Nothoprocta perdicaria (Chilean tinamou): 112953644
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Entry
112953644 CDS
T07556
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112953644 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npd03041
]
112953644 (DDX5)
03009 Ribosome biogenesis [BR:
npd03009
]
112953644 (DDX5)
Enzymes [BR:
npd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112953644 (DDX5)
Spliceosome [BR:
npd03041
]
Complex A
U1 snRNP components
U1 related factors
112953644 (DDX5)
Complex B
112953644 (DDX5)
Ribosome biogenesis [BR:
npd03009
]
Eukaryotic type
Pre-60S particles
Helicases
112953644 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
112953644
NCBI-ProteinID:
XP_025902520
Ensembl:
ENSNPEG00000006040
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MSGYSSDRDRGFGAPRFGGSRGGLLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VVRRTAQEVEQYRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLVEDRGAGRSR
GDRRDRYSAGKRGGFSSFRERENFERTYGALGKTRDFGAKAQNGAFSTQSYSNGTPFGNG
FAAAGMQAGFRAGTPAAAAAAAAGAYQNGYEQQYGSNIANMHNGMNQQQYAYPATGTAAP
MIGYPMPTSYSQ
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggtattccagcgacagggacagagggtttggagcccctcgtttcggggggagt
agaggtggactgctatctggaaagaagtttggaaaccctggggaaaagcttacaaaaaag
aaatggaacttagatgaactgccaaaatttgagaagaacttttatcaagaacatcctgat
gtagttagacgtactgcgcaagaggttgaacagtacagatcaagcaaagaagtaacagtc
aggggccataactgtccaaaaccaattataaacttttatgaagctaactttcctgcaaat
gttatggaagtgattcagaggcagaacttcaccgaaccaactgctattcaagcacaagga
tggcctgttgccttgagtggactggatatggttggagtagcgcagactggatcagggaaa
acactgtcttacttgttgcctgccattgtgcatataaatcatcagccattcctggagcga
ggagatggacctatatgtcttgtactggcaccaactcgtgaactggctcaacaagtgcag
caggtagctgcggagtatagcagagcatgccgtttgaagtctacctgtatttatggaggt
gctccaaagggaccacaaattcgtgacttagaaagaggtgtggaaatctgcattgcaaca
cctggaagactcatagacttcttagaagctggaaagaccaatctcaggaggtgcacttac
cttgtacttgatgaagctgaccgaatgcttgacatgggatttgaaccacagatcagaaaa
attgtagatcagatcagacccgataggcagactctgatgtggagtgcaacctggccaaag
gaagtaagacagctggctgaagactttttgaaagagtatgtgcacatcaatattggagca
ttagaattgagtgcgaaccacaacattcttcagattgtggacgtgtgtcacgatgtagag
aaagatgacaagcttattcgtttgatggaagaaatcatgagtgagaaggaaaacaaaaca
attgtttttgtggaaaccaaaagacggtgcgatgaccttaccaggaaaatgaggagagat
gggtggccagcaatgggtatccatggtgataaaagtcagcaggagcgggactgggttcta
aatgaattcaaacatgggaaagcaccaatcctgattgctacagatgttgcatccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctcagaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatacacattc
tttactcctaacaatattaagcaagtaaatgacctcatctctgtgcttcgagaggctaat
caagccatcaaccccaaattgcttcagttggttgaagacagaggtgcaggtcgttccaga
ggtgatcgacgtgacagatattctgcgggcaaaaggggtggatttagtagttttagagag
agggagaactttgagagaacttatggtgcgttaggaaagaccagagactttggagcaaag
gctcaaaatggggcctttagtacccaaagctacagtaatggaactccttttgggaacggt
tttgcagctgcaggcatgcaggctggcttcagggctggtacccctgcagcagcagctgca
gcagcagcaggcgcttaccagaatggctatgagcagcagtatgggagtaacattgcaaat
atgcacaatggcatgaaccaacagcagtatgcgtatcctgccactggcactgctgctcct
atgataggttacccaatgccgacaagttattctcaataa
DBGET
integrated database retrieval system
