Nothoprocta perdicaria (Chilean tinamou): 112954822
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Entry
112954822 CDS
T07556
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112954822 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npd03400
]
112954822 (MSH2)
DNA repair and recombination proteins [BR:
npd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
112954822 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_27
MutS_I
Motif
Other DBs
NCBI-GeneID:
112954822
NCBI-ProteinID:
XP_025903864
Ensembl:
ENSNPEG00000002397
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MNFESFVRDLLLVRHYRVEVYKNKAGSKSTKENDWYLAYKGSPGNLAQFEEVLFANNDMS
TAIGVVGVKLSTTDGQRVVGVGYVDTTLRKLSVCEFPDNDQFSNLEALLVQLGPKECVLP
GGETAGEMGKLRQVIQRGGILITDRKKAEFTTKDIVQDLNRLLKSKKEEQMNSAALPEME
KQVAISSLSAIIKFLELLSDESNFGQFELTTFDLSQYMVLDNAAVQALNLFQSSLENANT
AQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVVDPELRQCLQEDLLR
RFPDLNRLAKKFQRQAATLQDCYRMYQAINQLPNVVQALEKHEGDHQMLLLAVFITPLND
IHSDFSKFLEMIETTLDMDKVENHEFLVKASFDPNLTELREKMNELEENMESFLKSAAKE
LGLEAGKSIKLESNSQFGHHFRITCKEEKVLRNNSKYRIIDTQKNGVKFTNSKLSSINEE
YIKNREEYEEAQDAIVKEIINIASGYAEPIQTMNDVIAQLDAIVSFAHVSNGAPVPFVRP
VILEKGQGRIVLKGSRHPCIEVQDDVAFIPNDVTFEKDKQMFHIITGPNMGGKSTYIRQT
GVIVLMAQIGCFVPCDSAEITIVDCILARVGAGDSQLKGVSTFMAEMLETASILRTASEN
SLIIIDELGRGTSTYDGFGLAWAISEYIATRICAFCMFATHFHELTALADQVSTVNNLHV
TALTSDNTLTMLYRVKEGVCDQSFGIHVAELAAFPKHVIESAREKALELEEFQNIGKSKE
CEGEPPLKKPYREREEGEKIIQDFLCQVKALPLADMSEEDIKTKLKQLRNEVLAKNNSFV
NEIISRTKVTT
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaatcttttgtgagggatctgcttctggttcgtcattacagagttgaagtc
tacaagaacaaagcagggagcaaatctaccaaagaaaacgactggtatctggcatacaag
ggctctccaggaaatcttgcccagtttgaggaagttctttttgccaacaatgatatgtcc
acggccattggagttgtgggtgtgaagctctctactactgatggacaaagagtagttgga
gtggggtatgtggatactacactgagaaaactgagcgtctgtgagtttccagataacgat
cagttctcaaacctcgaagctctgctggttcaattaggacctaaggagtgtgtgctccca
ggaggagagactgctggagagatgggaaagctgcgacaagtcattcagagaggaggaatt
ctgattacagacagaaagaaggcagagttcacaacaaaagatattgttcaggatctgaat
cgcttattaaaatcaaagaaagaagaacaaatgaacagtgcagcrttgccggagatggaa
aaacaggtggccatttcatctttgtcagccattatcaagtttttagagttgctgtcagat
gagtctaattttggacaatttgaactgactacttttgatcttagtcaatatatggttctt
gataatgcagctgtccaggccctcaaccttttccagagttctttggagaatgctaatact
gcacagtcactagctggcttactaaataaatgcagaactcctcaaggacaaaggctagtt
aatcagtggatcaaacagccacttatggacaagaatagaattgaagaaaggttgaatttg
gttgaagcctttgtggtggatccagaactgcgtcagtgccttcaagaagatcttttacgt
cgcttcccagatctcaaccggctagcaaagaaatttcagagacaagcagcaaccttacag
gactgttaccgaatgtatcaggcaattaatcaactccctaacgttgtacaagcactagaa
aaacatgaaggagatcaccagatgttgttgttggcagtgtttataacaccacttaatgat
atccactctgacttctcaaagtttctggagatgatagaaacaacattagacatggataag
gtggagaatcatgaatttcttgtcaaggcttcttttgatcctaacttgacagaattgcga
gagaagatgaatgagctggaggagaacatggagtcctttttaaagagtgcagccaaagaa
ctaggtttggaagctggcaaaagtatcaaactggagtcaaattcacagtttgggcaccat
tttcgaattacttgcaaggaagaaaaagttctccggaacaactccaagtacaggataatt
gatacccagaagaatggcgtgaagtttaccaacagcaaactgagctccatcaatgaagaa
tatataaagaacagagaagagtatgaagaggctcaggatgcaatcgttaaggaaatcatt
aacattgcttcaggttatgcagagccaatacagaccatgaatgatgtgatagctcagttg
gatgcaattgtcagttttgctcatgtgtcaaatggagctccggtgccgttcgtccgtcct
gtyatcctggagaaaggacaaggaagaattgtgctgaagggctccaggcatccttgcatc
gaagtgcaagatgatgtagccttcatccccaatgacgttacgtttgagaaggacaagcag
atgttccacattattactggccctaacatgggaggaaagtcaacgtacatccgacagact
ggggtgatagttctcatggcccaaattgggtgttttgtgccgtgcgactctgcagaaata
accattgtggactgtattctggctcgggtaggagctggagacagtcagctgaaaggtgta
tctactttcatggccgaaatgttggagactgcatcaatccttaggacagcatctgaaaac
tccctgataatcattgatgagctgggaagaggaacttctacctatgatggctttggcttg
gcatgggctatttcagagtacattgctaccagaatttgtgctttctgtatgtttgccaca
cattttcatgaactgacagcgcttgctgaccaagtgtccacagtcaataatttacacgtc
accgcgctgactagtgacaacacactgacgatgctctatcgtgtcaaggaaggtgtttgt
gaccagagttttggaatacatgtagcagagttggcagcttttccaaaacatgtaattgag
agtgcaagagagaaggcattggagctggaggagtttcaaaacattggcaaatccaaggaa
tgtgaaggagaaccaccactcaagaaaccttacagagaaagagaggaaggtgaaaaaata
attcaggattttctttgtcaagtgaaagcattgccgctggcggatatgtcagaagaagat
atcaaaaccaagctgaagcagctgaggaatgaagtgttggcaaagaacaacagttttgtg
aatgaaataatttcccgaacgaaagttacaacatga
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