Nothoprocta perdicaria (Chilean tinamou): 112951643
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Entry
112951643 CDS
T07556
Symbol
SCAF8
Name
(RefSeq) protein SCAF8
KO
K13191
RNA-binding protein 16
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npd03021
]
112951643 (SCAF8)
03041 Spliceosome [BR:
npd03041
]
112951643 (SCAF8)
Transcription machinery [BR:
npd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112951643 (SCAF8)
Spliceosome [BR:
npd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112951643 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
112951643
NCBI-ProteinID:
XP_025900157
Ensembl:
ENSNPEG00000015599
LinkDB
All DBs
Position
Unknown
AA seq
1385 aa
AA seq
DB search
MGHIQDVGRLRLLAQISDLSFTCCAAGLGETQLIACSTKLYSLNDYKPPISKAKMTQITK
AAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNN
IISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLPSTT
AAMSNNTPGTPVTPVTPANVVQSLPDPWVSQIANTDTLAAVAQILQSPQGQQLQQLIQTL
QIQQQKPQPSLLQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQSVSFNKKLMDRFDFG
EESEQNEEPKKETPTSQLPLVPESVNNSLFHQLAEQLQQQNLEHLRQQLLEQQQPQKASP
EENPEGNFGSEHSASPSQGSSQQQFLEVETNVDDSIDTQQQDMDIDEGQDVAEEEIFEQE
EKKSTVRSRSRTRSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSER
RAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIP
PRGCAYVCMVHRQDAYRALQKLSSGSYKIGSKIIKIAWALNKGVKTEYKQFWDVDLGVSY
IPWEKVKLDDLDGFAEGGMIDQETVNTEWETARSSEAAKENVPTTQSTAVDKSTVITTQT
EAYTQPVTMLQIPVAPAVPAVSLVPPAFPVTMSVPPPGYSPIPPPPFLRASFNPSQPPPG
FMPPPVPPVPPPVVPPPVVPPVVPTPLVQPPLPIAQEAMKDVPFTSLVLPVGTVSSNLAT
PTLSTGSIFNPLPSNKPEPDEKGSHLADLQISSSENSRAVQNDVSSSSGLGGVQPPSVSS
SSGLTGEGQPPSVSSSSGLSGAVQPPNVSSSSGHVGGGVQPPTVSSSPGLAGGVQLPSVS
SSSSLAGGVQPPSVSSSSGLMAGVPPPNVSSSSGLLPGVHPPSVSSSPGLLTGMQPPVVS
SSSGLLAGVQPPSVSSSSGLLMMPPPNVSSSSGLMGVPPPSISNSSGLLAMQHPVGVQNM
PHLNITNQRMPGMPILDIRPGLMPHSPGPRFPLMQPGIPPQRGIPPPAILDPALHPPPRG
PFPPGDIFNQTERPFGTPGRQNIDSIANSEKRLPLGGDNIQQEGDRDYRFPPVENRDNLS
RPSPVDVRDSVGRPPVDPREGIGRPPVDGREHFTRPHVDMRENFGRPALENLGRREHFGF
NSEKHWGQRGDYDEREHHAFPIYGGPKGFHEERERFRHINYRFDSRSGPSWNRGFEQDAH
RDFDDRRRPWERQRDRDDRDFNFCREINGNRFGRDRMSNNWIPPPHPRVFEYFDGATSQR
KADNLPQVNGENTETESQPPAAQVPDDPELYEKLTSSSEINKEKSDTAADIESEPVVEST
ETEGT
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatatacaagatgtgggccgcctgagactgctggcccaaatctctgacctttcc
tttacttgctgtgctgcaggtcttggagaaacacagcttatagcctgctctactaagttg
tactcgctgaatgattacaagccacctatctccaaagctaaaatgacacagataaccaag
gcagcaatcaaggctataaagttctataaacatgttgtacagagcgttgagaaattcatt
cagaagtgcaaaccagaatacaaggtgcctggtctctatgtcattgactccattgtgaga
cagtctcgacatcagtttgggcaagaaaaagatgtgtttgctccaagattcagcaataac
atcatcagcactttccagaatttgtaccgttgtcctggggatgacaagagtaaaattgtc
agagtgctaaatttatggcagaagaataatgtgttcaagagtgaaattattcagcctctc
ttggatatggcagcaggaattcctcctcccgttgtgaccccagtcttgcccagcactaca
gctgctatgagcaacaatacaccaggaacacccgtgactccagttactccagccaatgtg
gtgcagagtttacctgatccttgggtatctcaaattgcgaacacagatacacttgctgct
gtagcacaaattttacaaagtccccaaggccaacagcttcagcagttaatacagacactg
cagattcagcagcagaaacctcagccttcgctccttcaagccctggatgctggtcttgtt
gttcagttacaggccctgactgcacaacttacagctgcagctgctgctgccaacacactt
aatccactggagcagagtgtctcttttaataagaagctgatggacaggtttgactttggg
gaagaatctgaacaaaatgaagagcctaaaaaggaaactccaacttcccaactaccttta
gtaccagaatctgtgaacaactcactttttcatcaactagctgaacaactacagcaacaa
aacttagagcatctcagacaacagcttctggagcaacagcagcctcagaaggcaagccct
gaggaaaatcctgaaggaaattttggctcggagcactctgcatcaccttcacaagggagt
agtcagcagcagtttttagaagttgaaacaaatgtagatgattcaatagatactcaacaa
caggacatggatatagatgaaggacaagatgtggctgaagaggagatttttgaacaagag
gaaaagaaatcaactgttcgttcaagatcaagaacacgctcaagatctcgctcaagatcg
ccaagaaaacgaaggtctagatcaagatctggttctcgtaagcgtaagcacagaaaacgt
tcacgctcaagatcaagagaaaggaagagaaagtcatctcggtcgtactccagtgaaaga
agggctagggagagggaaaaggaacgtcagaaaaagggattgcctcctatacggtccaaa
acactaagtgtttgcagtactaccctttgggtaggtcaagtagacaagaaggctacacag
caggatttaaccaatttatttgaagaatttggacaaatagaatctattaatatgattcct
ccaaggggttgtgcttatgtctgcatggttcacagacaagatgcatatcgtgctcttcag
aagcttagttctggatcctataaaattggctctaaaattattaagattgcctgggcttta
aataaaggtgtgaaaacagagtacaagcagttctgggatgtggatctgggagtttcttat
atcccttgggagaaagtaaaattggatgatttggatggctttgctgaaggtggtatgata
gaccaggagacagtcaatactgaatgggaaacagccagaagctcagaagctgctaaagaa
aatgttccaactacccagagcactgcagtggacaagagcacagttattacaacgcagaca
gaagcttacacacaaccagtcacgatgctgcagattccagtagctccagctgtgcctgcc
gttagcttagttccacctgcgtttcctgtcacaatgtctgtccctcctcctggttatagc
cccattcctcctccacccttcttgcgagcaagtttcaacccttcacaaccacctccaggt
tttatgcctccaccagttccacctgtcccgcctcctgttgtccccccaccagttgtccca
cctgtggttccaacacctttagtacagcctccattaccaattgcacaagaggcaatgaaa
gatgttccttttactagccttgttctaccagttggcacagttagtagcaatctagccact
ccaacgttatctactggaagcatttttaatcctcttccaagcaacaaacccgaaccagat
gaaaaaggctcccatcttgcagacctccagatttcttccagtgaaaacagtagagctgtg
caaaacgatgtctcaagtagctctggacttggaggagtgcaaccacccagtgtttccagc
agttctggccttactggagaagggcagccacccagtgtctcaagcagctctggactttca
ggggcagtccagccaccaaacgtctcgagcagctctggacacgtgggaggaggagtgcag
ccaccaactgtttcgagcagcccgggtctcgccgggggagtgcagctccccagcgtctcc
agcagctcctctcttgcaggaggggttcagccacccagcgtctccagcagctccggactt
atggctggagtgccaccaccaaatgtctcgagcagctcaggtcttctccctggagtgcat
ccgcccagcgtgtcgagcagccccgggctgctgacgggaatgcagccccctgtggtctca
agcagttctggacttctggcgggagtgcagccgcccagcgtctccagtagctcggggctt
ctcatgatgcctccacccaacgtttcaagtagctctggacttatgggagtgccaccacca
agtatttcaaatagctctggacttctggcaatgcagcatccagtcggggttcaaaatatg
cctcacttaaatattaccaatcagaggatgccaggaatgcctattttagatatccgtcca
ggcctcatgccccattcacctggaccgaggtttccattaatgcagcccggaatcccaccg
cagcgcggtattcctcctccagcaatccttgatccagctcttcacccaccgcctcgaggt
ccttttcccccgggagatatttttaatcaaacagaaagaccttttggaacaccgggaaga
caaaacattgatagcattgctaattcagagaaaagactcccgctgggaggcgataatatt
cagcaggaaggagacagagattatcgctttcctccggtggaaaacagagataatctcagc
aggccatcccctgtggatgtcagagattctgttgggcgacctccagttgatcccagagaa
ggtataggaagacctccggtggatggaagagaacattttacaagaccacatgtagacatg
agagagaattttggccgaccagctctagaaaatcttggtcgaagggagcattttggtttc
aattcagagaagcactggggacagcgaggcgattacgatgaacgagagcaccatgccttc
cccatttatggtggccctaaaggcttccacgaggagagagagaggtttcggcacataaac
tataggtttgacagtaggagtgggcccagttggaatagaggatttgaacaagatgctcac
agagattttgatgaccgcagaagaccctgggaaagacagagggatagagacgacagagat
tttaatttttgcagagaaattaatggaaacaggtttggaagagacagaatgtcaaacaac
tggatccctcctccacatccgagggtttttgagtattttgacggggccacgtcgcagcgc
aaagctgataacctgccccaggtgaatggtgaaaacacggagacagaaagtcagccgcca
gccgcgcaggtgccggacgatccggaactctatgaaaaactgacatcgtccagcgagata
aacaaagagaagagtgacacagcagctgatatagaaagtgaaccagtggtagaaagcaca
gaaactgaggggacataa
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