Nothoprocta perdicaria (Chilean tinamou): 112954537
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Entry
112954537 CDS
T07556
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd04142
Lysosome biogenesis
npd04144
Endocytosis
npd05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112954537 (CLTC)
04142 Lysosome biogenesis
112954537 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
112954537 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npd04131
]
112954537 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npd04147
]
112954537 (CLTC)
Membrane trafficking [BR:
npd04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
112954537 (CLTC)
Exosome [BR:
npd04147
]
Exosomal proteins
Proteins found in most exosomes
112954537 (CLTC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
NEW1_HB
Ig_TRAPPC10_3rd
Motif
Other DBs
NCBI-GeneID:
112954537
NCBI-ProteinID:
XP_025903511
Ensembl:
ENSNPEG00000010642
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFT
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
NKKECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFSYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcccatccgcttccaggagcatctccagctccaaaatctgggcatc
aacccagcaaacattggcttcagcaccctgactatggaatctgacaaattcatctgcatc
agagagaaagtaggagaacaggctcaagtggtgatcattgacatgaatgaccccagcaac
cctattcgaagaccaatttcggctgacagcgctatcatgaatcctgctagtaaagtcatt
gcattaaaagctggaaaaacgcttcaaatatttaacattgaaatgaagagcaaaatgaag
gctcatacaatgacagacgatgtcaccttctggaagtggatttctctgaataccgtcgct
cttgtgacggataacgccgtctatcactggagcatggagggggagtcccagcctgtgaaa
atgtttgatcgtcactctagtcttgctggctgccagatcatcaactaccgcactgatgcc
aagcagaaatggctgctgctaaccggcatatccgcccagcaaaaccgtgttgtgggagca
atgcagctctattctgtagatagaaaagtgtcacagccaattgaagggcacgcagctagc
ttcgcacagttcaagatggaaggaaatgctgargaatccacactcttctgttttgcagta
agagggcaagctgggggtaagttgcatatcattgaagttggcacaccaccaacagggaat
cagccatttccaaagaaagcagtggatgtcttctttcctcctgaggcacaaaatgacttt
cctgttgcgatgcagatcagtgacaagcatgatgtggtgttcctgataacaaaatatggc
tatatccacttgtatgacctggaaactggcacctgtatctacatgaacagaatcagtgga
gagaccatatttgttactgcacagcatgaagcaacagctgggattataggggtcaacaga
aagggacaagtgctgtcggtgtgtgtggaagaagagaatatcattccctacatcacgaac
gtgttgcagaatcctgacctagccctgcgaatggctgtccgcaacaacctggcaggagct
gaggagctttttgcccgraaattcaatgcactgtttgcgcaagggaactactcagaggca
gcaaaagtggcagctaatgcccccaagggaatcctgcgtactccagacaccatacgccgg
ttccagagtgttccagctcagccaggacagacttcccctttactgcagtattttggcatt
ctgcttgatcaagggcagctgaataagtatgagtctctggaactctgcagaccagtgctt
cagcagggacgcaarcagctcttggaaaaatggttaaaagaagataagctggagtgctcg
gaggagctgggagaccttgtgaagtctgttgatcccacactagcacttagtgtctatcta
agagccaacgttcccaacaaagttatccagtgttttgctgaaacaggacaagtccagaag
attgttttgtacgcaaagaaggttggatatactccagactggattttcttgctgagaaay
gtaatgagaatcagccctgatcaaggacagcagtttgcacaaatgcttgtccaggatgaa
gagccccttgcagacataacacaaattgtggatgtctttatggaatataatctgattcag
caatgtacagccttcttgctggatgcactgaagaataatcgtccctcagaaggtccccta
cagacacgtttacttgagatgaacctcatgcatgcacctcaggtcgcagatgctatcttg
ggaaaccaaatgtttactcattatgaccgggctcacatagctcagctgtgtgagaaagct
ggtttgctgcagagagcactagaacacttcacagacttgtatgacattaaacgtgcggta
gttcacactcatcttctcaatcccgagtggttggtgaattattttggctccttatcagta
gaagactctctggagtgtctgcgtgctatgttgtctgcyaacatccgtcagaacctgcag
atctgtgtccaggtagcttcaaaataccacgaacagttatcaacgcagtcccttatagag
ttgtttgagtctttcaagagctttgaaggtttgttttatttcctgggctctattgtaaac
ttcagccaggatccagatgtgcacttcaaatatattcaagctgcatgcaagactggacaa
attaaagaagtagaaagaatctgtcgggagagcaactgctatgatccagaacgtgttaaa
aacttcctcaaggaagcaaaacttactgaccagttaccactcatcattgtgtgtgatcgc
tttgactttgtgcatgacttggtgctgtacttgtacagaaacaatctccaaaaatacatt
gagatttatgtacagaaggtcaatccaagccgtctgcctgttgttattggtggattgctt
gatgtggattgctccgaagatgtgataaagaatcttatccttgtagtgagaggtcagttt
tcgactgatgaacttgttgcagaggtggagaagagaaacaggctgaaactccttctgccc
tggctggaggcaagaattcatgagggttgtgaggagcctgcaactcacaatgcactggcc
aaaatatacattgacagcaacaacaacccagaaagattcctgcgtgagaatccttattat
gacagccgggttgttggcaagtactgtgagaagagagaccctcacctggcctgtgtggct
tacgagcgtggacagtgtgacttggaacttattaatgtatgcaatgagaattctctcttc
aaaagcctctcccgctacttagttcgtcgtaaagaccctgagctgtgggcaagtgtcctc
ctggaaagcaacccttacagaagaccactaattgatcaggttgtacagactgccctgtca
gagacacaggaccctgaggaagtctctgttactgtgaaagccttcatgactgccgacctt
cccaatgagctcattgagttgctggagaaaattgttctcgacaactctgtgtttagtgaa
cacagaaatctgcagaacctgctcattcttacagctattaaggctgatcgtacccgtgtc
atggagtatatcaatcgcttggataactatgatgctccagacatagcaaatatagctatc
agtaatgagctctttgaggaggcatttgctatcttcagaaagtttgatgtcaacacatca
gctgtacaggtattaatagagcacatcggaaacttggatcgtgcatatgaatttgctgaa
cgctgcaatgagcctgctgtgtggagtcagcttgctaaagcacagcttcagaaagggatg
gtaaaggaagcaattgactcctatattaaagcagatgatccttcctcatacatggaagtt
gttcaagctgccaatgccagtggaaactgggaagaactggtgaagtatctgcagatggcc
cgcaagaaggcccgggagtcgtatgtggaaacagaattaatcttcgctcttgctaaaacg
aaccgtttagcagagctagaggagttcatcaatggacccaacaatgcacatatccaacaa
gttggcgatcgctgttatgatgaaaagatgtatgaagcagctaaacttttgtataacaat
gtgtccaactttggccgattagcctcaactttagttcacttgggtgaataccaggcagct
gtggatggtgctcggaaagcaaacagtacccgaacatggaaagaggtctgctttgcttgt
gtggatggaaaagagttccgcctggcccagatgtgtggacttcatattgtagtgcatgca
gatgaattggaagagctaatcaattactaccaggaccgtggatactttgaggagctcata
actatgttggaagcggcacttgggcttgagcgagcgcatatgggaatgtttacagagcta
gcaattctctactccaaattcaagccacagaagatgagggagcatttggaactcttctgg
tctagagtcaacataccaaaggttctgagagctgcagagcaagcccatctctgggctgaa
ctggtgttcttgtatgataagtatgaagaatacgataatgctataatcacaatgatgaat
cacccaacagatgcctggaaagaaggacagttcaaagatatcatcactaaggtggccaat
gtggaactgtattacaaggcggttcaattctatttggaatttaagcctctgttgctcaat
gatctgctgatggtgttgtcccctcggcttgaccacactcgtgctgtcaccttcttcaca
aaggttaaacagctaccactggttaagccgtacctgcgctcagttcagaatcacaacaat
aaatcagtgaatgagtccctgaacaacctcttcattattgaagaagactaccaggctctt
aggacttctatagatgcttatgacaactttgacaacatttcccttgcccaacgtttggag
aaacacgaactgatagaattccgaagaattgctgcctatctcttcaaaggaaacaaccgc
tggaaacagagcgtagaactctgcaagaaggacagactgtataaggatgcaatgcagtat
gcttcagagtccaaagataccgagttggcagaggagttgctgcagtggttcttgcaggag
aacaagaaagaatgctttggtgcttgtctcttcacctgctatgacctcctaaggccagat
gttgttttggaaacggcgtggaggcacaacatcatggactttgccatgccctactttatt
caggtcatgaaggaatacttgaccaaggttgatgcaataaaggaaaaggtggataaactg
gatgcatcagagtccttgagaaaggaagaggagcaagctacagaaacacaacctattgtt
tatggtcagccacagctaatgttgacagcaggacccagtgttgcagttcctcctcaagca
cctttcagctatggctacactgcaccgccatatgggcaacctcagcctggctttgggtac
agcatgtaa
DBGET
integrated database retrieval system
