Nothoprocta perdicaria (Chilean tinamou): 112955380
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Entry
112955380 CDS
T07556
Symbol
SH3RF1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
npd01009
]
112955380 (SH3RF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npd04121
]
112955380 (SH3RF1)
Enzymes [BR:
npd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112955380 (SH3RF1)
Protein phosphatases and associated proteins [BR:
npd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112955380 (SH3RF1)
Ubiquitin system [BR:
npd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112955380 (SH3RF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-C3HC4_4
zf-RING_11
Prok-RING_4
Coilin_N
zf-Nse
zf-MIZ
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
112955380
NCBI-ProteinID:
XP_025904454
Ensembl:
ENSNPEG00000002684
LinkDB
All DBs
Position
Unknown
AA seq
876 aa
AA seq
DB search
MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVSSRNELRCPECRTLVDCAV
DELPSNILLVRLLDGIKQRPRKPGAGGGTGSTTALRVPVNTAANCGSKELQSAQAGQQQR
VQARSPPVRGVPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGVHGF
FPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFSKDDVLTVIRRVDENWAEGML
ADKIGIFPISYVEFNTAAKQLIELDKPSGSAVDSGEGTSGATHNNSTQKHTDTKKNTKKR
HSFTSLTMSNKSSQSSQNRHSMEISPPVLISSSNPTAAARISELTGLSCSAPSQVHIGTT
GLIVTPPPSSPVTTGPSFTFPSEVTYQAALGNMNPPLPPPPPLLSAAIVASAGSGPPSAG
VAPRPAAGPADPIAHLRPQSRPSVYIAIYPYTPRKDDELELRKGEMFLVFERCQDGWFKG
TSMHTSRIGVFPGNYVAPVTRTVTSASQTKVPMSTAAQAGRVVTMVSPSTASGTSQKLQG
NGVAVNSSTVPTAVVSAAHIQTSPQTKVLVHMTGQMTVNQARNAVRTVAAHSQERPTAAV
TPIQAQSSTCLIPAAVIIPHHSAASQQLQPPHSSTAAYVTAVNVSRSAVPLACAAAAASL
GSPSVSPPAVEGDGGGRAVNAHPGAPASPDNTSGAGGNAAVAKPDKDSKKEKKGLLKLLS
GASTKRKPRLSPPASPTLESEQAAAELALQGAVGPELPSAGGHSKAGPCPNESEVSALAQ
ETLHRKTSSLDSSIPIAPPPRQPCSSLGPVLNESRPVVCERYRVVVSYPPQSEAELELKE
GDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVENI
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatcagctctgctggacctgctggagtgtcccgtttgcctagaacgcctcgat
gcttctgccaaggtcctgccttgccagcacacgttttgtaagcgctgcctgctgggcatc
gtgagctcccgcaatgagcttcggtgcccggagtgcaggactttggtggactgcgctgtt
gatgagctgcccagtaatattttgcttgtcagactactggatggcatcaaacagaggcct
cggaaacctggcgctggtggtgggactggtagcacaactgcgttgagggtcccggtcaac
actgctgcaaactgcggatcgaaggagctgcagagcgctcaagctggacagcagcaaaga
gtgcaagcacggagccctcctgttaggggagtacctcagttaccatgtgccaaagcattg
tataactacgagggaaaagaacctggagatcttaaattcagtaaaggagatatcatcatt
ttacgccggcaggtggatgagaattggtatcatggagaagtcaatggcgttcacggcttt
tttcctaccaactttgttcagattattaaacctttacctcaacctccgcctcagtgcaaa
gcactttatgactttgaagtaaaagacaaggaagcagataaagactgtttaccattttca
aaggacgatgttctgactgtaattcgccgagtggatgaaaactgggcagaaggaatgctg
gctgacaagatagggatatttcccatctcatacgttgagtttaacacagcagccaagcag
ctgatagaattggataagccatcaggctctgctgtagactctggagaaggtacctctggg
gcaacccataacaattcaacccaaaagcacaccgataccaagaagaacaccaaaaaacgg
cactcttttacctccctcactatgtccaacaagtcttcgcagtcttctcagaatcgccat
tcaatggaaatcagtcctcctgttctcattagctccagcaacccaacggcggccgcccgc
ataagtgagctgacaggcctttcctgtagtgccccttctcaggttcatattggtaccaca
ggactgattgtgactccacctcctagcagcccagttacaacagggccttcatttaccttc
ccatcagaagttacctaccaagcagctcttggtaatatgaatccccctcttccaccacca
ccacctctcctgtcagctgccatcgttgcatcagccggttctggccctccctctgcaggg
gtagcaccaaggcctgcagcaggaccagctgacccaattgcacatttacgaccacaaagt
cgaccgagtgtatacattgctatatatccatacactcctcggaaagatgatgaactggaa
ctgcgraagggagaaatgttcttagtgtttgaacgctgtcaagatggttggttcaaagga
acttctatgcatacaagcaggattggtgtttttcctggcaattacgtggccccagttaca
aggacagtgacaagtgcgtcccaaacaaaagttcccatgtctactgctgcccaagcagga
cgagtggtaacgatggtcagcccttccacagctagtgggacatcgcagaagctccaggga
aatggtgtggcagtgaactcaagcacagtgcccacggctgtggtttctgcagcacatatc
caaaccagtccgcaaactaaggtccttgtgcacatgacaggacaaatgacggtcaaccag
gctcgcaatgcggttagaacagttgctgcgcacagtcaggaaagacccacggcagcggtg
acgcccatacaggcacagagctcaacgtgccttattcctgctgccgtgatcatcccgcac
cactcggctgcttcccagcagctccagcctccgcactcgagcacggcggcctacgtcact
gctgtgaacgtgagccgctcggccgtgccgctggcgtgtgcagcagcagcagcttccttg
ggctcccccagcgttagccctcccgctgtggagggagacggcggtgggagagctgtgaac
gctcaccctggagcccctgcgtccccggataacacgtcaggagccggtggaaatgctgcc
gtcgctaaaccggacaaggatagcaagaaagaaaagaagggtttgctgaaactgctttcg
ggggcgtccactaagcgcaagccccggttgtcccctccagcttcaccaaccctggagtct
gagcaagcagcagcagagctggccctgcaaggtgcagtggggccggagcttccttcagca
ggagggcacagcaaagctgggccctgtcccaatgagagtgaagtctctgcactggcacag
gagacrctgcatcggaaaaccagttccctggattccagtattccgatagcgcctcctcct
cggcagccgtgctcatccctgggtccagtcctgaatgaatccaggcctgttgtctgtgaa
agatacagggtcgtggtatcctatcctccacagagtgaagcagaacttgaacttaaggaa
ggtgacattgtgttcgtacacaaaaaacgtgaggatggctggttcaaaggcacgctgcaa
cgaaatggaaaaactggccttttccccggcagctttgtagaaaacatttga
DBGET
integrated database retrieval system
