Nothoprocta perdicaria (Chilean tinamou): 112952632
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Entry
112952632 CDS
T07556
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npd03019
]
112952632 (TRIM71)
04121 Ubiquitin system [BR:
npd04121
]
112952632 (TRIM71)
Enzymes [BR:
npd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112952632 (TRIM71)
Messenger RNA biogenesis [BR:
npd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112952632 (TRIM71)
Ubiquitin system [BR:
npd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112952632 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
DUF5711
DUF4094
Motif
Other DBs
NCBI-GeneID:
112952632
NCBI-ProteinID:
XP_025901312
Ensembl:
ENSNPEG00000008882
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MASFPESDFQVCPLCKEMCGSPAPLSSNSSTSSSSSQTSGSSGGGGGGPPCGAPARRLHV
LPCLHAFCRQCLEAQRHPGDALKLRCPVCDQKVVISEPSGMDALPTSNFLLSNLLDVVVV
AAAADEQKNGRAAGSGPAAGSGAGGGGGGGGAAALLLRRPHSRQGEPRCSSCDEGNAASS
RCLDCQEHLCDNCVRAHQRVRLTKDHFIERFAAGAAAPLALSPPYPAAPYNILSVFPDRA
SYCQHHDDEVLHFYCDTCSVPICRECTMGRHVGHSFIYLQDALQDSRTLTIQLLADAQQG
RQAIQLSIEQAQAVAEQVEMKAKVVQSEVKAVTTRHKKALEERECELLWKVEKIRQVKAK
SLYLQVEKLRQNLNKLDNTISAVQQVLEEGRTMDILLARDRMLAQVQELKNVRGLLQPQE
DDRIMFTPPDQALYMAIKSMGFVSSGAFAPLTKATGEGLKRALQGKVASFTVMGYDHDGE
PRLSGGDMISAVVMGPDGNLFGADVSDQQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSP
FKVTVKSGRSYIGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFEP
CGTFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFILKFGEKGT
KNGQFNYPWDVAVNPEGKILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTF
NHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRN
HRVQIFESNGSFLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccccgagtcggacttccaggtgtgcccgctgtgcaaggagatgtgcggc
tcgccggcgccgctctcctccaactcctccacgtcgtcgtcctcctcgcagacgtccggc
tcgtccgggggcggcggcgggggcccgccgtgcggggccccggcgcggcgcctgcacgtc
ctgccctgcctgcacgccttctgccgccagtgcctggaggcgcagcggcacccgggcgac
gcgctcaagctgcgctgccccgtctgcgaccagaaggtggtgatctcggagccctcgggc
atggacgcgctgcccacctccaacttcctcctcagcaacctgctcgacgtcgtcgtcgtg
gcggccgccgccgacgagcagaagaacggccgcgccgcgggctccgggcccgccgccggc
tccggcgccgggggaggcggcggcggcggcggggcggcggcgctgctgctgcggcggccg
cacagccggcagggcgagccgcgctgcagctcgtgcgacgagggcaacgcggccagctcg
cgctgcctcgactgccaggagcacctgtgcgacaactgcgtgcgggcgcaccagcgcgtg
cgcctcaccaaggaccacttcatcgagcgcttcgccgcgggcgccgccgcgccgctcgcg
ctcagcccgccctaccccgccgcgccctacaacatcctctccgtcttccccgaccgcgcc
agctactgccagcaccacgacgacgaggtgttgcatttctactgtgatacctgttctgtc
cccatatgtcgggaatgtaccatgggacgacatgtgggtcacagctttatctacctccaa
gatgccctccaggattccaggactctcaccatccagctcctggcagatgctcagcaagga
cggcaggctattcaactgagcatcgaacaggcccaggcggtggcagagcaggttgagatg
aaagcgaaggtggtacagtccgaagtgaaagcagtgaccacgaggcacaagaaggccctg
gaggagcgggagtgcgagctgctctggaaggtggaaaagattcgccaagtgaaggcgaag
tcgctctacttgcaagtcgagaagttgcgccagaacctgaacaagctggacaacaccatc
agcgctgtgcagcaggtgctggaggagggccgcaccatggacattcttctggctcgggac
cgcatgctggctcaggtgcaggagctgaagaacgtgagaggcctcctgcagccccaggag
gacgacaggatcatgtttacaccgcctgaccaggccctgtacatggccattaaatccatg
ggctttgtcagcagcggggccttcgcccctctcaccaaagccaccggggagggcctcaag
cgtgcgctgcagggcaaggtggcctccttcacggtgatgggctacgaccacgacggcgag
cctcggctctccggcggcgacatgatctctgccgtggtgatgggcccggacgggaacctc
ttcggggcagacgtcagcgatcagcagaacgggacctacctggtcagctaccggccgcag
ctggagggggaacacctggtgtccgtgatgatgtgcaaccagcacatcgagaacagcccc
ttcaaggtcacggtgaaatccggccgcagctacatcggcatcgggctccccgggctctcg
ttcggcagcgagggagacagcgacgggaagctctgccgcccctggggcgtcagcgtcgac
aaggagggctacatcatcgtggcggaccgcagcaacaaccgcatccaggtgttcgagccc
tgcggcaccttccaccacaagttcggcacgctgggctcccggcccggccagttcgatcgt
cccgctggcgtggcctgcgacgcctcgcgtaggatcgtcgtggccgacaaggacaatcac
cgtatccagatcttcacgttcgagggccagttcattctgaaattcggggagaaaggaacc
aagaacgggcaattcaactacccgtgggatgtggccgtcaacccggagggcaaaatcctg
gtctccgacacaaggaatcaccgcgttcagctcttcgggcccgacggcgtgttcctcaac
aagtacggcttcgaaggggcgctctggaagcactttgattcccccagaggtgtgaccttc
aaccacgagggccacctggtcgtgacagacttcaacaaccaccgcctcctggtcatccac
ccggactgccagtccgcgcgcttcctgggctccgagggcaccggcaacgggcagttcctg
cgcccgcagggggtggccgtggaccaggagggccgcatcatcgtggccgattccaggaac
caccgggtgcagatattcgagtccaacggcagcttcctgtgcaagtttggcgcgcagggg
agcggctttggccagatggaccggccctcaggtatcgccgtcacccccgacggcatgatc
gtcgtcgtcgacttcggaaacaatcggatcctcgtcttctaa
DBGET
integrated database retrieval system
