccacggggaccagtgcc
agccttgtctacagacttgtttctaaagcaggggatgcccctctggtcaaagtgtccagt
accaccggggagatcttcacgacgtctaacagaatagacagagaaaaactctgtgctgga
gctgcttacgctgaagaaaatgagtgtttctttgaactcgaagtggtgattctccccaat
gacttttttaggctgatcaaaataaaaattattgtaaaggatactaatgacaacgcaccc
atgtttccatcgcctgtcatcaatatctccataccagaaaacactctgatcaacagccgc
tttccaatcccatcagccacagatcctgacacaggtttcaatggcgtgcagcattatgag
ctgttaaatggacagagtgtctttggactggatatcgtagagactccagaaggcgagaaa
tggcctcaactgattgtgcagcagaacttggatagagagcaaaaggacacctatgtgatg
aaaatcaaagtggaggatggaggtaccccccagaaatccagcactgccatcctgcaagtc
acagtaagtgatgtcaatgataataggccagtttttaaagagagtcaagtagaggttcat
ataccagagaatgcccctgtaggcacttctgtaattcagcttcatgctacagatgcagac
ataggaagcaatgcagaaatcagatatatttttggtgcccaagttgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacagttcagaggtccttagatcgg
gaagagactgctattcacaaggtgacagtgctggctagtgatggtagctccactccggct
cgggcaacggttaccatcaatgtcactgatgtaaacgataatcctcctaacatagacctc
aggtacataataagtcccatcaatggcacagtgtacttatctgagaaagatcctatcaat
acaaagattgctctaattacagtttcagataaggacactgatgtgaatggcaaagtaatc
tgtttcattgagagagaggtcccctttcacttgaaggcagtttacgacaaccagtatttg
ttagagacttcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtc
gcctctgattctggcaagcccagtttgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccgccgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctccttttttgatctggatcgaaag
acgggagttttgacagcctccagagtttttgacagagaagaacaagagcggttcattttc
accgttacagccagggacaacggcacccctcctctgcagagtcaagcagctgtgattgtt
actgtcttggatgaaaatgacaacagtcccaagtttactcataatcacttccaatttttt
gtgtcggagaacttgccaaagtatagcaccgtgggcgtcataacggtgactgatgcagat
gctggggaaaataaagcggtggctctttccatcctcaatgacaatgaaaactttgtgctg
gatcctttctctggagttataaagtccaacgtttcttttgaccgagaacagcagagctcc
tacacctttgatgtcaaggccgtggatggaggacaaccacctcgctcttctacagcgaaa
gtcacaataaatgtcatggatgttaatgataacagtcctgttgtcatctacccaccctcc
aatacttcttttaagctagtgccactttcagcaattccaggatcggttgtagcagaagtg
tttgctgtggatatagacactggaatgaatgccgaactgaagtatacgattgtaagtgga
aataacaaaggtttgtttcgtattgaccctgtgacaggtaatatcactctggaagagaaa
ccaactcctaatgatgtagggctgcatcgtttagtggtcaacataagtgatctgggttat
cccaaatccttgcatacccttgtgctggtatttttgtatgtaaatgatactgctggaaat
gcctcttacatttacgacttgatacgcaggactatggaaacacctctggaccggaacatc
ggggacagtagccagccctaccaaaatgaggactatctgacgatcatgattgctattgtg
gcaggtgctatggttgtcatagtagtgatatttgtcacagttcttgtccgctgtcgccat
gcatccaggttcaaagcagcccagaggagcaagcagggtgctgagtggatgtctcccaat
caggagaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctccaaagagttcc
cttttgaactttgtgaccattgaggagtccaaacctgatgatgcagttcatgaacctatc
aacgggacaataagccttccagcggagctggaggagcaaagtataggaagatttgactgg
ggcacagcaccgccaacaacctttaagcctaacagtcctgatcttgccaagcattacaag
tctgcctctccacagtctgcttttcatctcaaacctgacactccagtttcagtaaaaaag
caccatgtgattcaggaactcccgttggacaacacctttgttggtggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagctcccaagga
ggcttcaagacaaagggccccttacacaccagacaggtaaacgagcacttttactggtct
ataagtactgcatacaagtgccccgtcaaccagtattaa
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integrated database retrieval system
