Nothoprocta perdicaria (Chilean tinamou): 112951220
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Entry
112951220 CDS
T07556
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112951220 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npd03041
]
112951220 (PRPF38B)
Spliceosome [BR:
npd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
112951220 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
112951220 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
112951220
NCBI-ProteinID:
XP_025899658
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MANNSPAVGAGNCQGQQAAQHQAGCVLPAQQQLQSGGPKPAASGKQGNVLPLWGNEKTMN
LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR
GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDW
FESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKTIDQQIKSRP
RKIKKDGKEGMEEIDRHVERRRSRSPRRSISPRRSPRRSRSRSRHRESHGSSSFDRELER
ERERQRLEREAKEREKERRRSRSTDRALERRRSRSRERHRSRSRSRDRKADRRDRDRERE
KENERSRKKDRDYDRERGSEREKDSDRSRERSKERRSKGDAEERRHKDDKDDKKHRDDKR
DSKKERKHSRSRSRERKHRSRSRSKNTGKHSRSRSKEKSTKHKSESKEKSNKRSRSRSRG
RADSDEKSRKRDHSPSKERSRKRSRSKERSHKQEPGDSKDHSDKQDRRRSQSTEQESQEK
QQKNKDETV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaacagccccgccgtgggcgccggtaactgccaggggcagcaggcggcccag
caccaggcgggctgcgtgctgccggcccagcagcagctgcagagcggagggcccaagccg
gcggcctcgggcaagcagggcaacgtgttgccgctctggggcaacgagaagaccatgaac
ctcaaccccatgatcctcaccaacatcctctcctcgccctacttcaaggtgcagctctac
gagctcaagacgtaccacgaggtggtggacgaaatctacttcaaggttacacatgttgaa
ccatgggaaaaggggagtagaaaaacggcaggccagacagggatgtgcggaggggtacgt
ggtgttggaactggaggaattgtatcaactgccttttgtctgctctacaaactatttaca
ctgaaacttacccgtaagcaagtgatgggccttataactcatacagattctccatacatt
agggctcttggatttatgtatattaggtacactcagccgcctacagatctgtgggactgg
tttgaatcctttcttgatgatgaagaggacctggatgtgaaggcaggtgggggttgtgtc
atgaccattggagagatgcttcgttccttcctcactaagctggaatggttttcaacgttg
tttccaagaattcctgtgccagtccagaaaactattgaccagcaaattaaaagcagacct
agaaaaatcaagaaagatggcaaagagggaatggaagaaatagatcgtcatgtagaacgt
agacgttcaaggtctccaagacggtctatcagccccagaaggtctcccagaagatccaga
agccgaagtcgtcatcgggaaagccatggatcatctagttttgatagagaactagaaaga
gaaagagagcggcaaaggctagaacgtgaagctaaggagagggaaaaagaaaggcggcga
tcccggagtacggatcgggcgctggaaaggagacgaagcaggagcagggaaagacacaga
agccgcagtcgaagtcgagacaggaaagcagatcggagagacagggatagggagcgagag
aaagaaaatgaacgaagcaggaaaaaagatagagattatgacagggaaagaggtagtgag
agggaaaaagatagtgatcgatctagagagaggtcgaaagagaggagaagtaagggtgat
gcagaagagaggagacacaaagatgacaaggatgataagaaacaccgtgatgacaagagg
gattccaaaaaagagagaaaacatagtagaagtcgaagcagggaaagaaagcataggagt
aggagccgaagtaagaatacaggtaagcacagccggagcaggagcaaagagaaatcgact
aaacataaaagtgaaagcaaagagaaatcaaataaacgaagtaggagcagaagccgagga
agagcagatagtgatgagaagtctaggaaacgagatcacagtcccagcaaagagagatct
agaaagcgtagtagaagcaaagaacgttctcacaaacaggagcccggtgatagcaaggac
cattcagacaaacaggatcgtcgaaggagccaaagtacagaacaagagagccaagaaaag
caacaaaaaaacaaagatgaaactgtgtga
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