Nothoprocta perdicaria (Chilean tinamou): 112951636
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Entry
112951636 CDS
T07556
Symbol
ARID1B
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112951636 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npd03000
]
112951636 (ARID1B)
03021 Transcription machinery [BR:
npd03021
]
112951636 (ARID1B)
03036 Chromosome and associated proteins [BR:
npd03036
]
112951636 (ARID1B)
Transcription factors [BR:
npd03000
]
Eukaryotic type
Helix-turn-helix
ARID
112951636 (ARID1B)
Transcription machinery [BR:
npd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112951636 (ARID1B)
Chromosome and associated proteins [BR:
npd03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112951636 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
112951636
NCBI-ProteinID:
XP_025900143
Ensembl:
ENSNPEG00000015605
LinkDB
All DBs
Position
Unknown
AA seq
2297 aa
AA seq
DB search
MAHNAAPAAAAGSSTSAGGGSSSELAPKEGGSSSALSSSSSSAAAAVSSSSSSSSSSNPG
SAMETGLLPNHKLKGVGGDHPAAPPHHHHAHHPHHHAHHHHHAHHPHHHHHALQQQLNQF
QPPPPQQPPPQHHPMQNNNSSLGGGGGSNNNGGGGGGAAQPSADMEQQQHGGKDSVLGAQ
AEPPQQPQQMLNKGADEEEMPGKMGEPIGGRYEHPGLGALGGQQQPQQPPQSAGSGGGGL
GSSGGGGGGPSAAAVAEFNSYYGNAAPAAAGSAAASRAGPCFDQHGGQQSPGMGIMHPAA
APNSMDPLQNSHEGYPNSQYNHYPAYSRGPGGGGGAGGGXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGKAAAGAAAAAGGFQRFSGQNQHPSG
ATPTLNQLLTSPSPMMRSYASSYPDYSSPGAPPPQPQAAAAAPGGQQAAAGMGMGKDMGS
QYGAANPAWAAAQQRNHPAMSPGSTAQTIGRSQGSPMDPMVMKRPQLYGMGNNPHSQTQQ
SSPYPGQSYGPPGPQRYPVGMQGRAPAAMAGMQYPQQQIPPQYGQQGVSGYCQQGQQPYY
NQQPQHLPPQAQYLSQAQQRYQAQQDMSQEGYGTRSQPPMAPGKPNHEDLNLIQQERPSS
LPVEVLASEDATFGHKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGEQSNPAQSPFSPH
ASPHLSGIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQ
SPMPQDRGFMAGIQRNPQMSQYGPQQSGPSMSPHPSPGGQVHPGIGSFQQSNSSGTYGPQ
MSQYGPQGNYSRPPTYSGVPNTSYSGPGPGLGINANSQLHGQGPSQPCATMPLGRMPSAG
MQSRPFPGNMSSMTPNSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGN
FPAMNQSGIMGSSSPYTQPMNNSSGLMNPQAPPYSMAPNMVNSSAAPMGLADMMTPGESK
LPLPLKADGKDEGAAQPESKAKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDES
DSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGSEPERKMWVDRYLTFMEERGTPVASL
PAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATTLNVGTSSSAASSLKKQYIQYLF
AFECKIERGEEPPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQSTGSNSMTEVPGDL
KPPTPASTPHGQMTPMQGGRNSAVSVHDPFSDVSDSSFPKRNSMTPNAPYQQGINMPDMM
GRMPYEPNKDPFGGMRKVPGSNEPFMTPGQMPNSGIQDMYNQSPSGAMSNMSMSQRQQFP
YGSGYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGMYPQQQNYKRHMDGMYGPPAKRHEGD
MYNMQYGSQQQDMYNQYGNAYSGPDRRPMQGQYPYPYNRERMQGPGQMQQHGIPPQMMGG
PMQSSSSSEGPQQNMWPGRNDMPYPYPNRQGPGGPAQAPPYPGMNRSDEMMVPDQRINHE
SQWPSHVNQRQPSYMSSSASMQPITRPPQSSYQTPPSMPNHISRAPSPASFQRSLENRMS
PSKSPFLPSMKMQKXIPTVPVSQVTGPPPQPPPIRREITFPPGSVEASQPVLKPRRKITS
KDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFR
KCLIDIFGILMEYEVGDPGHKALDHKAAKKDDSQSLAEDTGKEENDECIDYFDEDEEEGE
DEKVEGEEKSIVFSTPGAIADPSERPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEF
DSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRKAPPPLNSPSKKKDLEGKGESEEQQEKS
ITATIDDVLSARPGALPEDSNPGSQTESSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLC
TITHWQDSLAKRCICVSNIVRSLSFVPGNDTEMSKHPGLVLILGKLILLHHEHPERKRAP
QTYEKEEEEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGL
LHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKLY
ATLVRYVGDRKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNLISFLEDGVTMAQY
QQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLN
SLVASVICDVLFQIGQL
NT seq
6894 nt
NT seq
+upstream
nt +downstream
nt
atggcccataacgcggcgcccgccgctgccgccggcagcagcaccagcgccggcggcggc
tcctcctcggagctggctccgaaggaaggtggaagctcctccgcgttgtcttcctcgtcc
tcctctgctgctgctgctgtttcttcctcctcctcctcctcctcctcctccaacccgggc
tcggccatggagacggggctgctccccaaccacaaactgaaaggcgtcggaggcgatcac
cccgccgcgccgccccaccaccaccatgcccaccacccgcatcaccatgcccaccaccac
caccatgcccaccacccgcaccaccaccaccatgcactacagcagcagctaaatcaattc
cagccgccgccgccgcagcagccgccgcctcagcaccatcccatgcagaataacaacagc
agcctcggcggcggcggcggcagcaacaacaacggcggtggcggtggcggcgctgctcag
cccagtgcagacatggagcagcagcaacatggaggaaaagacagtgttttgggcgctcag
gccgagcccccgcagcagccgcagcaaatgctgaataaaggcgccgacgaggaggagatg
cccggcaaaatgggcgagcccatcggcggccgctacgagcaccccggcttgggagccctg
ggcggacagcagcagccccagcagccgccccagagcgccgggagcggcggcggcggcctc
ggcagcagcgggggaggcggcggcggcccctccgccgccgcagtcgcggagttcaacagc
tattatggcaacgctgcccccgccgccgccggcagcgccgcggcgagccgcgccgggcct
tgctttgatcaacatggcggacaacaaagccccgggatggggataatgcaccccgcggcg
gcccccaacagcatggaccccctgcaaaactcccacgaagggtaccccaacagccagtac
aaccactacccggcctacagccggggccccggcggcggcggcggcgcgggcggcggcnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctcggcaaggcggctgccggc
gcggcggcggcggccggcggcttccagcgattttcggggcagaaccagcacccgtccggg
gccacccctaccctcaaccagctgctcacgtcccccagccccatgatgcggagctacgcc
agcagctaccccgactacagcagccccggcgccccgccgccgcagccccaggcagcggcg
gccgcgccgggaggccagcaggcagcggcgggcatgggcatgggcaaggacatgggctcg
cagtacggagcggccaacccggcctgggcagcggcgcaacaaaggaaccacccggccatg
agccccggcagcaccgcgcagaccatcggcaggagccagggcagcccgatggatccgatg
gtcatgaagagacctcagctgtacggcatgggcaacaaccctcactcacagacgcagcag
agcagcccctaccccgggcagtcgtacggccctcccggcccgcagcgctatcccgtggga
atgcagggccgggctccggcagccatggcaggaatgcagtatccacagcaacagatcccg
ccccagtacggccagcagggcgtgagcggctactgccagcagggccagcagccctactac
aaccagcagccccagcacctgccgccgcaggcgcagtatctgtcgcaggcccagcagagg
taccaggcgcagcaggacatgtctcaggaaggctatggaaccagatctcaaccccctatg
gccccaggaaagcctaaccacgaagacttgaatctgatccagcaagaaagaccatcgagc
ttaccagttgaagtcttggcctcggaggatgctacatttggacacaaggatttgtctggc
tccattgatgacctgccgactggaactgaagcaacgctgagttcggccgtgagcgcatcc
gggtccacaagcagccaaggggagcagagcaaccctgcacagtcgccgttctcgcctcat
gcctctccgcatctctccggcattcctggagggccgtcgccttctcccgtcggctcccct
gttggaagcaaccagtcgagatctggtcccatttctccagcaagtattccaggcagtcag
atgccaccgcagcctcctggcagccagtcagaatccagctcccaccctgctttgagccag
tcaccaatgccacaggatcgaggcttcatggcaggcatacagaggaacccccaaatgtcc
cagtatggacctcagcaaagtggaccgtccatgtcaccacatccttcacctggaggccaa
gtccaccctggaatcggtagttttcagcagagtaattcaagtggtacttatgggcctcag
atgagccagtatggaccacaaggaaactactcccgaccaccgacatacagcggcgtgccc
aacacgagctacagcggcccgggccccggcctgggcatcaacgccaacagccagctgcac
ggccaggggcccagccagccgtgcgctaccatgcccctgggacggatgccgtcagccggc
atgcagagcaggcccttccctgggaacatgagcagcatgacccccaactctccaggcatg
tctcagcagggaggccctggcatgggcccccccatgccgactgtgaaccgtaaggctcag
gaggcggctgctgccgtgatgcaggctgctgcaaactccgctcagagcaggcaaggcaat
tttcctgccatgaaccagagcggcatcatgggctccagctcgccctacacgcagccgatg
aacaacagctctggcctcatgaacccgcaggcccctccgtacagcatggccccgaacatg
gtgaacagttcagcagcacctatgggtcttgcagatatgatgacacccggtgagtccaaa
ctcccgcttcctctcaaagcggacggcaaggacgaaggcgccgcgcagcccgagagcaag
gccaaggatagctacagctctcagggtatttctcagcccccaaccccaggcaacctgcca
gtcccttccccaatgtccccaagctctgctagcatctcctcatttcatggagatgaaagt
gatagcattagcagcccaggctggccaaagactccatcaagccctaaatcgagttcctct
accacaactggagagaagatcacgaaagtctacgaactgggaagtgagccggagcgcaag
atgtgggtcgaccggtacctcaccttcatggaggagcggggcacgcctgtggccagcctg
ccggccgtgggcaagaagcccctggacctcttcaggctctacgtctgtgtcaaggagatc
ggaggcttagcacaggttaacaagaacaagaagtggcgtgagctggcgaccaccctgaac
gtgggcacctcgagcagtgcagccagctccctgaaaaaacagtacatccagtacctgttc
gccttcgagtgcaagatcgagcgcggggaggagcccccgccagaagtcttcagcaccgga
gatactaagaaacaacctaagatccagccgccatctcctgctaattccggttccttacaa
ggcccacagactccacagtctactggcagtaattccatgacagaagtgccaggcgatttg
aagcctcccacaccagcatcaacacctcatggacaaatgacacctatgcagggtggcagg
aacagcgccgtgagcgtgcacgatcccttttcggatgtgagcgattcctcgttcccgaag
cgcaactccatgacgcccaacgcaccataccagcagggaataaacatgccagacatgatg
ggaaggatgccctatgagccgaataaagatccatttggcggaatgagaaaagtgcctgga
agcaacgagcctttcatgacccctggacaaatgcccaatagtggaatacaagatatgtac
aaccagagtccatccggagcaatgtccaacatgagcatgagccagcgccagcagttccct
tayggaagtggctatgacaggaggcatgaaccatatgggcagcagtatccaggacaagga
cctccctcaggacaacccccatatggaggacatcaacctggaatgtatccacagcagcag
aactacaagcgacacatggacggcatgtacgggccgccggcgaagcgccacgagggcgac
atgtacaacatgcagtacggcagccagcagcaggacatgtacaaccagtacggcaacgcg
tacagcgggccygacaggaggcccatgcagggacagtacccctatccctacaaccgggag
cggatgcagggcccagggcagatgcagcagcacggaatccccccgcagatgatggggggc
cccatgcagtcgtcgtcctccagcgagggcccccagcagaacatgtggcccggccgcaac
gacatgccttatccttacccgaacaggcaagggcccggcggccccgcgcaggcgccgccc
tacccagggatgaaccgctccgatgagatgatggtacctgaccagaggataaaccacgag
agtcagtggccttctcacgtcaaccagcgtcagccttcgtatatgtcctcctcagcctcc
atgcagcctatcactagacctcctcagtcatcctaccagacgccaccctctatgccaaac
cacatttcgagggctccaagcccggcatccttccagcgctctctggaaaaccgtatgtct
ccaagcaagtctcctttcctcccctccatgaagatgcaaaagrtgatacccacggtccca
gtgtcccaggtgacagggcctccaccccagccacctccaattaggcgagaaatcaccttc
cccccaggctctgtagaagcatcgcaaccagtcttaaaaccaagacgaaagattacctca
aaagatattgtaactcctgaggcctggagagtgatgatgtctctcaaatctggccttttg
gccgaaagtacctgggcgctagacactattaatattcttctgtatgacgacagcactgtt
gctactttcaacctctctcagttgtctggatttcttgagcttttggtagagtattttaga
aaatgcctgattgacatttttggaatccttatggaatatgaagtgggagatccaggtcac
aaagcacttgatcacaaagcagccaagaaagatgatagccagtccttggcagaggatact
gggaaagaggagaacgatgaatgtattgactattttgatgaagatgaggaggagggggag
gatgaaaaggtagaaggagaagagaagagcattgttttttccactcccggtgccattgct
gatccaagtgagaggccaaaacaagccagtaaatttgacaagctgccaataaagattgta
aagaaaaataatctgtttgttgttgaccgatctgacaaacttggacgtgttcaggaattt
gatagtggactcctccactggcagcttggtggtggtgacacgaccgagcacatccagact
cactttgaaagcaagatggagatccctccacgcaggaaagcccctcctcccttgaattct
ccaagcaaaaagaaggacctcgaggggaaaggcgaatctgaggaacaacaagagaagagt
ataacagctaccattgatgatgtcctctcagctcggccaggagcgttgcccgaagactcc
aaccccggttcccaaacggagagcagtaagtttccctttgggatccaccaagccaaaagc
caccggaatattaaactgctggaggacgagccaaggagccgggatgagactcctctatgc
accataacccactggcaagactccctggccaaacgctgcatctgtgtgtcaaatatcgtc
cgtagcttgtcctttgtgcctggcaatgacaccgaaatgtccaaacatccaggcttggtg
ctgatcctgggaaagctgatccttcttcaccacgagcatccggaaagaaagcgagcgcca
cagacatacgagaaggaggaagaggaggacaaaggtgtggcctgcagcaaggatgagtgg
tggtgggactgcctcgaggtcttgagggataacacattggtcacgttagccaacatttct
gggcagctagacttgtctgcttacacggaaagcatctgtttgccaattttggatggcttg
ctgcactggatggtgtgcccctcggcggaggcacaggatcccttcccgaccgtggggccc
aactcggttctttcgcctcagagactcgtgctggagaccctgtgtaagctcagcatccag
gacaataatgtggaccttatcttggccacgccgcccttcagtcgtcaggagaaactctac
gctacgttagttaggtacgtcggggaccgcaaaaacccggtctgccgagaaatgtccatg
gcgctcctatcgaaccttgcgcagggggacacgctggcggcgcgcgccatagccgtgcag
aagggcagcatcggcaacctgatcagcttcctggaggacggcgtcaccatggcccagtac
cagcagagccagcacaacctcatgcacatgcagccgccgcccctggagccacccagcgta
gacatgatgtgccgggcggccaaggccctgctggccatggcgcgggtggacgagaaccgc
tccgagttcctcttgcacgagggccgcttgctggatatctccatatctgctgtcctgaac
tctctggtcgcctctgtcatctgtgatgtactttttcagatcgggcagttatga
DBGET
integrated database retrieval system
