Nothoprocta perdicaria (Chilean tinamou): 112953572
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Entry
112953572 CDS
T07556
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112953572 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npd03019
]
112953572 (CPSF2)
Messenger RNA biogenesis [BR:
npd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
112953572 (CPSF2)
U7-dependent histone pre-mRNA processing factors
112953572 (CPSF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
112953572
NCBI-ProteinID:
XP_025902442
Ensembl:
ENSNPEG00000005554
UniProt:
A0A8C7EB80
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLCGVQEESALCYLLQVDEFRFLLDCGWDENFSMDVIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHSLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDSKNSIILTYRTT
PGTLARFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDAEEDVDQPTVHKTKHDLMMKGEGNRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGEEPVDQDLSDVPTKCISATESMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASLDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELREDEDLE
MQVDVPSADSSVIAQQKAMKSLFGDDDKEMCEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaattatcaagctgaccacgctctgcggcgtgcaggaggagtctgccctctgc
tatctactgcaagtggatgaatttcgctttctgttggactgtggctgggatgagaacttt
tccatggatgttattgattcactcagaaaacatgttcaccaggtcgatgctgttcttctt
tctcatcctgaccccttacatcttggggcacttccatatgcagttggaaaaatgggctta
aactgtgccatttatgcaactattcctgtatataaaatgggacagatgtttatgtatgat
ctctatcagtcccgccataacacagaagacttcactctcttcacgttggatgatgttgat
gcagcctttgacaaaatacaacagctgaagttttctcagattgtcaacttgaaaggcaaa
ggccatggtctgtcaatcacaccgttgccagctggtcacatgataggaggcacaatctgg
aagattgtcaaagatggagaggaagaaattgtttatgcagtcgatttcaaccacaagagg
gagattcacctgaatggatgttccttggaaatgctgagcagaccttcgttgcttattaca
gattcatttaatgccacttacgtccagcctaggaggaagcagagagatgaacagctactg
actaatgttttggagaccctacgaggtgatggaaatgtattgatagctgtggacacagca
ggcagagttctggaacttgctcagcttcttgatcagatatggagaacaaaagacgcagga
ttaggagtctactccctagcacttttgaataatgtcagctacaatgtagtggaattctct
aaatcacaggttgaatggatgagtgacaaactgatgaggtgctttgaagacaagagaaac
aatccgtttcagttccgtcacctctccttatgtcacagcctgtctgatttggctcgagtg
cctagtccaaaagttgttcttgctagtcagcctgatttagaatgtggcttttctagagat
ctcttcattcagtggtgccaggattctaaaaactctattattttaacttaccgcactaca
cctggaacgttagcacggtttctgattgataatccttctgaaaaagttatagatattgag
ttgagaaaacgtgtcaaattggagggaaaagaacttgaagaatacctagaaaaggagaaa
ctaaagaaagaagcagctaagaagttggaacaatccaaagaggcagatatagattccagc
gatgagagtgacgctgaagaggatgttgatcagccaactgtgcataagaccaaacatgat
ttaatgatgaaaggggaaggtaatcggaaaggaagtttcttcaaacaggcgaagaaatct
tatcccatgtttccagctcctgaggaaagaattaaatgggatgaatatggagagattatc
aaaccggaggattttctggttccagaacttcaagcaacagaagaagaaaaaagcaaatta
gagtctggtttgacaaatggagaagaacccgtggaccaggatttatcagatgttcctacc
aaatgtatttcagcaacagagtccatggaaatcaaagctagagttacctatatcgactat
gaagggcgttcagatggtgactcaattaaaaaaattattaaccaaatgaagccgagacag
ctgatcattgtccatgggcctcctgaagccagtctggaccttgcagagtgttgcagagct
tttggtggaaaagatattaaagtttacatgcccaaactgcacgaaactgtagatgcaact
agtgaaactcatatctaccaggtcaggttaaaagattccctggtcagctcccttcagttc
tgcaaagccaaagatgccgagctggcttggatagatggtgtcttggacatgcgagtttcc
aaagtggacactggagttattttggaagagggagagctgagggaggatgaagacttagag
atgcaggtggatgtgccttctgcagactccagtgtcattgcacagcagaaggccatgaaa
agcctgtttggagatgatgataaggaaatgtgtgaggagagtgagatcattcctactttg
gaacctctgccacctcatgaggttcctggtcatcagtctgtgtttatgaacgagccaagg
ctgtctgacttcaagcaagttcttctgcgggaaggtattcaggctgagtttgtaggaggg
gtgctcgtgtgcaacaacctggtggccgttcgcaggactgaaacaggacgcattggattg
gaaggctgcctctgtcaggacttctataggataagagaccttttatatgagcaatatgct
attgtctaa
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