Nothoprocta perdicaria (Chilean tinamou): 112952364
Help
Entry
112952364 CDS
T07556
Symbol
DHX36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112952364 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npd03019
]
112952364 (DHX36)
03012 Translation factors [BR:
npd03012
]
112952364 (DHX36)
Enzymes [BR:
npd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112952364 (DHX36)
Messenger RNA biogenesis [BR:
npd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112952364 (DHX36)
Translation factors [BR:
npd03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112952364 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
AAA_23
PhoH
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
112952364
NCBI-ProteinID:
XP_025900996
Ensembl:
ENSNPEG00000001019
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
RPSASGGGGRGGRGRHPSHLKGREIGLWYARKQGQKSKENDRQQRAVVRMDERREEQIVQ
LLSSVQARGEREQEAMSWWSGDEDGNAPEEPAKVRPAAERAPVKQRAVLEKTYLDRDAEY
LLEKNDQDAGLDEQLKEELRQKKSDPRYIEMQRFREKLPSYGMRKELVNLINNNRVTVIS
GETGCGKTTQVTQFILDDYIERGVGSTCRIVCTQPRRISAISVAERVAAERAEACGNGKS
TGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSVSHVVLDEIHERNLQSDVLMSI
IKDLLNIRLDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKLRYTP
ESTDRRPRWKKGFMQGHISRPEKEEKEEIYKERWPDYLRQLRGRYSASTIDALEMMDDDK
VDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMP
TVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAE
WVSQANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILKLG
GIAYFLSKLMDPPSHDAVMLAINHLMELNALDRQEELTPLGVHLARLPVEPHIGKMILFG
ALFCCLDPVLTIAASLGFKDPFVIPLGKEKVADARRKELSKNTKSDHLTVVNAFMGWEET
RRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQFAEHLLAAGFVNSRDPKDPKSNTNSDNEK
LLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEETEFHYNWLVYH
LKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQDTIAVDEWIVFQSPARIAHLVKNL
RQELDGLLQEKIENPHPVDWNDVKSRDTAVLTAIIDLITTQENESAKNYAPRFQNERYS
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
cggccctccgcgtccggcggcgggggccgcggcgggcgcggccgccaccccagccacctc
aagggccgcgagatcgggctgtggtacgcgcgcaagcagggccagaagagcaaggagaac
gaccggcagcagagagccgtggtgcgcatggacgagcgcagggaggagcagatcgtgcag
ctgctgagcagcgtgcaggccagaggcgagcgggagcaggaggccatgtcctggtggtct
ggggacgaggacggaaacgctcccgaggagcctgccaaagtgagaccagccgcggagaga
gcgcctgtgaagcagagagcagtgttggagaaaacataccttgatcgagatgctgagtac
ctcctcgagaaaaatgatcaagacgctggcttagatgagcagcttaaggaagagttaaga
cagaagaagtccgatccaagatatattgaaatgcagagattccgagagaaacttccttct
tatggaatgagaaaggagcttgtaaacctgataaacaataatcgggtaactgtgattagt
ggtgagacgggctgtggcaagactactcaagttactcagttcatcttggatgattacatt
gagcgaggggtcggctcgacatgcaggattgtgtgtactcagcccaggaggatcagcgcc
atctctgtggccgagagagttgctgctgaacgggcagaagcatgtggtaatggcaaaagt
acaggctaccagattcgtctacagagccggttgccaaggaaacaaggttccattttatac
tgtaccacaggaattgtcctacagtggctccaatcagataagcatctgtccagtgttagt
catgtagttcttgatgaaattcatgaaagaaatcttcaatcagatgttttaatgagcatt
attaaagatcttttgaatattcgtctggacctgaaagtaatacttatgagtgctacttta
aatgccgagaagttttcagagtattttggtaactgtccaatgattcacatacctgggttc
actttccctgtggtggagtatcttctggaagatgtgattgaaaagttgagatatactcca
gaaagcacagaccgtcgaccacggtggaagaaaggtttcatgcaaggacacataagcaga
ccagaaaaagaagaaaaggaggaaatctataaagaacgatggccagactatttaaggcag
ctacggggcaggtattcagcaagtactatagatgccttggaaatgatggatgatgacaag
gttgaccttgacctcatagcagcacttatcaggcatattgttctggaagaagaggatggt
gcaattctagtgtttctccctggctgggacaacattagcactttgcacgatctcttgatg
tcacaagtcatgtttaagtcagataggtttcttatcatacctttgcattcattgatgcca
actgttaaccagactcaggtttttaagaagaccccaccaggagtaaggaaaattgtgatt
gctaccaacattgcagagactagcattacaatagatgatgtggtgttcgttatagatggt
ggaaaaataaaggaaactcattttgatacacagaacaacattagcacaatggcagcagag
tgggttagtcaagctaatgccaagcagaggaaaggtcgagcaggaagagttcagccaggt
cattgctaccatctgtataatggcctacgtgctagccttctagatgactatcagttacct
gagatcttgaggacacctttggaggaactgtgtttgcaaatcaagattctaaagcttggt
ggaattgcttattttctgagcaagctaatggatccgccatctcatgatgctgtaatgttg
gccataaaccatctaatggagctgaatgctctggacagacaagaagagcttactccactc
ggtgtccatctagcacgattaccagttgaaccacatattggaaaaatgatcctgtttgga
gctttgttttgctgcctggatccagtacttaccattgcagctagcctcggcttcaaagac
ccttttgtcattcccctgggcaaagagaaagtagcagatgcaagaagaaaggaactgtca
aagaacactaaaagtgatcatctaactgtggtgaatgccttcatgggctgggaggagact
cgacgtcgcggtttcagaactgagaaagactattgctgggagtatttcctctctccgaat
acactccagatgctgcacaacatgaaaggacagtttgccgagcatctccttgcggctgga
tttgtgaatagcagagaccccaaagaccccaaatctaatacaaactcagataacgaaaag
ttactgaaagctgtcatctgtgctggcttatatcccaaagttgcaaagatccggccaagc
tttagcaaaaagagaaaaatggtgaaagtctgcaccaagacagatggaacagttaacatt
catccaaaatctgtgaatgtggaagagacagagttccattataactggctcgtgtatcac
ttgaagatgagaactagcagtatttacttatatgattgtacagaggtttctccatactgt
ctcttgttcttcggaggagatatatccattcagaaggataaagatcaggataccattgct
gtggatgaatggattgttttccagtctcctgcaagaatagcacacttagttaagaattta
agacaagagctcgatggtcttctacaggagaagatagaaaacccacaccctgtggactgg
aatgatgttaaatccagggacacagcagtgctgacagctattatagacttgatcacaaca
caggaaaatgaaagtgccaaaaactacgcccctcgattccagaatgaacgttacagttga
DBGET
integrated database retrieval system
