Nothoprocta perdicaria (Chilean tinamou): 112954010
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Entry
112954010 CDS
T07556
Symbol
COL22A1
Name
(RefSeq) collagen alpha-1(XXII) chain
KO
K16630
collagen type XXII alpha
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
112954010
NCBI-ProteinID:
XP_025902938
LinkDB
All DBs
Position
Unknown
AA seq
1601 aa
AA seq
DB search
MLVMGRCRLPHLLVLLAFVFSGEKSQAQRAGCKNVHYDLVFILDASSSVGKEDFEKVRQW
VSNLVETFEIGPDKTHVGVVRYSDRPTTEFDLGRYKTRQEIKEAAQKIKYYGGNTNTGDA
LRYINSYSFSKEAGGRLSDQTVKKVAILLTDGRSQDYVLDAATAAHQAGIRIFAVGVGEA
LKEELDEIASEPKSAHVFHVSDYNAIDKIRGKLRRRLCENVLCPNVHVEGDRFKHTTGGT
DEIPGFDLMDSFSVRQIFGMKERGIQSSYVRLGSFPIVQKTEDVFPQGLPDEYAFVTTFK
FRKASRREDWYIWQIIDKYGIPQVSIRLDGENKAVEYNAVGLTKDAVRVVFRSTRVSDLF
DRSWHKIALSIQSDAVTLYIDCRLVQTLPIEDRENIDIQGKTVIGKRLYDSVPIDFDLQR
MVIYCDSRHAELETCCDIPSGPCQVTVLTEAPPLEVKPTVGNEQVGHLKTVNCSCPAGEK
GERGQVGPEGPRGQKGESGSQGLPGLRGEKGESGRAYGRGEKGEKGSLGSPGPPGKDGAK
GETGEPGQPGEFGLPGPAGPKGSEGKQGPPGIKGYVGAPGLQGERGEKGTRGDKGEKGLD
GFPGKPGMEGKQGPAGSPGPPGASGIKGEKVSRKGGEPGLPGLPGTSVHTEGIKGQQGEP
GPRGPPGQPGLPGPPGMAGPEGKPGVPGLPGQRGKKGEPGFPGINGLIGPQGPPGPPGIA
GPPGPPGASGLPGEIGVAGKTGPPGPAGLPGKDGLNGLPGLPGQKGEQGEKGEEGFPGKA
GPKGEPGSRGQTGEQGEAGLPGPQGSPGLRGQKGDQGEKGKDGLPGFKGERGEKGDMGSP
GPPGLPGTTAFFTPHPRIPGEPGPKGEKGDRGMSGEPGLPGVPGEQGVPGLAGLEGSKGQ
KGARGEAGAPGETGAAGPAGPPGLRGLPGNVGAPGDPGLPGKDGEKGEKGDPGTEGKPGV
PGPAGQPGPAGEPGLPGKGKDGQQGERGPPGLPGPFGHKGERGAPGLPGQPGDRGVPGIG
LAGPPGPVGPPGDKGSLGLRGVPGIPGPQGPPGHDGLPGNPGERGPPGKPGSSPLLSPED
INLLVKDVCSDCPPGPPGLPGIPGFKGDKGLRGPPGRDGQDGKMGIAGPRGPAGPPGLDG
AKGVKGDRGATGDVGEKGEQGHPGMPGFAGLPGNPGPPGPDGAPGSIGPAGNPGDIGKDG
PPGPQGPPGVPGLPGIAGNDGKDGKPGSLGEPGKPGEPGLPGQEGARGLPGFKGQRGDTG
PPGPQGEPGATGPAGREGPPGKDGDTGPVGPQGPRGLRGPPGKNGLPGPVGEPGPAGNPG
PKGNKGENGSPGLPGFVGPRGPPGEPGEKGPPGKEGVPGKPGETGSRGERGQPGIKGEKG
SPGEKGPPGDPGIPGHKGHPGLMGPHGPPGDNGQVGPPGPPGQPGFPGPRGEPPSLETLR
RLIQEELAKQLDAKLAYLLAEMQPAHVKASHGRPGPPGPPGKEGLPGRAGPPGEPGRPGQ
TGSEGPPGPIGPKGERGAKGEKGDTGVGQRGEIGPPGIPGLPGEPGYAKDGMPGXPGPQG
EAGLPGLMGPQGPPGANGQCDPSQCAYYASLAARPGNVKGP
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atgctcgttatgggaaggtgccgtttaccccatctcctggttcttcttgcgtttgtgttc
agtggagagaaaagccaggcgcaaagagcaggttgcaagaacgtacactatgaccttgtt
ttcatcttggatgcctcctccagtgttggaaaagaagattttgagaaggttcgacagtgg
gtgtctaatttggtggaaacttttgagattggcccagataaaacccatgtaggtgtggtg
cggtacagtgatcggccaaccacggagtttgacctaggaaggtacaaaactcgtcaggaa
attaaagaagctgcccaaaaaattaagtattatgggggtaacacaaacactggagatgct
ctcaggtacatcaacagttacagtttttccaaagaagcaggtgggagacttagtgaccaa
actgttaaaaaggtggctatccttctgacggatggaagaagccaggattatgtcttagat
gcagccaccgcagcccatcaggctgggattaggatttttgctgtgggtgttggtgaagcc
ttaaaagaggaactggatgaaattgcttcagaacccaagtctgctcatgtgtttcatgtt
tctgattacaacgccattgataaaattcgggggaagttgagaagacgtctttgtgaaaat
gttctgtgtccaaatgtccatgtggaaggagaccgattcaaacacaccactggagggact
gatgagattccaggatttgacctgatggattcgttcagtgtgagacaaatttttggaatg
aaagaaagaggaattcagagctcttacgtgcgacttggaagcttccccattgttcagaaa
actgaggatgtgttcccacaaggtctgcctgatgaatatgcctttgtaactaccttcaaa
ttccgaaaggcttccaggagagaagactggtatatttggcaaattattgacaagtacggc
ataccacaggtctcgatccgactggatggggagaacaaggcagtagagtacaatgccgta
gggctcaccaaggatgctgtgagggtggtctttcgaagcactcgagtcagtgatcttttt
gaccgcagctggcataaaatcgccctcagcattcagtcagatgctgtcaccctttacata
gattgcagactggtgcagacactgcctatagaagacagggaaaatatcgacattcaagga
aagactgtgattggcaaacgcttgtatgatagcgttcccattgactttgatctgcagcgg
atggttatttactgtgattctcgacatgctgagctggaaacctgctgtgacattccctct
ggaccatgccaggtcacggtcctgacagaagcaccaccccttgaagtgaagcccactgtt
ggcaatgaacaagttggccacctcaagactgtcaattgctcctgtccagctggagaaaag
ggagagaggggccaagttggtcctgaaggtcctagaggtcaaaagggagaaagtggcagc
caaggacttcctgggctccgaggagaaaaaggagagtcaggcagagcttatggcagagga
gaaaaaggagaaaaggggtccctgggctcacccggtccccctgggaaggatggagcaaaa
ggagaaaccggtgaaccaggacagccaggagaatttggactgcctggaccggcaggtcca
aagggatctgaaggaaaacaaggtcctccaggaattaaaggctatgtaggagcaccgggt
ctacaaggagaaagaggagaaaagggaacacgtggagataagggagaaaaaggcctagat
gggttccctggaaagccaggcatggaagggaaacagggccctgctggcagcccaggccct
ccaggtgccagtggaatcaaaggagaaaaggtgagcaggaaagggggtgaaccagggctt
ccaggactgccaggcacttctgtacacactgaaggcataaaaggacagcagggagagcct
ggcccacgtggaccaccaggtcaacctggacttcctggaccaccaggaatggctggtcca
gaaggcaagcctggagtccctggtttaccgggtcaacggggtaagaagggagaacctgga
ttcccaggaatcaatggtctgattggacctcagggacctccagggccccctggcattgct
gggcctcctggacctcctggagcatctggcctgcctggagagattggtgttgctggcaaa
actggacctccaggaccagctggattgcctggcaaagatggactaaatggtcttcctgga
cttccaggtcaaaagggagaacaaggagaaaagggtgaagaaggctttcctggaaaagct
ggccccaagggtgaaccagggagtcgtggccaaactggcgaacagggtgaagcaggcctt
cctggccctcaaggttcacctggactgagaggacagaagggagatcagggagaaaaagga
aaagatggcctccctggatttaaaggtgaacgaggagaaaagggtgacatgggttcccct
ggaccaccaggcttacctggaacaacagccttctttaccccacaccccagaattcctggt
gaacctggaccaaaaggggagaaaggagatcgaggaatgagcggagagcctggattacct
ggggtcccaggtgaacagggagtcccaggacttgcaggacttgagggttcaaaggggcag
aaaggagcccgaggagaagctggagcccctggagagactggtgcagctggaccagcagga
cccccaggtctaagaggcttgccaggaaacgtgggagcacctggagaccctggacttcca
ggaaaggatggagaaaagggggaaaagggtgatccaggaacagaaggaaaaccaggtgta
cctggcccagctggtcagccagggcctgctggagaacctggtttacctggcaagggtaaa
gatggacaacagggagaaagagggccaccaggcttgccaggaccctttggacataagggt
gaaagaggagctcctggcctccctgggcagccaggagatagaggtgtaccaggaatcggg
ttggctggaccccctggccctgtaggacccccaggagacaaagggtcattgggtctgcga
ggtgtacctggtatccctgggccacaggggcctcctggtcatgatggtcttcctggaaat
ccgggagaaagaggacctcctggaaaaccaggttcctctcccctgctctctccagaggac
atcaatctcttagtgaaggatgtgtgcagtgactgtccccctggcccgccaggactaccc
ggaattccaggtttcaaaggtgataaaggtctccgaggaccaccgggtagagatggccag
gatggcaaaatggggattgctggtcccagaggtcctgcaggcccacctggactggatggt
gcaaagggtgttaaaggagaccgtggtgcaactggagatgtgggagaaaaaggagagcag
ggtcatcctggaatgccaggctttgcaggacttcctggaaatcctggtccacctggacca
gatggggctcctggatcaattggaccagcaggaaatccaggagatataggtaaagatggc
cctccaggtccacagggaccaccaggtgtgcctggacttccaggcattgctggaaatgac
ggcaaagatggcaagccgggatctcttggggaaccgggaaagcctggagaaccaggactt
cctggccaggagggtgccagaggtttaccgggtttcaaaggacaaagaggagatacaggt
cccccaggtccccagggggaaccaggtgcgacaggtcctgctgggcgtgaagggccacca
gggaaagatggtgatactggtcctgtaggaccacagggtcctcgaggactcagagggccg
ccgggcaagaatggattgcctggccctgtgggagagcctggccctgctggtaacccaggt
ccaaaaggaaataaaggagaaaatggcagcccaggactccctggttttgtaggaccccga
ggaccacctggagaaccaggagagaagggtcctccaggaaaagagggcgtaccagggaaa
ccaggcgaaactggctccagaggagagaggggacagcctggcattaagggtgaaaaaggc
tctccaggagaaaagggccctccaggtgatccaggaatacctggtcacaaaggccatccg
ggactgatgggtcctcatggacctccaggagacaatggacaagtgggacctccaggtccc
ccaggacagccaggatttcctggaccccggggggaaccgccatctctggagactttgagg
aggctaatccaagaggagttagcaaagcagctagatgcaaagttagcctatctcttggct
gaaatgcagcctgcacatgtaaaagcatcccatggtagaccaggacctccaggtcctcct
ggaaaggaaggactcccaggaagagctggtcctccaggagagcctggccgacctggacag
actgggtctgaagggccacctggaccgattggtcccaaaggagaaagaggagcgaagggt
gagaagggagatactggtgttggtcaacgaggtgaaataggtcctccgggaattccaggc
ctcccaggggagcctggctatgccaaagatgggatgccaggacyacctggccctcaaggc
gaagctgggttgcctggtctcatgggcccacagggacctccaggagccaatggacagtgt
gacccttctcagtgtgcctactatgcaagtcttgctgccaggcctggcaatgtcaaaggg
ccctag
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integrated database retrieval system
