Nothoprocta perdicaria (Chilean tinamou): 112951430
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Entry
112951430 CDS
T07556
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npd03021
]
112951430 (CHD1)
03036 Chromosome and associated proteins [BR:
npd03036
]
112951430 (CHD1)
Transcription machinery [BR:
npd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
112951430 (CHD1)
Chromosome and associated proteins [BR:
npd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
112951430 (CHD1)
SLIK complex
112951430 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
Motif
Other DBs
NCBI-GeneID:
112951430
NCBI-ProteinID:
XP_025899901
Ensembl:
ENSNPEG00000014306
LinkDB
All DBs
Position
Unknown
AA seq
1808 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDTSREKKQVQAKPPKVDGSEFWKSSPSILAVQRSAVLKKQQQQQQKAASSDSGS
EEDSSSSEDSADDSSSETKKKKHKDEDWQMSGSGSVSGTGSDSESEEDGEKSSCEESESD
YEPKNKVKSRKPPSRIKPKSGKKSAVQKKRQLDSSDDDDDDEDDDDDDYDKRGSRRQATV
NVSYKEAEETKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRFGRKGATGAATTIYAVE
ADGDPNGGFEKSKEPGEVQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQE
TKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPY
SECSWEDGALIAKKFQARIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHES
LELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVP
LSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLK
DKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLH
FIMPEKFSSWEDFEEEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEM
SALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQE
ALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSI
KGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARA
HRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSST
PFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQ
FKVANFSNMDEDDIELEPERNSRNWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRNCAK
QISFNGSEGRRSRNRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSY
KKFGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSGPERAGGRLGKVKG
PTFRISGVQVNAKLVISHEEELAPLHKSIPADPEERKRYVVPCHTKAAHFDIDWGKEDDS
NLLIGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLAR
KEAQRLAGARRKARTKKNKVLKAVKVKEEIKSDSSPPPSEKSDDDDDEDNKDEIVSVKHP
HKKIKAEKENEEKPEPDIGIKKETEEKRETKEKENKRDLKREKKEKEDKKELKEKDIKEK
RENKVKESTQKEKEVKEEKVNETKSENKEKTKKVPLSDTPVHITASSEPVPISEESEELD
QKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQ
IKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNISSNVNTHVIRNPDVE
RLKENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDAYKKSDSRKRPYSAFSNGKDHRDW
DHYKQDGRYYSDSKHRKLDDHRSRDHRSNLEGCLKDSRPHSDHRSHSDHRIHSDHRSSSD
YSHHKSSRDYRYHSDWQMDHRASGSGPRSPLDQRSPYGSRSPLGHRSPFEHSSDHKSTPE
HSWSSRKT
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagaaagcgtaagaaacagtagtggagagtcaagtcaatcg
gatgatgattctgggtcagcatcgggttctggatctggttcaagctctggaagcagcagt
gatggaagcagcagccagtcaggtagcagcgactctgactctggatccgagtcaggcagt
cagtcagaatctgaatctgacacttcgagagagaagaaacaagttcaagctaagccacca
aaagttgatggatctgagttttggaagtccagtccaagcatacttgccgtgcagagatca
gcagtgctcaagaagcagcagcaacagcaacaaaaggcagcttcatcagacagtggttca
gaagaggactcatctagtagcgaagattctgcagatgactcatccagtgagaccaagaag
aaaaagcataaagatgaagactggcaaatgtctggatcaggatcagtatcaggaactggc
tccgattctgaatcggaggaagatggagagaagagcagttgtgaagagagcgaatctgac
tacgagccaaaaaacaaagtcaaaagccggaagcctccgagcaggattaagccaaaaagt
ggcaaaaaaagtgcagtacagaaaaagaggcagcttgattcatcagatgacgatgatgac
gatgaggacgacgacgatgatgattatgataagagagggtctcgtcgccaggcaacagtc
aatgttagttacaaagaagctgaagagactaagacagattctgatgatctgctggaagtc
tgtggagaagatgtcccacagcctgaggaagatgaatttgaaactatagagaagtttatg
gatagtcgatttggtcgaaaaggagccactggtgctgcaaccaccatctatgcagttgag
gcagatggtgatccaaatggtgggtttgaaaaatcgaaggagccaggtgaagtacaatat
ctgattaaatggaaaggctggtcccacatccataatacctgggagactgaggaaacactg
aagcaacaaaatgttaagggaatgaagaagctggacaattataagaaaaaagatcaggaa
acaaaacgatggctgaaaaatgcttctccagaagatgtggaatattataactgccagcag
gaacttacagatgatctacataaacaatatcaaatagtggaaagaataattgctcattca
aatcagaaatcagcagctggttatccagattactattgcaaatggcagggtctgccttac
tcagaatgcagctgggaagatggtgctctcattgctaaaaaattccaggcacgcattgat
gagtattttagcagaaatcaatccaagaccactccctttaaggactgcaaggttctgaaa
cagaggccgaggtttgttgcactaaagaagcaaccatcttatattggagggcacgagagt
ttagaattaagagattatcagttaaatggactgaactggcttgctcactcatggtgcaaa
gggaatagttgtattcttgcagatgagatgggtctaggtaaaacaatacaaacaatttct
tttctgaactacttgtttcacgaacatcaactatatggacctttcttgctcgttgtgccc
ctttctaccttgacatcttggcaaagagagattcagacttgggctccccagatgaatgct
gtggtttatttaggagatataactagcagaaatatgataagaactcatgaatggatgcat
ccacagaccaagcgattaaagtttaatatacttctaacaacttacgaaattttgctgaag
gataagtcgttccttggtggtctgaattgggcatttataggagttgatgaagctcatcgt
ctgaaaaatgatgattcccttctgtacaagacactaatagactttaagtctaaccatcgt
cttcttattactggaactcctctgcaaaactccctcaaagagctttggtccttgctgcac
ttcatcatgccggaaaagttttcttcttgggaagactttgaagaggaacatggaaaaggg
agagagtttggttatgcaagtctccacaaagaacttgaaccatttctactgagaagagtt
aaaaaagatgtggaaaagtctttacctgctaaggttgagcaaattttgaggatggaaatg
agtgcattgcagaagcaatactacaagtggattttaacccggaattataaagccctgagt
aaaggttctaaaggcagtacatcaggcttcttgaacatcatgatggaactcaagaagtgt
tgtaaccattgctacctcattaaaccaccagatgataatgaattctataataaacaggag
gccttacagcatttaatacgtagcagcgggaaactaatccttcttgacaagctactgatt
cgtctgcgagaacgtggcaacagagttctgattttctctcagatggtgaggatgctggac
atcctagcagagtatttgaagtatcgccagtttccctttcaaagacttgatggatcaata
aaaggagagttgaggaaacaagcactggatcattttaatgcagaaggatcagaggacttc
tgctttttactgtctaccagagctggagggttaggtataaacttggcatctgctgacacc
gtagttatatttgattctgactggaatccgcagaacgatctgcaggcgcaggcaagagcc
cataggattgggcagaagaaacaggttaacatttatcggctagtcacaaagggatcagtg
gaagaggatattcttgaaagagccaagaagaagatggtgttggatcacttagtaattcag
agaatggacactacagggaaaactgtgctacatacaggctctactccttcaagttcaaca
ccctttaataaggaagagttatcagcgattttgaaatttggtgctgaggaactttttaaa
gaacctgaaggggaagaacaggagccccaggaaatggatatagatgaaatcttgaagagg
gctgaaacacgggaaaatgagcctggcccattaactgtaggagatgagctgctttcacag
ttcaaggtggccaatttttccaatatggatgaagatgacatagaattagaaccagagcga
aattcaagaaattgggaagaaatcattccagaagtccagcggcgaagaatagaagaggag
gaaagacaaaaggaacttgaagaaatatatatgctcccaaggatgagaaattgtgcaaaa
cagatcagctttaatggcagcgaaggaaggcgcagtaggaaccgaagatattctggatct
gatagtgactccatctcggaaagaaaacgtcccaaaaaacgtggaaggccacgaactatt
cctcgagagaatattaaaggatttagtgatgcagagattagacggtttatcaagagttac
aagaaattcggtggcccccttgaaaggttagatgctatagctagagatgctgagctggtt
gataaatctgagactgaccttaggcgcctgggagagcttgttcataatggatgcatcaag
gctttgaaggacaactctggaccagaaagagcaggaggtagacttgggaaagttaaaggc
ccaacattccgaatatcaggagtgcaagtaaacgcaaagctggtcatctctcacgaagaa
gagctggcgccactgcataaatccatccctgcagatccagaagaaaggaagaggtatgtc
gtcccgtgccacaccaaggcagctcattttgatatagattggggtaaggaagatgattcc
aatctgttaataggcatctatgagtatggctatggcagctgggaaatgataaaaatggat
cctgatctcagcttgacacagaagattttgcctgatgatccagataagaaaccccaggcc
aagcagttacagacccgtgcagactacctcattaaattgctgaataaagaccttgcaaga
aaggaagcacaaagacttgctggtgcgaggaggaaagcacgaactaagaagaataaggtg
ctaaaggctgtgaaagtaaaagaagaaataaaaagtgactcctctccaccaccttcagaa
aaatctgatgatgatgatgacgaggataataaggatgagattgtttcagtgaaacatcca
cataaaaaaataaaagcagaaaaagaaaatgaagaaaagcctgagccagatattggtata
aagaaggaaactgaagaaaaaagagagacaaaagagaaggaaaataagagggatttgaaa
agggagaaaaaagaaaaagaggataagaaagaattaaaagaaaaagatattaaagaaaag
agagaaaacaaagtaaaagaatccacacagaaagaaaaagaagtaaaggaagagaaggta
aacgaaaccaaatctgaaaacaaagaaaaaactaaaaaagttccattgtcagatactcca
gttcatattacagcaagtagtgagccagttcctatatctgaggaatctgaagagcttgat
cagaagacattcagtgtgtgcaaagaaagaatgaggcctgtcaaagcagcactgaagcag
ctggatagaccagagaaaggcctttctgagagggaacagctggaacacactaggcagtgc
ctaatcaaaattggggatcacattactgaatgcctcaaggagtacacaaatcctgaacaa
attaaacaatggagaaaaaatttgtggatatttgtctctaagtttacggaatttgatgcc
agaaagctgcacaaactgtataaacatgcaatcaaaaaacgccaagagtctcagcaacac
aatgaccagaatattagcagcaatgtgaatacacacgtgattagaaatccagatgtggaa
agactgaaagagaatacaaatcatgacgacagtagcagggacagttattcttctgataga
catctgtcacaatatcatgatcatcacaaagacaggcatcagggagatgcctataagaaa
agtgactctaggaaaaggccctactcggctttcagcaacgggaaagatcacagagactgg
gatcactacaaacaagacggcagatactacagtgatagtaaacacagaaagttggatgat
cacaggagcagagatcacaggtcaaacctggaagggtgtttgaaagacagtcggcctcat
tcagaccaccgttcccattcagaccacaggatccattctgatcaccgttccagctccgac
tacagtcatcataaatcttccagagattataggtaccactcagactggcaaatggaccac
agagcttctggtagtggcccaaggtcaccattagatcagaggtctccttatggttcaaga
tctcccttaggacacagatctccatttgaacactcatcagatcacaaaagtacccctgaa
cattcatggagcagccggaaaacataa
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integrated database retrieval system
