Nothoprocta perdicaria (Chilean tinamou): 112955886
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Entry
112955886 CDS
T07556
Symbol
SCN1A
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
npd04040
]
112955886 (SCN1A)
Ion channels [BR:
npd04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
112955886 (SCN1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
FraC
Lustrin_cystein
New_glue
HB_ELP1
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
112955886
NCBI-ProteinID:
XP_025905168
Ensembl:
ENSNPEG00000001543
LinkDB
All DBs
Position
Unknown
AA seq
2014 aa
AA seq
DB search
MEQSVLVPPGPDSFQYFTRESLAAIEQRIAAEKAKNPKQDRKDNDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDMDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPENFTFETNITSQFNSTI
GENGTLVNSTVTPFDWKGYIEDESHFYFLEGQNDALLCGNSSDAGQCPEGYTCVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQAAAVAAAAAAASAESREPS
AAEGAGGLSESSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRR
KGFRFSIEGNRLTYEKKYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDIGSENDFA
DDEHSTFEDNDSRRDSLFVPRRHGERRNSNISQASRSSRMLAVFPVNGKMHSTVDCNGVV
SLVGGPSAPTSPVGQLLPEVIIDKPATDDNGTTTEPEMRKRISGSFHVSMDYLEDPALRE
RAMSIASILTNTVEELEESRQKCPPCWYKFANIFLIWDCSPHWLKVKHIVNLVVMDPFVD
LAITICIVLNTLFMAMEHYPMTPEFNNVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEG
WNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALG
NLTLVLAIIVFIFAVVGMQLFGKNYKECVCKIASDCVLPRWHMQDFFHSFLIVFRVLCGE
WIETMWDCMEVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAVTDDDNEMNN
LQIAVARMQKGIDYVKRKAREFLQKAFVKKQKALDEIKPLDDLNNKNSCISNHTNMEINK
DHDFNKDGNGTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEE
FSSESDLEESKEKLNLSSSSEGSTVDIGLPAEEQPEIEPEEAQEPEACFTEGCVRRFKCC
QVSVEEGRGKQWWNLRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTML
EYADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAI
KSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK
FYYCVNTTTDERFEVDQINNFSQCEELIKNNQSARWKNVKVNFDNVGFGYLSLLQVATFK
GWMDIMYAAIDSRDVLMQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK
FGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTQQVFDISIMILIC
LNMVTMMVETDDQSDEMENILYWINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVV
ILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFN
IGLLLFLVMFIYAIFGMSNFAYVKREAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAP
ILNSGEPDCDPHKAHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFGVA
TEESAEPLSEDDFEMFYEVWEKFDPDATQFXEXXKLSDFAAXLXPPLXJXKPNKVQLIAM
DLPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMASNPSKASYEPITTTLKR
KQEEVSAVIIQRAYRRHLLKRTVKQASFIYNKNKTEGGAGLGIKDEILIDKLNENSFTEK
TDITASTAVCPPSYDRVTRPVTEKHEKEGKDVQK
NT seq
6045 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtcagtgcttgtaccaccaggaccagacagcttccaatacttcaccagagag
tctcttgcagctattgaacagcgcattgctgcagaaaaagctaagaaccctaaacaagat
cgtaaagacaatgacgacgaaaatgggccaaagccaaacagtgacttggaggcaggaaaa
acacttcccttcatttatggcgacatacccccaggaatggtgtctgagcccttggaggac
atggatccatattatatcaataaaaaaacctttatagtattgaataaagggaaggcaatc
ttccgattcagtgccacttctgccctgtacattttaactcctttcaatcctcttagaaaa
atagcaattaaaattttggtacattcattatttagcatgctgatcatgtgcactattttg
acgaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtagaatat
acgttcactggaatatatacatttgagtcgcttataaaaatcattgcaagaggcttctgt
ttagaagattttacttttctgcgagatccatggaactggcttgacttcactgtcattacc
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcttgaagactatcgtgggagcc
ctaattcagtctgtgaagaagctatcggatgtcatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggaaacttgagaaataaatgcctgcag
tggcctccagaaaattttacttttgaaacaaatattacttcccagttcaacagcacaata
ggggaaaatggtacattggttaattcgacggtgactccatttgactggaaggggtacatc
gaggatgaaagtcatttttattttctggaggggcaaaatgatgctctgctctgtggtaac
agttctgatgctgggcagtgcccagaaggatatacatgtgtgaaagctggtagaaacccc
aattatggctatacaagttttgacaccttcagttgggcttttctgtcactgtttcgcctg
atgactcaagacttctgggagaacctttaccaattgactctacgtgctgctgggaaaaca
tacatgatattttttgttttggtgatttttctgggctctttctatctgatcaacttgatc
ctggctgtggttgccatggcttatgaagagcagaatcaagcaactttggaagaagcagag
cagaaagaggcagaatttcagcaaatgctggaacaactgaaaaagcagcaggaagcagct
caggcagcagcggtggcagcagcggcagcagcagcatctgcagagtccagagagcccagt
gctgctgaaggagctggggggctctcggaaagctcttcagaggcatcaaaactgagctct
aagagtgcaaaagagaggagaaatagaaggaagaaaagaaaacagaaagagcagtcagga
ggagaggaaaaagatgaagatgaatttcacaagtctgaatcagaagacagcatcagacgg
aaaggtttccgattctctatagaagggaatagactgacatatgagaagaagtactcttct
ccacatcagtctttactgagcattcgtggctccctgttttccccaagacgcaacagcaga
acaagtctcttcagcttcagaggccgagcgaaggacataggctctgaaaatgacttcgct
gacgatgaacacagcacttttgaagacaatgacagccgaagagattctctctttgtgccg
cgcagacacggtgaacggcgcaacagtaacataagtcaggccagcaggtcatcgaggatg
ctggcagtgtttccagtgaacgggaagatgcacagcactgtggattgcaatggggtagtt
tctctggttggtggaccatctgctcctacatcgcctgttggacagcttctgccagaggtg
ataatagataaaccagctactgatgacaatggcaccacaacagaaccagaaatgagaaag
agaatatcaggctcttttcatgtttctatggattatctagaagatccagctttaagagaa
agagcgatgagtattgctagcatactcacaaacactgtggaagaacttgaagaatcaaga
caaaagtgtccaccgtgctggtataaatttgcaaatattttcttgatctgggactgcagt
ccacactggttgaaagtaaaacatatcgttaacttagtggtgatggatccatttgtcgat
ctggccattactatttgcattgttttaaatacactctttatggccatggaacattatcca
atgactcctgaattcaataatgtcctttcagtcggaaatctggtcttcactgggatcttc
acagcagaaatgtttctcaagataattgcaatggacccttactattacttccaggaaggc
tggaatatttttgatggttttattgtaacccttagtttggttgaacttggtcttgcagat
gtggaaggactgtcagttcttcgatcattcagattgttacgagttttcaaattagcaaaa
tcttggccaacgctaaatatgctgataaaaattattggtaactctgtgggtgctctagga
aatttgaccctagtactggccatcattgtcttcatttttgctgtggttgggatgcagctc
tttggcaaaaactacaaggaatgtgtctgcaaaatcgcaagtgactgtgtactcccccgc
tggcacatgcaagattttttccactctttcttgattgtattccgagtgctgtgtggggaa
tggatagagaccatgtgggactgcatggaggttgcaggccaagccatgtgccttactgtc
ttcatgatggtcatggtgattggaaacctagtggtactgaacctattcttggctttacta
ttgagctcttttagtgcggacaaccttgctgtcacggatgatgacaacgaaatgaacaat
ctccaaattgctgtggcaagaatgcagaagggcatagattatgtgaaaagaaaagcacgt
gaattcctccaaaaagcttttgttaaaaaacaaaaagcattagatgaaatcaaaccactt
gatgatttaaataacaaaaatagctgtatttctaaccatacaaatatggaaataaacaag
gaccatgattttaataaagatgggaatggaacaactagcggcataggcacaggcagcagt
gtggagaagtacataattgatgaaagtgattacatgtcattcataaataacccaagcctc
acagtgacagtgcccattgctgtgggtgaatctgacttcgaaaatttaaatacagaggaa
tttagcagtgaatcagatttggaagaaagcaaagagaagctaaatttgtccagttcttct
gaaggcagcacggttgacatcggacttcctgcagaagaacaaccagaaattgaacctgaa
gaagcccaggaaccagaggcctgcttcacagaaggctgtgtacgaaggttcaagtgctgt
caagtaagtgtagaagaggggagaggaaaacagtggtggaaccttagaaaaacctgcttc
aggattgttgagcacaactggtttgagacgttcattgtctttatgattcttctgagcagt
ggtgctctggcatttgaagatatatatattgaacagcgcaaaactatcaagaccatgctg
gaatatgctgacaaggtcttcacttacatcttcattctggaaatgttacttaagtgggta
gcttatggctatcaaacatactttactaatgcctggtgctggctggatttcctgattgtc
gatgtatctttggttagcttaacagcaaatgcattgggttactctgagcttggcgccatt
aagtcccttaggacactaagagctttgagacctctaagagctttgtcacgatttgaaggc
atgagggtggttgtgaatgcccttttaggagcaattccatccatcatgaacgtgcttctc
gtttgtcttatattctggctcattttcagcatcatgggagtaaatctgtttgctgggaag
ttctactactgtgttaacaccacaactgatgaaaggtttgaagtcgaccaaatcaacaat
tttagtcagtgcgaggaactcataaaaaacaatcagagtgcccgatggaaaaacgtgaaa
gtaaactttgataatgtaggatttgggtatctttctttacttcaagtagctacatttaaa
ggctggatggatattatgtatgcagctattgattcaagagatgtattaatgcaacccaag
tatgaagacaacctgtacatgtacttgtattttgtcatctttatcatttttgggtctttt
ttcaccctaaatctatttattggtgtcattattgataacttcaatcaacaaaaaaagaag
tttggaggtcaagacatatttatgacagaagagcagaagaaatactacaatgcaatgaaa
aagttgggatccaaaaagccacagaaacctataccaagaccagggaacaaatttcaaggc
atggtattcgattttgtgactcagcaagtatttgacatcagcatcatgattcttatatgt
cttaacatggttaccatgatggttgaaactgatgaccaaagtgatgaaatggaaaatatt
ttatactggataaacttagtattcattgtacttttcaccggagaatgtgtactgaaatta
atttcacttcgtcattactattttaccataggctggaacatctttgattttgtagttgtc
atactctcaatagtcggcatgtttctagctgagatgattgagaagtattttgtgtccccc
accctgttccgagtcattcgacttgccagaatcggtcgcatcctgcgtctcattaagggc
gcgaagggcatccgcactctgctctttgctttgatgatgtctcttcccgctttgttcaac
attggcctcctgctcttcctggtcatgtttatctatgccatctttggaatgtccaacttt
gcctatgtcaagagggaagctggtatagatgacatgttcaattttgaaacctttggcaac
agcatgatctgtctcttccaaattaccacatctgctggctgggatggtttgttagcccct
attctcaacagtggggagccagactgcgaccctcataaagctcatccgggcagctctgtg
aaaggagactgtggcaacccttctgttgggatcttcttctttgtcagctacattatcata
tcgttcctggtggtggtgaacatgtacattgctgtgattttggagaacttcggtgttgct
actgaagaaagtgctgagcccttgagcgaggatgactttgagatgttctatgaggtttgg
gagaagttcgatccagatgcaacacagttcatrgartwyrrkaaaytrtcwgattttgca
gcwkcyctwgakcctcctctkcwymtascmaarccaaacaaagtccagcttattgcaatg
gatctgcccatggtaagtggggacagaattcactgccttgacatcttgtttgctttcaca
aagcgtgttttgggggaaagtggagagatggatgccctcagaatacagatggaagatcgg
tttatggcatcaaatccttctaaagcctcctatgaaccaattacaaccacattaaaacga
aaacaggaagaagtctctgctgtcattattcaacgtgcttatagacgtcaccttttaaag
cgaacagtaaaacaagcttcctttatctataacaaaaataaaactgaaggaggggctggt
ctcggtatcaaagatgaaattcttattgacaagttaaatgaaaactcatttacggagaaa
acagatataactgcgtcaacggcagtttgtccaccgtcttatgatcgtgtaacaagacca
gtcacagaaaagcatgaaaaggaaggtaaagatgttcagaaataa
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integrated database retrieval system
