Nothoprocta perdicaria (Chilean tinamou): 112950748
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Entry
112950748 CDS
T07556
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03082
ATP-dependent chromatin remodeling
npd03083
Polycomb repressive complex
npd04110
Cell cycle
npd04330
Notch signaling pathway
npd04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112950748 (HDAC1)
03083 Polycomb repressive complex
112950748 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112950748 (HDAC1)
04350 TGF-beta signaling pathway
112950748 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112950748 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npd03036
]
112950748 (HDAC1)
Enzymes [BR:
npd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
112950748 (HDAC1)
Chromosome and associated proteins [BR:
npd03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
112950748 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
112950748 (HDAC1)
BRAF-HDAC complex
112950748 (HDAC1)
REST complex
112950748 (HDAC1)
SHIP complex
112950748 (HDAC1)
MiDAC complex
112950748 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
112950748 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
112950748 (HDAC1)
Chromatin remodeling factors
NuRD complex
112950748 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
112950748
NCBI-ProteinID:
XP_025899166
Ensembl:
ENSNPEG00000005449
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSK
QMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG
FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGD
RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP
YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIPEDAV
QEDSGDEEEEDPEKRISIRNSDKRISCDEEFSDSEDEGEGGRKNVANFKKAKRVKTEEEK
EEEEKKGDEKEEEKAKEEKAEPKGVKEETKSA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccccacaggatccgcatgacccacaacctcctactgaactatggcctctacagg
aagatggaaatatatcgtcctcacaaggctaatgcagaagaaatgaccaagtaccacagt
gatgactacataaaatttctgagatctattcgcccagataacatgtctgagtacagcaag
cagatgcaaagattcaatgttggggaagactgccctgtgtttgatgggttgtttgaattt
tgtcagctctctgctggaggctcagttgccagtgctgtgaagctgaacaagcaacagacg
gatattgctgtgaattgggcaggaggccttcaccatgcgaagaagtcggaggcttctggc
ttctgctatgtcaacgacattgtcttggctatcttggagctcctcaagtatcatcagaga
gtgctgtatattgacattgatattcaccatggagatggcgtggaggaagccttttatacc
acagaccgtgtcatgaccgtgtcctttcacaagtacggcgaatacttcccaggaacgggg
gacctgagggatatcggtgcaggcaaaggcaagtactacgctgtcaactatcccctccgg
gatggaatcgacgatgagtcgtatgaggcaatattcaagccagtgatatctaaagtgatg
gagacgttccagcctagtgcagttgtcttgcagtgcggatcagattccctgtcaggagac
aggctgggatgttttaacctgaccatcaagggtcatgccaagtgtgtggagtttgtaaaa
agttttaatttgccgatgctgatgctgggaggaggcggctatacaatccgcaacgtggcc
agatgctggacctacgagactgctgtggccttggacactgaaattccaaacgaacttccg
tataatgactatttcgagtacttcgggccggacttcaaactccacatcagtccctcaaac
atgaccaaccagaatacaaatgagtaccttgaaaagatcaagcaacgtctctttgagaat
ttgcgcatgctgcctcatgcccctggcgtccagatgcagccaattcctgaggatgctgtt
caggaagacagtggagatgaagaggaagaagatcctgagaaacgcatttcaatccgcaat
tctgataagagaatatcctgtgacgaagaattctctgactctgaagatgaaggggaagga
ggccgcaaaaatgttgccaacttcaagaaagctaaacgtgtgaaaactgaagaggaaaag
gaggaagaggagaagaaaggagatgagaaagaagaggaaaaagcaaaagaagagaaagca
gaacccaaaggagtgaaggaagagactaaatctgcctga
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