Nothoprocta perdicaria (Chilean tinamou): 112953249
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Entry
112953249 CDS
T07556
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npd03036
]
112953249 (TRERF1)
Chromosome and associated proteins [BR:
npd03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
112953249 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
Myb_DNA-bind_7
Zn_SUZ12
Myb_DNA-bind_6
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
112953249
NCBI-ProteinID:
XP_025902061
Ensembl:
ENSNPEG00000009219
LinkDB
All DBs
Position
Unknown
AA seq
1162 aa
AA seq
DB search
MGDQQLYKTNHTANSNENLYYQQHQMNSLPSINHSYGTSVMDAPQASPLSPPFPQDSRDS
VALPGGSKSLGSMDTSRQTSWTHSVSGNHVPLRNNLNNQNAMWSPLGPGESHDGYQYSYS
QPSENRSQKITSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHAESSLADGSGDSALRQLL
SQKPAVEQQPATSSVQRYQTGPQQTHPNFANAQQKQQMQVMQHPQLYYDYQQHLSQMQMH
SAFQPGQPHVQQMQSAQLLPQQMQHLPQPQYYAQPQQGHQRLSVQELQQQQPARQQPQRQ
CPMQIAQYYPTQPVVQQQQHMQLQLPPYHREADPKTMHEPHQYSQDPSHPVQLIQLGAVP
QYCYQDPHEQYRHLYPQSLLQQQEDQQKQYPNESRGPSLNSHVGLTPPETAEDPAQQEAS
SVGNTVPHRTLLPLSGAHLNNKSSQQDSPSTMWPQQMQLSDGRLQPLSPEQSGQNREAFP
ERGDVKNKLTCSICLKEFKSLPALNGHMRSHGGVRASPNFKQDEGEKPPQQPLPKEVESL
APIVMPVSVPVKLLSPEPSTQPSANSAAVKDKPGKPVSDDEMPVLVKMTCSPPRSPKVAN
PCSSAEISKKPLPSAAKLEENFKPLQDKKKYRHRPEPLFIPPPSFNFSMPHSGATLYQSQ
LRSPRVLGEHLLERARELPPYTPPPMLSPVRQGSGLFSSVLTAAHGAAHAQLPLTPLTPT
PRVLLCRSNSIDGSVIPVTPGPGEQTVEPRINIGSRFQADIPELQDRLLMEKDVHKATLV
WKPWPELENKVFQQRVEDLLNMSCSSVLPGGGTNSEYALHSLFEAKGDIMVALEKLLLRK
PVRLKCHPLANYHYAGSDKWTHQERRLFKEALSTYSKDFIFVQKMVKSKTVAQCVEYYYT
WKKILRLGRKHRTRLEKKREECLTSGEEEVLEEDEEVEEDRKEERELQKSPEPPAIPLVG
PIDLPALQSLTLSSSSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKTRCPLPGTKQK
SGTQSGYCSIKSSPAHSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMKTHRQQEEQQRQ
KAQKAAVAAEMAATIARTTGPVGHGVIPLDHMGLVKHVENVGDVEDDVVQELGDVMEENE
VVDADLLLDDEDADLLHDDAEL
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcaattgtataaaaccaaccatactgccaacagcaatgagaacttgtac
taccaacagcaccaaatgaactcccttccatccataaatcacagttatgggacatctgtc
atggatgctcctcaggcgtccccactgtccccgccgtttccccaagattcaagggacagt
gtagctttgcctggagggtcaaaaagtcttgggtcaatggacacatctagacaaactagt
tggacgcattctgtctcaggaaaccatgtccctttaaggaacaatctgaataatcaaaat
gcaatgtggagccccctgggcccgggcgagtctcatgacggataccaatattcttattct
caacctagtgaaaatcgatcacaaaaaattaccagtggggtcctgcataaattggactcc
tttacgcaagtctttgcgaaccaaaatctacgaattcaagtcaacaacatggctcaggtt
ttgcacgccgagtcttcgctagcggatggttctggggacagtgcactcaggcagctgctc
tctcagaagccagcggtggagcaacagccggcaacttccagcgtgcaaagataccaaacg
ggaccgcagcaaacacaccccaattttgcaaacgcgcagcaaaagcaacaaatgcaagtc
atgcagcacccccagctgtactatgactaccagcagcacttatcgcagatgcagatgcac
tctgcctttcagccaggacagccacacgtgcagcaaatgcagtctgcgcagctgctgccg
cagcagatgcagcacttgccgcagcctcagtactacgctcagccgcagcagggccaccag
cggctctccgtgcaggagctccagcagcagcagccggcccggcagcagccacagaggcag
tgtccaatgcaaatagctcagtattacccaacgcaacctgtcgtgcagcagcagcaacac
atgcaattgcagcttcctccgtaccacagggaagctgatccaaagactatgcatgaacca
caccagtactctcaggatccgagtcatcctgtacagctcatccagttgggagcagtgcct
cagtattgctaccaagacccccatgaacagtataggcatttgtacccacagagtttactg
cagcagcaagaggatcagcaaaagcaatatccaaatgagagccgaggcccctctctgaac
tctcacgttggcctcactccaccagagacagcggaggatccagcacagcaggaggctagt
tctgtaggcaacactgttcctcatcgaacccttctgccactgtcgggagctcatctgaac
aacaaaagctctcagcaagactctcccagcactatgtggcctcagcagatgcaactgtca
gatggcagactgcagccactgtccccagaacaaagtggccagaacagagaagcatttcct
gagagaggtgacgtgaagaacaagctaacatgttcaatatgcttgaaggagtttaagagt
ttgcctgctctgaatggtcacatgaggtcacatggaggagtgagagcatctcctaacttc
aaacaggatgaaggagagaaaccaccacagcagccgctgcctaaagaggtggaaagcctc
gcacccatcgtcatgccagtgtctgtccctgtaaagcttctgtcacccgagcccagcacg
cagccctctgccaactctgccgcagtcaaagacaagcctggcaagcccgtgtcagatgac
gagatgcccgttctcgtgaagatgacttgctctccgccgcgcagccccaaagtggccaac
ccctgctcgtccgctgaaatcagcaaaaaacctcttccaagtgctgcaaaattagaagaa
aacttcaaaccgctgcaggacaagaagaagtatcggcacagacccgagcctctcttcatc
cctcctccctccttcaacttcagcatgccccactccggtgccaccctgtaccagagccag
ctgcgctcgccgcgcgtcctcggcgagcacctgctggagcgggcgcgcgagctgccgccc
tacactccgccgcccatgctgagccccgtgcgccagggctccggcctcttcagcagcgtc
ctcacggcggcgcacggcgccgcgcacgcgcagctgccgctcacgccgctcacgcccacg
ccccgcgtgctgctctgccgctccaatagcattgatggaagtgtcattccagtgacgcct
gggcctggagaacagactgttgaaccacgaatcaatattgggtccaggttccaggctgac
attcctgagcttcaggacagattactaatggagaaagatgtgcacaaggctactttggtt
tggaaaccatggccagaactggagaataaagtcttccaacaaagagtggaagacctctta
aatatgagctgttccagtgtgttgcctggtggaggaactaactcggaatatgctttgcac
tctctctttgaggctaaaggagatattatggttgcccttgagaagctgctgctgaggaag
ccagtgagattgaagtgtcatcctttggcgaattaccactacgcaggctctgacaaatgg
acacatcaagaaagaaggctattcaaagaggctttgtctacctacagcaaagattttata
tttgtacagaaaatggttaagtctaagacagttgcacaatgtgtggaatactactatact
tggaagaaaatcttgcgtttgggacggaagcacagaacacgtctggagaagaagagagag
gaatgcctgacaagtggagaagaggaagttctagaggaagatgaggaggtggaagaagac
agaaaggaagaaagagaactgcagaaatctcctgagccacctgctatccctcttgttggg
cctatagacctgcctgcccttcagagtctcacactttcttcatcctccttcatctgtgaa
atgccaaactgcggcgctgtgttcagttcccggcaggcgctcaacggccacgctcgcatc
cacgggggcaccaaccaggtgaccaaaacgcgatgccccttgccgggcacgaagcagaag
tcgggtacgcagagcggatactgctccatcaagagctcacccgcccacagcacaactagc
ggcgagaccgaccccacaaccatttttccttgtaaggagtgtggcaaggtatttttcaaa
atcaaaagccgcaacgctcacatgaagactcacagacaacaagaagagcagcaaaggcag
aaggctcaaaaagctgctgtagcagccgaaatggcagccactatcgcaagaactactggg
cctgttgggcatggtgtgatccctctggatcacatgggtttggttaaacacgttgaaaat
gtaggtgatgtggaagatgacgtcgttcaggagttaggtgacgtcatggaagagaatgaa
gtcgtggatgctgacctcttgttagatgatgaagatgcagacctgctgcacgatgatgct
gagctgtaa
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integrated database retrieval system
