Nothoprocta perdicaria (Chilean tinamou): 112954831
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Entry
112954831 CDS
T07556
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112954831 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npd03400
]
112954831 (MSH6)
DNA repair and recombination proteins [BR:
npd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
112954831 (MSH6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
Plasmid_RAQPRD
Motif
Other DBs
NCBI-GeneID:
112954831
NCBI-ProteinID:
XP_025903878
LinkDB
All DBs
Position
Unknown
AA seq
1154 aa
AA seq
DB search
MEVSEGASGDSEGCNSEEDVKSSKRGANSGRGAVKAKRRRVLDSDSDPDDSDAEFKPDVK
EAASSEEVSSGEDENESTDTEMDAESIAESPVKVPSKRKRRDTSKPAKRSSLGNGPLETX
KNTAVVSSEAKSKLTSFAAPDNFESQANACSGGNGGFSVWEHEKLDWLQEGKRKDARRRR
QDDPDYDPCSLYVPEDYLNKCTPGMRRWWQLKSQNFDAVIFYKVGKFYELYHMDAVTGVN
ELGLIFMKGAWAHSGFPETAFGRFSDVLVQKGYKVARVEQTETPEMMEARCKSMSHPTKF
DRVVRREICRIITKGTQTYSVLDCDPSENHSKYLLSIKEKEDSSGRRVYGACFVDTSVGK
FYVGQFSDDRHCSRFRTLVAHYTPVQVLFEKGNLSLDTQKILKGSLVSCIQEGLMPGSQF
WNASKTLKVLLEEEYFKEKQNSDNGCSLPSVIKSMTSESDSLGLTPGENSELALSALGGC
IFYLKKCLIDQELLSLGBFEEYVPVDMDIAKTAXSTSVFAKTDQRMVLDGVTLVNLEVLQ
NGTNGTTEGTLLERIDSCCTPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKMSE
VSEHLKKLPDLERLLSKIHSIGSPLKSQNHPDSRAIFYEEVKYSKKKIADFLSALEGFKV
MNEIVDTMEETARDFKSKVLKQLVTRKAKNPEGRFPDLNAELKRWDTAFDHNQARKTGVI
TPKSGFDPDYDKALQDIKAVEEDLNEYLNKQRKLLGLKSVLYWGAGKNRFQMEIPESAVS
RSLPEEYELKSTRKGYKRYWTKEIERMLAALVNAEERRDAALKDCMRRLFYNFDKNSQAW
QSAVECIAVLDVLMSLANYSQDGDGPLCRPVILLPVDSSPPFLELKSSRHPCITKTFFGD
DFIPNDIVIGCKDEHSSSGASCVLVTGPNMGGKSTLMRQAGLLAIMAQLGCYVPAEGCRL
TPIDRVFTRLGASDRIMSGESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAI
ASAVVKELAEKIRCRTLFSTHYHSLVEDYSHSAAVRLGHMACMVENESEEDPSQETITFL
YKFIEGVCPKSYGFNAARLANIPEEVVQKGHRKAKEFEKTTLSLRTFRYLCLVVDDATSD
TKALQKLTTLLSHL
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgagtgaaggcgcttcaggcgacagcgagggctgcaacagcgaggaggacgtg
aagagcagtaagcggggggcgaatagcgggagaggygccgtcaaagccaaaaggagaagg
gtgctggattctgacagcgatcccgatgattctgacgctgagttcaagcctgatgtgaaa
gaagcagcaagcagtgaagaagtcagtagcggggaggatgaaaatgaatctactgacaca
gagatggacgcagagagcattgcagaaagtcctgttaaagtcccttctaagcggaagaga
agagacacaagcaagcctgccaagaggagcagcttgggaaatggccctttggaaacacsc
aaaaacacagcagtggtttcttcagaagctaagtccaagctgacttcttttgcagcacct
gacaactttgaatctcaagcgaacgcttgcagtggcggaaacggcggcttttcagtatgg
gagcatgaaaagctggactggctgcaggaagggaaaaggaaggatgcgcgcaggaggcgg
caggacgatcccgattacgacccttgcagcctgtatgtgcccgaggactatcttaacaag
tgtacgccgggaatgcgcaggtggtggcagctgaaragtcagaactttgacgcggtgatt
ttctacaaggttggaaaattctatgagttgtatcatatggatgcagtcacgggtgtaaat
gagttgggcctgatattcatgaagggcgcttgggcccactctggcttcccagaaactgca
tttggcaggttttcggatgttctagtgcagaagggctacaaggtggcccgtgtggagcaa
acggagacccccgagatgatggaagcgcgctgtaagtccatgtctcacccgacaaaatty
gacagggttgtacgcagggagatctgtcgaatcattaccaaagggactcagacctacagt
gttctggactgtgatccgtctgagaaccacagcaaatacctcctgagcatcaaggagaag
gaagactcctctggacgtcgtgtctacggggcttgttttgttgacacctcggtagggaag
ttttacgtgggtcagttctccgacgaccggcactgctcgaggttccggaccctggtcgct
cactacactcccgtgcaggtgctctttgagaagggcaacctttccctggacacacagaag
atcctgaaaggctcgctcgtctcttgcattcaggaagggctgatgcctgggtcgcagttc
tggaatgcatctaaaacactaaaagttctccttgaagaagaatatttcaaggagaaacag
aactctgataacggatgttctctgccctccgtaatcaaatctatgacttcagagagcgat
tcgttggggttaactcctggtgaaaatagtgaactagccctgtcagctcttggtgggtgt
atcttctatctcaaaaaatgtttaattgatcaggagctgttatcgttggggracttcgag
gagtatgtcccggtggatatggatatcgcaaaaactgcargctccactagtgtctttgcc
aaaactgaccagcggatggtgctggacggagtcaccctggtgaacttggaagtgctgcag
aacggaactaatggaaccacagaagggacgttgctggaaaggattgactcttgctgcacg
ccgtttggaaagcggctcctgaagcagtggctctgcgctcccctctgcaaccctaaatcc
atcaatgatcgtttggatgctgttgaggacctcctggcggtgcctgataaaatgtctgaa
gtcagtgagcacctgaagaaacttcccgaccttgaaaggctcctcagcaaaattcacagc
attggatcaccgctgaagagtcagaaccatcctgacagcagggccatcttttatgaagaa
gtcaagtatagcaaaaaaaaaattgccgatttcctttctgccctggaagggtttaaagtg
atgaatgaaattgtagataccatggaagaaactgccagggacttcaaatctaaagtactt
aagcagcttgtcacccgcaaagccaaaaatccggagggccgatttcctgatttaaacgca
gaactcaaaaggtgggatactgcttttgatcataaccaggctcggaagacgggggtgatt
acyccaaagtcgggctttgaccctgattacgataaagcactacaggatattaaggccgta
gaggaagatcttaacgagtacctaaacaagcagcgcaagctcctcggattgaaatccgtg
ctgtactggggggccggcaagaaccgcttccaaatggaaatccccgaaagcgccgtctcg
cggagcctgcccgaggagtacgagctgaagtccacgcggaagggctacaagcgctactgg
accaaggagatcgagaggatgctggcggcgctggtcaacgccgaggagcggcgggacgcg
gcgctcaaggactgcatgcggcgcctcttctacaacttcgataagaacagccaagcctgg
cagagcgcggtcgagtgcatcgccgtgctggatgtcttgatgtcccttgcaaactatagt
caagacggtgayggacccctgtgccgacctgtaattctgctgcctgtggacagttctcct
cccttcctggaactgaagagttcgcgccatccktgtattacaaagactttttttggagat
gactttattcctaatgacattgtgataggctgcaaagatgaacacagcagcagtggcgct
tcctgcgtgctagtgaccggcccaaacatgggtggcaaatctacactcatgagacaggct
ggtctcttggccatcatggcccagctggggtgttacgtacctgccgagggctgcagactt
acacctatcgacagagtattcacaaggctgggtgcctccgacaggattatgtcaggggaa
agtaccttctttgttgagctgagtgagacttccagcatactccagcatgcaacagagcat
tcccttgttcttgtggatgaactaggtcgaggcacagctacttttgatgggacagccata
gcgagtgcggttgttaaagagctcgccgagaaaatcaggtgtcggactctgttctccacc
cactaccactcgctggtagaggactattcgcacagcgctgccgtgcgccttggacacatg
gcatgtatggttgagaatgagagtgaagaagatccaagccaggaaaccattacattcctg
tacaagttcattgaaggagtgtgtcccaaaagctatggcttcaatgcagcaaggcttgct
aatattccagaggaggttgttcagaaggggcacagaaaagcaaaagagtttgaaaaaaca
acactttcgctgcgaacatttaggtatctctgcttggtggtggatgatgcaacaagtgat
acaaaggctcttcagaaacttaccactctgctcagtcacctctag
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