Nothoprocta perdicaria (Chilean tinamou): 112953157
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Entry
112953157 CDS
T07556
Symbol
COL15A1
Name
(RefSeq) collagen alpha-1(XV) chain
KO
K08135
collagen type XV alpha
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
npd00535
]
112953157 (COL15A1)
Proteoglycans [BR:
npd00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
112953157 (COL15A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
3keto-disac_hyd
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
112953157
NCBI-ProteinID:
XP_025901943
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
MLSWHAWWTWDLLLLLLGLSSHAGSAAQIIEERGSKGHLDLTELIGVPLPPSVYFITGYG
GFPAYNFGPDANIGRLTSAIVPLPFYRDFAIVVTVKPNSDRGGVLFAITDAFQKTIYLGM
RLSPVDDNTQRIIMYYTEPGSHISREAASFKVPVMTNRWNRFTVTVQRNEIALFMDCEEY
QRIQFQRSNRALMFESGSGIFVGNAGATGLEKFTGSIQHLTIKSDPRATEDQCEDDDPYA
SGDMSGNGSVQEQEGIPETQEVLAPSHLLIRPEDTSAEPVEAPPTVLSRLEENDFSGHHI
SEETTEPAKINEQDSTVTEAGQGSSESTSVTQETLREDIGSGVTVLPGVSNGKDQKGQKG
GNGLTGPPRGPGVDERQKKDQGPPGPPGKPGQDGPPGLPGPPGLDGMVGPPGPKGEKGDR
GLLGSVGPKGETGITGSIGPKGQAGADGPPGKPGPPGPPGPPGPPGPPGPSYGLGFEDME
GSGSIAVLSESKTPGTRGPKGEVGYIGLPGSKGMPGTNGRPGFPGIAGRPGAVGPKGEKG
DPGPQGEPGQDGTSIVGPPGPPGPPGPIIGIPELLLNDTDGIFNSTAIKGLVGPPGPDGK
PGLPGFPGPRGPKGDTGLPGLQGPKGQRGEKGEPGALVAADGSLTELLGRKGQKGEAGAV
GQAGPMGPVGPAGPKGELGFPGRPGRPGLNGMRGVKGERGEALHGPPGLPGPPGPPGPPG
RIVYIKGTVFPISPRPHCKMPVNPPYPGNQEALNVQDAKGSGNSWGTHSSANIKGEKGET
GAPGPPGPPLPPSYFSHFINSIKGEKGDNGGPGVKGEKGEPNGGFFLTGPPGPPGRPGSI
GPKGDSVVGPRGPPGLPGLPGLPGYGKIGPPGPPGPPGPPGPPAIYGSAPAIPGPPGPPG
EPGLPATRNLVTTFRNVEGMLEKVHFVAEGTLIYLSETSEVFIRVRNGWRKLQLGELIPI
PADSLPPPALSSHGFQSLPALSPISNVNNGKPALHLVALNLPLAGDMRADFQCFQQAQLA
GLTSTYRAFLSSHLQDLATVVRKTDRYNLPIVNLKGETLFSNWESIFNGNGGQFNPHVPI
YSFDGRNVMTDPSWPQKVIWHGSTANGIRLVSNYCEAWHTADIAVMGQASPLKTGKLLDQ
KAYSCSNQFIVLCIENSFISDAQGK
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgctctcgtggcatgcctggtggacctgggacttgctactactgctcttaggcttgtca
agccatgctggttcagcggctcagatcatagaagaacgaggctcaaaaggacatcttgat
ctcacagaactaataggagttcctctccctccctccgtctactttatcacgggctatgga
gggtttccagcttacaacttcggcccagatgctaacatcggcagattgacaagtgctata
gtgccgctgcctttctacagagatttcgctatcgtggttacagtgaaaccaaacagtgat
cggggaggagtgctctttgcaataacagatgcctttcagaaaactatttacctgggaatg
aggctttcaccggttgatgacaacacccagagaataattatgtactacacagagccaggt
tcccatatttcccgagaggctgcttcgttcaaagtaccagtgatgactaacaggtggaac
agatttacagtgactgtgcagcgaaatgaaattgctttgttcatggactgtgaagagtat
cagaggattcagtttcagagatcaaatcgagccttgatgtttgaatctggctctggtata
tttgttggcaatgcaggagcaacaggattagagaaattcacaggctctattcaacatctg
acaatcaaatctgatccaagggctacagaagaccaatgtgaagatgatgatccttatgct
tcaggagacatgagtggcaatggcagcgttcaagaacaagaaggtattccagagacacaa
gaagtgcttgcaccttctcatcttctcataaggcctgaagatacgtcagctgagccagtg
gaagctcccccaactgtattgtctcgtttggaagaaaatgatttctcaggacatcacata
tcagaagaaaccactgaaccagctaaaattaatgaacaagattcgactgtcacagaagct
ggacaaggcagcagtgaatctacctctgtcacacaggaaacgttaagagaagatattggc
tctggtgttactgttttgccaggagtgagcaatgggaaggaccagaagggtcagaaagga
gggaatgggctcacaggacctccaagagggccgggagtggacgagaggcagaaaaaagat
caaggacctcctgggcctccaggaaaacctggccaagatgggcctccgggattgcctggt
cctcctggtcttgacggaatggttggcccaccaggaccaaagggagaaaaaggcgatcga
ggtcttcttggttctgttggtccaaagggtgaaactggaataactggatcaataggtccc
aaaggacaagcaggagctgatgggcctccagggaaacctggaccacctggacctcctgga
cctcctggacctcctggacccccaggtccaagctacggtttgggatttgaggacatggaa
ggatcagggagtattgctgtgttaagtgaatccaaaactcctggaacaagagggccaaag
ggtgaagtaggttacattggcctgccaggttcaaagggaatgccaggtacaaatggaaga
ccaggttttcctggcatcgctgggcgtcctggagcagtgggcccaaaaggggagaagggt
gacccaggacctcagggtgaaccaggacaggatgggactagtatagtgggtccacctgga
ccacctggaccaccaggaccaatcataggtatacctgagctactactgaatgatacagat
ggaatttttaattcgactgcaattaaaggattggttgggcccccagggccagatggcaag
ccaggtctaccaggatttcctggccctcggggaccaaaaggagatactggcttacctgga
cttcaaggacctaaaggacaacggggtgaaaagggagaaccaggagctctcgttgctgct
gatggatctttaactgaattattaggaagaaaaggacagaagggagaagctggagcagta
ggacaggcgggaccaatgggaccagtaggacctgctggacccaaaggagaacttggtttc
ccaggacgcccaggccgcccaggactgaatggaatgagaggagtgaaaggtgaacgaggc
gaagcgttacatggcccccctggcttgcctggacctccaggaccccctgggcctccagga
cggatagtttatatcaaaggaacagttttcccaatctctcccagacctcattgcaaaatg
ccagtgaaccctccttacccaggaaatcaagaagctcttaatgtccaagatgcgaaagga
agtggaaattcctggggaacgcacagttcagcaaacataaaaggagaaaaaggagaaaca
ggggctccaggaccaccaggtccacctctgcctccatcatatttcagccactttattaat
agcataaagggtgaaaaaggagacaatggaggccctggtgtaaaaggagaaaaaggagag
ccaaatggaggtttttttctgacgggacctcctggacctcctggaagaccgggatcaatt
ggaccaaaaggggattctgttgttggacccagaggacctcctggattacctggactacct
ggtttaccaggttatggaaaaattggacctcctggaccaccgggaccaccaggaccaccc
ggtcctccagcaatatatgggtcagcacctgcaattcctgggccaccaggtcctccagga
gagccagggctgcctgcgaccaggaatctggttacaacgttccgcaatgtagagggtatg
ttggaaaaagttcattttgtagcagaaggtacactaatctatctgagtgaaaccagtgag
gttttcatccgtgttcgaaatggatggagaaaattgcagcttggtgagttaattcctatc
cctgctgacagccttccacctccagccttatcaagccatggatttcagtctcttccggca
ttgagtccaatttcaaatgtgaataatggaaaaccagcactgcatctggtggctttaaat
ttgccgttagctggtgacatgcgagcagattttcagtgctttcaacaggcacagctggca
ggcttgacatctacctatagagccttcctgtcatcacatttgcaagatctagccacagtt
gtaagaaaaacagacagatacaatttaccaatagtcaatcttaagggagaaacacttttc
agtaactgggaatcaatatttaatgggaatggtggacaattcaaccctcatgtaccaata
tactcatttgatggaagaaatgtcatgacagatccatcttggcctcagaaagtaatatgg
catggttcaactgcaaacgggatccgactggttagcaactactgtgaagcctggcataca
gctgatatagcagttatgggacaagcatcaccactgaagacagggaaacttcttgatcag
aaagcatatagctgtagtaatcagtttatcgttctctgcattgaaaacagtttcatatct
gatgctcaaggaaaatag
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