Nothoprocta perdicaria (Chilean tinamou): 112952727
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Entry
112952727 CDS
T07556
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03040
Spliceosome
npd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112952727 (PRPF19)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112952727 (PRPF19)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npd03041
]
112952727 (PRPF19)
04121 Ubiquitin system [BR:
npd04121
]
112952727 (PRPF19)
03400 DNA repair and recombination proteins [BR:
npd03400
]
112952727 (PRPF19)
Enzymes [BR:
npd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112952727 (PRPF19)
Spliceosome [BR:
npd03041
]
Complex B
Other components
Prp19 complex
112952727 (PRPF19)
Complex C
Prp19-CDC5 complex
112952727 (PRPF19)
Ubiquitin system [BR:
npd04121
]
Ubiquitin ligases (E3)
U-box type E3
112952727 (PRPF19)
DNA repair and recombination proteins [BR:
npd03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
112952727 (PRPF19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_DCAF4
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_RIG_2nd
U-box
Beta-prop_SPT8
Beta-prop_Nup120_160
PROPPIN
Cytochrom_D1
Beta-prop_DCAF12
RMC1_N
Beta-prop_WDR35_TULP_N
DUF1830
zf-Nse
GP3
ATG16
Motif
Other DBs
NCBI-GeneID:
112952727
NCBI-ProteinID:
XP_025901414
Ensembl:
ENSNPEG00000013684
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MCTGSSADVLRIPADPDPGGSRRRSPPRSPFPRAVSNEVPEHPCVSPVSNHVYERRLIEK
YIAENGTDPVNNQPLSEEQLVDIKVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTL
RQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSAQPN
VAGAGESMDLGELAGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVAS
HVGLHSASIPGILALDLCPSDTNKILTGGADKNVIVFDKTSEQILATLKGHTKKVTSVVF
HPSQDLVFSASPDATIRIWSVPNASCVQVVRAHEGSVTGLSLHATGDYLLSSSDDQYWAF
SDIQTGRVLTKVTDESSGCALTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHS
GPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLAL
GGXDVQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtgcacgggaagcagcgcagacgtgctccggatcccggcggatccggatcccggcgga
tcccgccgccgcagccccccgcgctctcccttcccccgcgcagtctccaacgaggtgccc
gagcacccgtgcgtgtcgcccgtgtccaaccacgtgtacgagcggcggctgatcgagaag
tacatcgcggagaacggcaccgaccccgtgaacaaccagccgctctccgaggagcagctc
gtagacatcaaagtcgctcacccgatccggcccaagccgccgtccgctacgagcatccca
gccatcctgaaggccctgcaggacgagtgggatgccgtcatgctgcacagcttcaccctg
cgccagcagctgcagaccacgcgccaggagctgtcccacgcgctctaccagcacgacgcc
gcctgccgcgtcatcgctcgcctcaccaaggaggtcaccgcggccagagaagccctggcg
acgctgaaaccccaggctggcctcatcgtgccccaggcggtgccctcggcccagccaaac
gtggcgggtgctggggagtccatggatctgggagagctggcaggcatgacccccgagatc
attcagaagctgcaagacaaggccacggtgctgaccacggagcgcaagaagaggggcaag
actgttccggaggagctggtgaaaccagaggagctcagcaagtaccggcaggtggcttcg
catgtggggctgcacagtgccagtatcccggggatccttgccctggatctctgtccttcc
gacaccaacaagatcctcaccggcggggctgataaaaacgtcattgtctttgacaagact
tcggagcagatcctggccacgctcaaggggcacaccaagaaggttaccagtgtcgtgttc
cacccgtcccaggacttggtgttttcagcttctcctgatgcaaccatccggatctggtct
gtgcccaacgcctcgtgtgtccaagttgtccgtgcccacgagggctctgtgaccggcctg
agtctccatgccacgggggactacctcctcagctcttctgatgaccagtactgggctttc
tcggatatccagacaggccgtgttctcaccaaggtgacggatgagagctctggctgtgct
cttacctgtgcccagttccacccagatgggctcatttttggaacagggacgatggactcg
cagatcaagatctgggatctgaaggaacgtaccaacgtggccaacttccccgggcactcg
ggccccatcaccagcatcgctttctctgagaacggctactatctcgccacggccgcggac
gactcctccgtcaagctctgggacttgcgtaaactcaagaacttcaagacgctgcagctg
gacaataactttgaggtgaagtctctcatctttgaccagagtggcacctacctggccctg
ggtggcayggatgttcagatctacatctgcaagcagtggacagaaatcctccacttcaca
gagcacagcggcctcaccacgggggtggccttcggccaccacgccaagttcatcgcctca
acgggcatggaccggagcctgaagttctacagcctctaa
DBGET
integrated database retrieval system
