Nothoprocta perdicaria (Chilean tinamou): 112951521
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Entry
112951521 CDS
T07556
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112951521 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npd03019
]
112951521 (SMG7)
Messenger RNA biogenesis [BR:
npd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
112951521 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
112951521 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
112951521
NCBI-ProteinID:
XP_025900012
Ensembl:
ENSNPEG00000015269
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MGLKSEIPLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQMHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
KTRWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVI
NLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLSLFMSFLGVLCKCPLQNDYQEDSGAAYP
LPAVKVSMDWLKLRPSVFQEAVVDERRYIWPWLISLLNSFQPHEEDLSSSNATPLPEEFE
LQGFLALRPSFRNLDFSKGHQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEV
GKLLFLTEIPELILEDPSEAKESLALQETSIAEPLSTDGSPGLKSVLSTGRSLNNNCDAG
EKPMVTFKENIKPREVNREQGRIYPPKDVSRERRDYSKGIVATKIDGKKDNNKRKNETKK
CPLDKMQEAGKQNVAVQVKSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPP
LPSRPGFPPPTYVVPPPVAFSMSTGYTFPGGVSVPGTFLQPTAHSPAGNQVQAGKQSHIP
YSQQRPSGPGPMTQGPQQTPPPTQQPLSSLPAQATAQSAGQLQVQALAQQQQQSPTKAVQ
GLGKSPPHHSGFQQYPQTDSSKQLWNPPQVQGSLGKIMPVKQSYYLQAQDPLKLFEQSLQ
PPVMQQQPLEKKMKPFPMEPYNQNPSEVKVPEYYWDSSYGMADNRVMAQQSSMDRRGKRQ
GVFRPEQDAVSRMTFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASL
PGRSLFKSLLEKPSELMSQSSSFLSLSGFSLNQERYPNSSMFNEVYGKNMNTSTKTEVPS
VAHQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNF
GPIGTSDNRDRRIADRWKTDKPAMGGFGLDYLPATSSSSESSWHQSSTPSGTWPAQGPPL
EDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGAMNPPH
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgggactcaaatcagagatacccttgaggcaggcagaagtcctgaaggctgacatgaca
gattcaaagctgggtccagcagaagtctggacatccagacaggctctacaggacttatat
cagaaaatgctcgtgactgatttggaatatgctttagataaaaaggtggagcaggacctt
tggaatcatgcttttaaaaatcagatcactacgctacagggtcaagcaaaaaatagagca
aatccgaatcggagcgaagttcaggcgaacctttctctgttcctagaggcagctagtggc
ttctacacccagttattacaggaattgtgcacagtttttaatgtagacttgccctgtcgt
gtgaagtcttcccagctgggaatcattagcaataaacagatgcacaccagcgctattgtg
aagccgcagtccagctcctgctcttacatctgccagcactgccttgtccaccttggagat
atcgctcgctataggaatcagaccagccaggcagagtcttactacagacatgcagctcag
cttgtcccttccaatggtcagccttataatcagttggctattctagcttcctcaaaagga
gaccacttgaccacgattttctactactgcagaagcattgctgtgaagtttcctttccca
gctgcctccactaacttacaaaaagcactttctaaagcactggagagtcgtgatgaagtg
aagactcgatggagtgtgtccgacttcatcaaggcgtttattaaattccatggtcatgtg
tacctgagtaagagcttggagaagctgtcccctcttcgagaaaagctggaagagcagttc
aagaggttgttattccaaaaggccttcaattctcagcagttagtccatattactgttatc
aacctgttccaactccatcacctgcgagactttagcaatgagacagagcaacacagctac
agccaggatgagcagctctgctggacacagttactgtctctcttcatgtcgtttcttgga
gttctctgcaagtgtcctttacagaatgactaccaggaggactctggggctgcttatcct
cttccagctgtgaaggtgtcaatggactggctgaaactcagacccagtgttttccaggag
gcagtagttgatgaaagacggtacatatggccctggctgatttctcttctgaacagtttc
cagccccatgaagaagatctatccagtagtaatgcaacccctcttccagaagaatttgag
ttgcaaggattcctggccctgagaccctcgttcaggaacttggatttttcaaaaggccac
caggctattacaggggataaggaagggcagcaacgtaggatacggcaacagcgtctgatc
ttcacaggcaaatggattgctgataaccaaccaaggttaattcagtgtgaaaatgaggtg
ggaaagctgttgtttttgacagaaatcccggagttaatactagaggatcctagtgaagcc
aaagagagtcttgccttgcaggagacatcaattgcagagccactatccacagatggaagc
cctggactcaaatcagttctgtccactggcagaagtctaaacaacaaytgtgatgcagga
gaaaaaccaatggtcacattcaaagagaacattaagccacgggaagtaaacagagagcaa
gggcgaatctatcctcctaaagatgtcagtagggagagaagggactatagcaaaggaata
gtagccaccaaaattgatggaaagaaggataacaataaaagaaagaatgagaccaagaaa
tgccccttggataaaatgcaggaagcgggaaagcagaacgtggcagttcaggtaaagtcc
cagactgagatgaggaaaactccagtgtctgaagccaggaaaacgcctgtaactcagact
ccaagtcaggccagcagttcccagttcatccccattcatcacccaggagctttccctccc
ctgcccagccgaccaggattcccacctccaacctacgttgtccccccacccgtggctttc
tccatgagcacgggatacaccttcccaggcggcgtttctgtcccaggaaccttcctgcag
cccaccgctcactcgcctgcgggcaaccaggtgcaagccgggaagcagtcccacattccc
tacagccagcagcggccctccggaccagggcccatgacccagggacctcagcaaacacct
cctcccacccaacaacccctctcatcgttaccagctcaggcgacagcacagtctgcaggc
cagctacaggtgcaagcgctggcccaacagcagcaacagtcccccacaaaggctgtgcag
ggccttgggaagagccccccgcaccactcggggttccagcagtacccccagacagactcg
tcaaagcagctctggaaccctcctcaagtccaaggctcgctggggaagatcatgcctgta
aagcagtcctattaccttcaggcccaggaccctctaaaattgtttgaacagtcattacag
cctcctgtgatgcaacagcagcctctggagaaaaaaatgaagccttttccaatggagcca
tataaccagaacccctcagaagtcaaggtgccggaatattactgggactcttcttatggc
atggctgataacagggtgatggcgcagcagtcgagcatggaccgcagggggaaacggcaa
ggagtcttccgcccagaacaggatgctgtctccaggatgacctttgaggaccccaagagc
tcccctctgcttcctccggacctgttaaagagtctggctgccttggaggaggaggaagag
ctgattttctctaatcctcctgatctttacccagctctgctggggcctctcgcctctctt
cctggacgaagcctctttaagtccttgctggaaaaaccatcagaactgatgtcccagtca
tcttctttcctgtccctcagtggcttttcccttaaccaggaaagatacccaaatagcagc
atgttcaatgaagtttatgggaaaaacatgaataccagcacaaaaacagaagttccttca
gttgcccatcaggagacttcactctattctctcttcgaagggactccatggtctccatcc
cttccagccagctcagatcattcaacaccagccagccagtctcctcactcctccaacccc
agcagcttgccaagctcccctccaacccataaccacaattctgttcccttctccaacttc
gggcccattgggacttcagacaaccgagacaggagaatygcagaccgctggaaaacagat
aaaccagcaatgggaggatttggtctggactatcttccagcaacatcctcgtcttcagag
agcagctggcaccagtccagcactcccagtggcacctggccagcccagggtccccctctg
gaggactcctcagctgtgctcatggagagcctgaagtccatctggtccagctccatgatg
catcctggcccttcagccctggagcagctgttaatgcagcagaagcagaagcagcaacgt
ggacaaggcgccatgaacccgccgcattga
DBGET
integrated database retrieval system
