KEGG   Nothoprocta perdicaria (Chilean tinamou): 112951309
Entry
112951309         CDS       T07556                                 
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
npd  Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:npd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112951309 (CDC40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:npd03041]
    112951309 (CDC40)
Spliceosome [BR:npd03041]
 Complex C
  Other components
   Step II factors
    112951309 (CDC40)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WDR55 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_TEP1_C ANAPC4_WD40 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_Vps41 PQQ_2
Other DBs
NCBI-GeneID: 112951309
NCBI-ProteinID: XP_025899749
Ensembl: ENSNPEG00000006594
LinkDB
Position
Unknown
AA seq 518 aa
MEEDVETGVHLDPAIKEVQYNPTYDTMFAPEFGPENPFKTQQMAAPRNMLSGYAEPAHIN
DFMFEQQRRTFVTYGYALDPSIDNPEVATKYIGSVEEAEKNQGLTVFETGQRKIEKRKKF
KENDASNIDGFLGPWAKYVDEKEVAKPSEEEQKELDEITAKRQKRGKLEDDKPGEEKTIL
HVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSG
HIMLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDISFNNAGTRFLSAAYDRYLKLWDT
ETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAV
NTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM
DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKTTK
LYSRVKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq 1557 nt   +upstreamnt  +downstreamnt
atggaggaagatgtggagacaggagtccaccttgatcctgctatcaaggaagttcagtac
aatcccacttatgataccatgtttgctcctgagtttggaccagaaaacccatttaagact
cagcaaatggctgcacctagaaatatgctttccggatatgcagagccagctcacatmaat
gatttcatgtttgaacaacaaagaagaacattcgtaacctatggctatgcattagatccc
tctatcgataaccctgaagttgctaccaaatatattggctctgtcgaagaggctgaaaaa
aatcaaggtttaacagtgtttgagacaggacagaggaaaatagaaaaaaggaagaaattc
aaagagaatgatgcgtctaacattgatggcttcttgggaccatgggcaaaatacgttgat
gaaaaagaagtggcaaaaccctcagaagaagaacagaaagagttggatgaaataacagct
aagaggcagaagagaggaaagctagaggatgataaacctggggaggagaagactatatta
cacgtcaaggaaatgtatgactatcaggggagatcttatcttcatgtccctcaagacgtc
ggagttaatctccgttctaccgtgccaccggagaaatgctatcttccgaagaaacaaatc
cacgtgtggtctggacatacaaagggtgtcagtgcagttagattgtttcctctctctggg
cacataatgctgtcttgctctatggactgcaaaattaagctatgggaggtatatggcgat
cgaaggtgtctacgaacattcattgggcacagtaaagccgttcgagacatctcctttaat
aacgctggcacgcggtttctcagcgcagcctacgaccgctacctgaagctctgggacacc
gaaacagggcagtgtatttcaagattcaccaayaggaaggttccctactgtgtcaaattc
aatcccgatgaagataaacagaatctctttgttgcaggaatgtcagataagaagattgtg
cagtgggatattcggagtggtgagattgtgcaggaatacgacaggcatttgggagctgtc
aacaccattgtgttcgtggatgaaaatagacggtttgtgagcacatccgatgacaagagt
ttaagagtctgggaatgggatattcccgtggacttcaagtacatagctgagccgagcatg
cactcgatgccagccgtgactttgtctcccaacgggaagtggctggcttgtcagtcgatg
gacaaccaaattctgattttcggcgctcagaacagattcagattaaacaagaagaagatc
ttcaagggccacatggtagctggctacgcctgccaagtggatttttcacctgacatgagc
tatgtgatatccggagatgcggacggaaaactgaacatctgggactggaagaccaccaag
ctctacagcagggtgaaggcccacgataaagtctgcattggtgccgtgtggcacccgcac
gaaacgtccaaagtcatcacgtgtggctgggatggcctgattaaactgtgggactga

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