Nothoprocta perdicaria (Chilean tinamou): 112953291
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Entry
112953291 CDS
T07556
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
npd00536
]
112953291 (COL13A1)
Glycosaminoglycan binding proteins [BR:
npd00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112953291 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
112953291
NCBI-ProteinID:
XP_025902102
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MREEKSWEGGAGASDGXPPMAAPSAASSGRPGGGGAERCGRLPLLLGSGLPGASLLSLAL
GLLLCFRTAELQSRLSRLEAQRAPAWLPDAAILGRVDQLLDERLKLHVPRHREVRDAHQR
CNCPAGPPGDKGAMGIPGRPGLKGQPGEKGAPGEAGMSVMGPRGPPGQPGTRGFPGFPGP
IGLDGKPGHPGQKGETGAAGPRGHPGPPGQKGEKGQCAEYPHRLLPLLNSVRLAPPPVIK
RRTFQGEQGQAGIQGPPGPPGPPGPAGPQGAPGQPGPPGRAGEAGRPGRDGEGSPGPPGA
KGDPGAQGHPGRKGERGLPGLPGRHGAKGAAGVAAVGMKGEPGTPGEKGEPGVPGRMGPP
GLPGKRGQRGEPGVPGERGPMGPRGPKGEPGKDEMMDYDGNISEALQEIRTLALMGPPGL
PGVAGPPGPPGQKGEIGLPGPPGHDGEKGPRGKPGETGAPGPHGLPGRDGPPGMKGEPGH
VGEKGERGEPGQIGLPGLDGPSGEKGERGDQGMPGPSGLPGPSGLPGLTGEKGEAGQRGE
KGHPGESIPGPPGPQGPPGPPGLQGFPGPKGEVGTDGVKGEKGAQGEKGDRGPLGLPGAS
GLDGRPGPPGTPGPIGVSGPAGPKGERGSKGDPGXAGPMGPAGLPGLQGLPGDKGSRGER
GKKGSRGSKGDKGDQGAPGLDAPCPLGEDGLPVHGCWNK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaggagaagagctgggaaggcggcgccggtgcctccgatgggrcacctccgatg
gcggcaccgtcagcggcatcaagcgggcggcccggcggcggtggcgcggagcgatgcggc
cgcctgcccctgctgctgggctcggggctgcccggcgcctcgctgctctcgctggcgctc
ggcctcctgctctgcttccgcacggcggagctgcagtcgcggctctcgcgcctggaggcg
cagcgggcgcccgcctggctccccgacgccgctattctgggaagagtcgaccagctgctc
gacgagaggctgaagctccatgtgccgagacaccgggaggtccgagacgcgcaccagcga
tgcaactgcccggcaggcccgcctggggacaaaggcgccatgggcatcccgggacggccg
ggactcaaggggcaacccggagagaagggagcgcccggagaggcgggaatgtccgtcatg
gggccccgcgggccgcccgggcagcccggcacgagaggctttcccggctttccgggccct
atcggcttggacggcaaaccgggccatcccggacagaagggagagacgggcgccgccggc
ccccggggacacccaggaccaccaggacagaaaggagagaagggccagtgcgccgagtac
ccgcacaggctgctgcctctcctcaattccgtgcgcctggctcctcctccggtcattaag
agacgcacgttccagggcgagcagggccaagcgggaatacaaggcccgccgggacccccc
ggcccrccagggcccgccggaccccagggcgccccaggacagcccggcccccctggcaga
gcgggtgaagccgggaggcccggcagagacggcgagggctcgcccgggccgcccggagcg
aagggagaccccggggcgcagggccaccctggcaggaagggggagagaggcctgccgggg
ctgccgggaagacacggcgctaagggcgctgctggtgtggctgctgtgggcatgaagggy
gagccggggactccaggagaaaagggagagcctggagtccccgggaggatgggcccccca
ggtttgccggggaagagggggcagcggggggagccaggagtgcccggagagcggggaccc
atgggcccacggggccccaaaggagagcctgggaaggatgaaatgatggactatgatggc
aacatcagcgaagctctgcaggaaatacgaactttggccctgatgggacccccaggactc
ccaggtgtggctgggcctccagggccaccaggacagaagggtgaaattggtttgccgggt
cctccaggccacgacggagagaagggaccacgaggcaagccaggagaaacgggtgcccct
ggccctcacggactgccaggacgggacggaccgcccgggatgaagggagaaccaggacac
gttggagaaaagggggagagaggagagccaggacagatcggcttaccgggtcttgatggc
ccttctggagagaagggagaacgaggtgaccaggggatgccaggaccatcaggactgcca
ggtccctccggactgccgggactgacaggagaaaagggagaagctgggcagcgcggcgag
aaaggacatcccggagagtcgataccaggtccccctggaccccaaggccccccaggacct
ccaggtctgcagggctttccaggacccaagggggaagtgggcacggatggagtgaaagga
gagaagggtgcccagggtgaaaagggagaccgagggccactgggattacccggtgcctcg
gggttggacggcagacccggaccgccgggtactccaggaccaattggggtttcgggacca
gcaggaccaaaaggggaaaggggcagtaaaggagaccctggagytgcaggaccaatgggg
ccagcagggcttcccggtttacaaggtctacccggtgacaaaggaagccggggggagagg
ggcaagaaaggctctagagggtctaaaggggataagggagaccaaggagcgcctggatta
gatgcaccctgcccgttgggagaagacggcctgcccgttcacggctgctggaataagtga
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