Nothoprocta perdicaria (Chilean tinamou): 112955613
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Entry
112955613 CDS
T07556
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8-like
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112955613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npd03036
]
112955613
Chromosome and associated proteins [BR:
npd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112955613
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
PH_SPT16
SPT16
Peptidase_M24
Rttp106-like_middle
Helicase_C
Chromo
SPT16_C
ResIII
FACT-Spt16_Nlob
DEAD
HDA2-3
HTH_Hrp3
MUN
DUF1949
Motif
Other DBs
NCBI-GeneID:
112955613
NCBI-ProteinID:
XP_025904722
LinkDB
All DBs
Position
Unknown
AA seq
2663 aa
AA seq
DB search
MVNGDGEASPVVSETSRSGGTSLVVNGNGGAFPIVSEVNGDGGTSPTVSGDGGTFPMVNG
DGEASVMTLRVDGAGGTSLVVNGDRGTSPVVSGDGGASPVVNGNKGTSPVVNGDRGTSPV
VGGDGGTPRAASPQGESKRITLVLQQPPGAAAAAATSGQRHVVLGSLPGKIVLQGNQVAA
LGQAKGAAGQAAKVVTIQLQVQPAANAQKIQVLQQAPGAGPAVAVPPAQVVAGAAQRLTV
PLKVVLQPQGIVVVVGRHGGGGTWWREWDIVVVKCGGGGGDHGGGGRSTITPVVGKKRKR
NASSDNSDAEAMPAPAPREEEESSVQKRRSNRQVKRKKYTEDLDIKITDDEEDEELDVTG
PVRTEQPPAPQLPVPEPEPEGETLPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPSGQF
TESEEFFVKYKNYSYLHCEWATIDQLEKDKRIHQKLKRFKTKMTQMRHFFHEDEEPFNPD
YVEVDRILDESHSVDKDNGEPVVYYLVKWCSLPYEDSTWELKEDVDEGKIGEFKRIQARH
PELKRVARPQAGSWTKLELSREYKNHNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGK
TIQSIAFLQEVYGVGVRGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQY
EMYCKDARGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVVIDEAHRLKNRNCKLLD
SLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSEAEFLKDFGDLKTEEQVQKLQ
AILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMP
NLLNTMMELRKCCNHPYLINGAEEKIVAEFRESWPALPPPDLHLQAMVRSAGKLVLIDKL
LPKLKAGGHKVLVFSQMVRCLDILEDYLIQKRYLYERLDGRVRGNLRQAAIDRFSRPDSD
RFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRN
SYEREMFDKASLKLGLDKAVLQSMSGREGSIAGIQQFSKKEIEDLLRKGAYAAIMEEDDE
GSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDIALDDPNFWQKWAKKA
DLDLELLNSKNTLVIDTPRVRKQTRHFSTLRDDDLVEFSDLESEDEERPRARRHPQPHAP
PHAYGRTDCFRVEKHLLVYGWGRWREMAARGRFKRRLAERDVETICRAILAYCLLHYRGD
EALKAFIWDLIGPAENGRAKELPNHSLSAPVPRGRKGKKGKAPGGAEAPKAEWLRRCDPA
ALFQDEGYKKHLKHQCNKVLLRVRMLYYLRQELIGEQAEKVLAGAAASDVDIWFPLVEQQ
EVPAAWWDAEADKSLLLGVFKHGYERYNTMRADPALCFLAKAGRPDEQAVAAEQHLDAAD
GLDFDKDDDVNGGADDDVNDDVNGDADDDVNGDADDDASDDANGGANDDTNDDANDDVHG
DTNSDTNVDTHDDPHGDPSNDTNGDPNDDPHDDPHGDPHGDPHGSESGSCDDDSDEERGP
GVPGAPKLSEEDEDEEDEEDEESPPSPPTSREGDSPEQPPEPPPERPPPPDWPKERALAR
RLELVCQAVLSGEWPEGPRGAEPGAFTRLRPGPGDKGFSVRIKDEEGLKLTFQKQRPAPN
GALRERGPPPGAKRAAKKPPEAAGLRAPFAPPEPSERHKQHKWPRGGAHEPAGLPARRAD
IPGDKALRASGRGRRIGVFSKDKFPGDFMRSWNECLAREGFEKVDISAVVAATMAVKEDG
ELQLMRKAATITSELFNKFFKERVMEIVDADEKVRHSKLAEAVEKAIEEKKFLAGAEPSA
VEMCYPPIIQSGGHYSLKFSVVSDKNHMHFGAITCAMGIRYKSYCSNLVRTLMVDPPQDM
QDNYCFLLQLQDELLKELRHGARLCDVYAAVMDLVKRQKPELLGKITKNLGFAMGIEFRE
GSLVINSKNQQRLKKGMVFSVNIGFSELPNKEGKKPEERTYAMFVGDTVLVDEDAPATVL
TTVKKKVKNVGIFLKNEDEEEEEEEKDEAEDLLGRSSRAALLTERTRNELTAEEKRRAHQ
KELAMQLNEEARRRLTEQKGEQQIQKARKSNISYKNPALMPKEPHIREMKIYIDKKYETV
IMPVFGIATPFHIATIKNISMSVEGDYTYLRINFYCPGSALGRNEGNIFPNPEATFVKEI
TYRASNMKTPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRS
NPKLKDLYIRPNIAQKRMQGSLEAHVNGFRFTSVRGDKVDILYNNIKHAVFQPCDGEMII
VLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHMHDRDDLYAEQMEREMRHKLKT
AFKNFIEKVEALTKEELEFEVPFRELGFNGAPYRSTCLLQPTSSALVNCTEWPPFVVTLD
EVELVHFERVQFHLKNFDLVVVYKDYGRKVTMINAIPVASLDPIKEWLNSCDLKYTEGVQ
SLNWTKIMKTIVDDPEGFFEQGGWSFLEPEGEGSDVDAGESESEMEDETFNPSEEDYEEE
EEDSDEDYSSEAEESEYSKESLGSEEESGKDWDELEEEARKADRESQYEEEEEHSRSRKR
KAPAARGARGPARAPGPPRKKRK
NT seq
7992 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatggggatggagaagcatctcccgtagtttcagagaccagtaggagtggagga
acatctctagttgtcaatgggaatggaggagcatttcccatagtttcagaggtcaatggg
gatggtggaacatctccaacagtcagtggggatggaggaacatttcccatggttaatggg
gatggagaagcatctgtaatgaccttgagggtcgatggggctggaggaacatctctggtg
gtcaatggggacagaggaacatctccagtggtcagtggggatggtggagcatctccagtg
gtcaatgggaacaaaggaacatctccggtggtcaatggggacagaggaacatctccagtg
gttggtggggatggtggaacacctcgcgccgcctccccgcagggcgagtccaagcgcatc
accctggtgctgcagcagccgccgggcgctgccgccgccgccgccacctcgggccagcgc
cacgtggtcctgggcagcctccccggcaagatcgtcctgcagggcaaccaggtggccgcg
ctgggccaggccaagggcgccgcgggccaggcggccaaggtggtcaccatccagctgcag
gtgcagccggcggccaacgcgcagaagatccaggtgctgcagcaggcgccgggcgccggg
cccgccgtggccgtgccgcccgcgcaggtggtggccggcgccgcgcagcgcttgaccgtg
ccgctcaaggtggtgctgcagccccagggcatcgtggtggtggtgggacgtcatgggggt
ggtgggacgtggtggagagaatgggacattgtggtggtgaaatgtggtggtggtggtgga
gatcatgggggtggtgggagatccaccatcacgcccgtggtgggcaagaagcgcaagcgc
aacgcgtcctcggacaactcggacgccgaggcgatgccggcaccagcgccgcgcgaggag
gaggagagcagcgtgcagaagcgccgctccaaccggcaggtgaagcgcaagaagtacacg
gaggacctggacatcaagatcaccgacgacgaggaggacgaggagctggacgtcacgggg
cccgtgaggaccgagcagccgccggccccgcagctccccgtgcccgagcctgagcccgag
ggcgagaccttgccctccatgcagttctttgtggagaaccccagcgaggaggacgccgcc
atcgtggacaaggtgctctccatgcgggtggtcaagaaagagctcccgtcggggcagttc
acggagtccgaggagttcttcgtcaagtacaagaactactcctacctgcactgcgagtgg
gccaccatcgaccagctggagaaggacaagaggatccaccagaagctgaagcgcttcaag
accaagatgacgcagatgcggcacttcttccacgaggatgaggagcccttcaacccggac
tacgtggaggtggaccgcatcctggatgagtcgcacagcgtcgacaaggacaacggcgag
cccgtggtctactacctggtcaagtggtgctcgctgccctacgaggacagcacgtgggag
ctcaaggaggacgtggacgagggcaagatcggcgagttcaagcgcatccaggcgcggcac
ccggagctcaagcgcgtggcgcgtccgcaggcgggctcctggaccaagctggagctctcg
cgcgagtacaagaaccacaaccagctccgcgagtaccagctcgagggcgtcaactggctg
ctcttcaactggtacaacaggcagaactgcatcctggctgacgagatgggcctgggcaag
accatccagtccatcgccttcctgcaggaggtctacggcgtgggcgtgcgcgggcccttc
ctggtcatcgcgccgctctccaccatcaccaactgggagcgggagttcaacacgtggacc
gagatgaacaccatcgtctaccacggcagcctggcctcgcggcagatgatccagcagtac
gagatgtactgcaaggacgcccggggccgcctcatccccggcgcctacaagttcgacgcg
ctcatcaccaccttcgagatgatcctgtcggactgccccgagctgcgggagatcgagtgg
cgctgcgtggtcatcgacgaggcccaccgcctcaagaaccgcaactgcaagctcctcgac
agcctcaagcacatggacttggagcacaaggtcctactgacgggcaccccgctgcaaaac
accgtggaggagcttttcagcctcctgcacttcctggagccctcgcagttcccctcggag
gccgagttcctcaaggactttggggacctcaagacggaggagcaggtccagaagctccag
gccatcctcaagcccatgatgctgcggcggttgaaggaggatgtggagaagaacctggcc
cccaagcaggagaccatcattgaggtggagctcaccaacatccagaagaaatattaccgg
gccatcctggaaaagaacttctccttcttgtccaagggcgctgggcacaccaacatgccc
aacctgctcaacaccatgatggagctgcgcaagtgctgcaaccacccctacctcatcaac
ggcgccgaggagaagatcgtggccgagttccgcgagtcgtggccggcgctgccgccgccc
gacctccacctgcaggccatggtgcgctcggccggcaagctggtgctcatcgacaagctg
ctgcccaagctcaaggccggcggccacaaggtgctcgtcttctcccagatggtccgctgc
ctcgacatcctggaggactacctcatccagaagaggtacctctacgagcgcctggacggg
cgcgtgcggggcaacctgcggcaggcggccatcgaccgcttcagccggcccgactcggac
cgcttcgtcttcctgctgtgcacgcgggcgggcgggctgggcatcaacctgacggccgcc
gacacctgcatcatcttcgactcggactggaacccccagaacgacctgcaggcgcaggcg
cgctgccaccgcatcggccagagcaaggccgtcaaggtctaccgcctcatcacgcgcaac
tcctacgagcgggagatgttcgacaaggccagcctcaagctgggcctcgacaaggctgtg
ctgcagtccatgagcggccgcgagggcagcattgccgggatccagcagttctccaagaag
gagattgaggacctgctgcgcaagggcgcctacgccgccatcatggaggaggacgacgag
ggctccaagttctgcgaggaggacatcgaccagatcctgctgcgccgcaccaccaccatc
accatcgagagcgagggcaagggctccaccttcgccaaggcgagcttcgtggcctccgag
aaccgcaccgacatcgccctggacgaccccaacttctggcagaagtgggccaagaaggcc
gacctggacctggagctgctcaacagcaagaacacgctggtgatcgacacgccgcgcgtg
cgcaagcagacgcgccacttcagcacgctgcgcgacgacgacctcgtggagttctcggac
ctggagagcgaggacgaggagcggccgcgcgcgcggcgccacccccagccccacgcgccg
ccccacgcctacggccgcaccgactgcttccgcgtggagaagcacctgctggtctacggc
tggggccgctggcgggagatggcggcgcgcgggcgcttcaagcggcgcctggccgagcgc
gacgtggagaccatctgccgcgccatcctggcctactgcctgctgcactaccggggcgac
gaggcgctcaaggccttcatctgggacctcatcggccccgccgagaacggccgcgccaag
gagctgcccaaccactcgttgtccgcgccggtgccacggggccgcaagggcaagaagggg
aaggcgccgggcggcgccgaggcgcccaaggccgagtggctccggcgctgcgaccccgcc
gcgctcttccaggacgagggctacaagaagcacctcaagcaccagtgcaacaaggtgctg
ctccgcgtgcgcatgctctactacctgcgccaggagctcatcggcgagcaggccgagaag
gtgctggcgggcgccgcggccagcgacgtcgacatctggttcccgctggtggagcagcag
gaggtgcccgcggcctggtgggacgccgaggccgacaagtccctgctgctgggcgtcttc
aagcacggctacgagaggtacaacacgatgcgcgccgaccccgcgctctgcttcctggcc
aaggccggccgccccgacgagcaggccgtggccgccgagcagcacctggacgcggccgac
ggcctcgacttcgacaaggacgatgacgtcaacgggggcgccgatgatgacgtcaacgat
gacgtcaatggggacgccgacgatgacgtcaatggggacgccgacgatgacgccagcgat
gacgccaatgggggcgccaatgatgacaccaacgatgacgccaacgatgacgtccatggg
gacaccaacagtgacaccaacgttgacacccatgatgacccccatggggaccccagcaat
gacaccaatggggaccccaatgatgacccccacgatgacccccatggggacccccatggg
gacccccatggctccgagtcgggctcctgcgacgacgacagcgacgaggagcgcgggccg
ggcgttcccggcgcgccgaagctctccgaggaggacgaggatgaggaggacgaggaggac
gaggagtcgccgccgtcgccgcccacgtcccgcgagggcgactccccggagcagccgccg
gagccgccgccggagcggccgccgccgcccgactggcccaaggagcgggcgctggcgcgg
cgcctggagctcgtgtgccaggcggtgctgtcgggcgagtggcccgaggggccgcgcggc
gccgagcccggcgccttcacccgcctgcggccgggccccggcgacaagggcttcagcgtg
cgcatcaaggacgaggaaggcctcaagctgacgttccagaagcagcgcccggcccccaac
ggggcgctgcgcgagcgcggccccccgcccggcgccaagagggccgccaagaagcccccg
gaggccgccggcctccgcgcgcccttcgcgccaccggagccgagcgagcggcacaagcag
cacaagtggccacgcggcggcgcccacgagcccgcgggcctccccgcgcgccgcgccgac
atccccggcgacaaggcgctgcgggcgagcggccgcgggcgccgcatcggcgtcttcagc
aaggacaagttcccgggggacttcatgcgcagctggaacgagtgcctggcccgcgagggc
ttcgagaaggtggacatcagcgcggtggtggcggccaccatggcggtgaaggaggacggg
gagctgcagctcatgcgcaaggcggccaccatcacctccgagctcttcaacaagttcttc
aaggagcgcgtcatggagatcgtcgacgccgacgagaaggtgcgccacagcaagctggcc
gaggcggtggagaaggccatcgaggagaagaagttcctggcgggcgccgagccctcggcc
gtggagatgtgctacccgcccatcatccagagcggcggccactacagcctcaagttcagc
gtggtcagcgacaagaaccacatgcacttcggcgccatcacgtgcgccatgggcatccgc
tacaagtcctactgctccaacctggtgcgcacgctcatggtggacccgccgcaggacatg
caggacaactactgcttcctgctgcagctgcaggacgagctgctcaaggagctgcggcac
ggtgcccgcctctgcgacgtctacgccgccgtcatggacctggtgaagaggcagaagccg
gagctgctgggcaagatcaccaagaacctgggcttcgccatgggcatcgagttccgcgag
ggctccctcgtcatcaacagcaagaaccagcagcgcctcaagaagggcatggtgttcagc
gtcaacatcggcttctcggagctgcccaacaaggagggcaagaagcctgaggagcgcacg
tacgccatgttcgtgggcgacacggtgctggtggacgaggacgccccggccaccgtcctc
acaaccgtcaagaagaaggtcaagaacgtcggcatcttcctcaagaacgaggacgaggag
gaggaggaggaggagaaggacgaggcggaggacctgctgggccgcagctcccgggcggca
ctgctcaccgagcgcacacggaacgagctcacggccgaggagaagcgccgggcccaccag
aaggagctggccatgcagctcaacgaggaggcccgccggcgcctcaccgagcagaagggc
gagcagcagatacagaaggcccgcaagtccaacatctcctacaagaacccggcgctcatg
cccaaggagccgcacatccgcgagatgaagatctacatcgacaagaagtacgagaccgtc
atcatgcccgtcttcggcatcgccacccccttccacatcgccaccatcaagaacatcagc
atgtcggtggagggcgactacacctacctgcgcatcaacttctactgcccgggcagcgcc
ctgggccgcaacgagggcaacatcttccccaaccccgaggccaccttcgtcaaggagatc
acctaccgcgcgtccaacatgaagacgccgggcgagcagacggtgccggcgctcaacctg
cagaacgccttccgcatcatcaaggaggtgcagaagcgctacaagacgcgcgaggccgag
gagaaggagaaggagggcatcgtcaagcaagactcgctggtcatcaacctcaaccgcagc
aaccccaagctcaaggacctctacatccgccccaatatcgcgcagaagaggatgcagggc
tcgctggaggctcacgtcaacggcttccgcttcacctcggtgcgcggcgacaaggtggac
atcctctacaacaacatcaagcacgccgtcttccagccctgcgacggcgagatgatcatc
gtcttgcacttccacctcaagaacgccatcatgttcggcaagaagcgccacacggacgtg
cagttctacacggaggtgggcgagatcaccacggacctgggcaagcaccagcacatgcac
gaccgcgacgacctctacgccgagcagatggagcgggagatgcgccacaagctcaagacg
gccttcaagaacttcatcgagaaggtggaggcgctcaccaaggaggagctggagttcgag
gtgcccttccgcgagctggggttcaacggggcgccctaccgcagcacgtgcctcctgcag
cccaccagcagcgccctggtcaactgcaccgagtggccgccgttcgtggtgacgctggac
gaggtggagctcgtgcacttcgagcgcgtccagttccacctcaagaacttcgacctggtc
gtggtctacaaggactacggccgcaaggtcaccatgatcaacgccatccccgtggcctcg
ctcgaccccatcaaggagtggctcaactcctgcgacctcaagtacacggagggtgtccag
tcgctcaactggaccaagatcatgaagaccatcgtggacgatcccgagggattcttcgag
cagggcggctggtccttcctggagcccgagggcgagggcagtgacgtcgacgccggcgag
tccgagtcggagatggaggacgagaccttcaacccgtccgaggaggactacgaggaggag
gaggaggacagcgacgaggactactcctccgaggccgaagagtcggaatattccaaggaa
tccctgggcagtgaggaggagagcggcaaggactgggacgagctggaggaggaagcgcgg
aaagccgaccgcgagagccagtacgaggaggaggaggagcacagccggagccgcaagagg
aaggctccggccgcccgcggcgcccgcggcccggcccgcgcgcccggccccccccggaag
aagaggaagtag
DBGET
integrated database retrieval system
