Nothoprocta perdicaria (Chilean tinamou): 112956001
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Entry
112956001 CDS
T07556
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112956001 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npd03019
]
112956001 (BARD1)
04121 Ubiquitin system [BR:
npd04121
]
112956001 (BARD1)
03036 Chromosome and associated proteins [BR:
npd03036
]
112956001 (BARD1)
03400 DNA repair and recombination proteins [BR:
npd03400
]
112956001 (BARD1)
Messenger RNA biogenesis [BR:
npd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
112956001 (BARD1)
Ubiquitin system [BR:
npd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
112956001 (BARD1)
Chromosome and associated proteins [BR:
npd03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
112956001 (BARD1)
DNA repair and recombination proteins [BR:
npd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
112956001 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4_2
PTCB-BRCT
zf-C3HC4
NIBRIN_BRCT_II
ANK_LRRK2
RTT107_BRCT_5
zf-C3HC4_4
zf-RING_UBOX
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
112956001
NCBI-ProteinID:
XP_025905270
Ensembl:
ENSNPEG00000009260
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MREALRGRSGNRPPRHGDGDSDGDGAGPAMGPPGCGWARTRAALARLEAALRCSRCGSVL
REPVSLGRCEHVFCLSCVGDCVGRECPACHTPAWVQDAQINRQLDNMIQLCSKLRHLLGE
DASDSTQVTSAQPGPDCEAKGKKEQIKMWFSPRSRKIRCTLSKRQPVTKSNNVCEDPSSV
YHFFPSPPHEKPPKQVKKPTHKLSKKMKKKRLADINKVWGFQKLKQKGEVEQICNREKCV
TICSQPVTLCTPEPNSPEESLQQESVKDSSRNMENLRISPQVRFSEKKVINADVCPAQGS
KEEVCVPEKPLSVVNEATPLKRGREQVRFPVTSESKRPRRSERILTRSSGSQESCLEELP
QGSPISLLSESLSPVRVCSSVSKRPVDTIMKTRSSAHSQEINSPSLSEVPSTPSTSKTCN
QIGIPPSPSVLKSPGSNMITRRNHKGETLLHVASIKGDLAAVEQLLKNGADPNVKDNAGW
TPLHEACNHGHKEVVELLLQHRALVNTTGYQNDSPLHDAAKNGHVSVVKLLLLHGASRDA
VNIFGLRPVDYAESEKMKSVLQLPMRNASLPLNQPSEPMSPSQPREGPLGILGSNLSSEQ
QKLLNKLAAALKARRCTEFNSTVTHLVVPDAPMPSTVKCMMAVLTGCWVLKFEWVRACLQ
TKAREQEEKYEVQGGPQRGRLNREQLLPKLFDGCYFYFLGSFTRPQKSDLSELVKAAGGQ
VLVRQPKPESDVTQTVNTVAYHAEPASDQRFCTQYVIYDTASKFKPEKIRQGKVWMAPSS
WLVDCVMSFQLLPVK
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaggcgctgcgcggccgctcgggcaaccggccgccccgccacggggacggcgac
agcgacggcgacggcgctggccccgccatggggccgccgggctgcggctgggcccgcacc
cgcgccgccctggcgcggctggaggccgccctgcgctgctcccgctgcggcagcgtcctg
cgggagcccgtgtccctggggcgatgcgagcacgtcttctgcctatcttgtgtgggcgac
tgcgttggcagagaatgccccgcgtgccacacgccagcctgggtacaagatgcgcagata
aaccggcaactcgataacatgatccagctctgcagcaaactgcggcatctgctgggggag
gacgcctcagattcaacacaagttacatctgcacaaccaggccctgattgtgaagcaaag
ggtaagaaggaacagataaagatgtggttcagcccaagaagcaggaagattagatgcacc
ctgagcaagagacagccagtaactaaaagcaataatgtttgtgaagatccctcttcagtt
tatcatttctttccttcccctcctcatgagaagcctcctaagcaggtcaaaaagccaaca
cacaaactgagtaagaagatgaagaagaagcgtctagcagacatcaacaaagtgtggggc
ttccagaaacttaagcagaaaggagaagttgagcagatctgtaatagggaaaagtgtgtg
acaatttgtagtcaaccagtaaccctgtgtaccccagaaccaaatagccctgaggagtcg
cttcagcaggaatcagtaaaagattccagcagaaatatggaaaatctgagaatatcccca
caggtaagattctcggagaagaaagttatcaatgcggatgtgtgtcccgcacaaggcagc
aaggaagaagtttgtgttccagagaaaccactgtcagtagtaaatgaagccactccttta
aaacgtggaagggagcaggtcaggtttccagttacttcagagtctaaaagaccaagaaga
tccgagaggatccttactaggagttcaggcagtcaagagtcttgcttagaggagttgcct
cagggctctcccatctccctgctgtctgaaagcctaagtccagttcgtgtttgttcctct
gtatcaaaacgccctgttgatactataatgaagacaagaagctctgcacactcccaagag
ataaacagtccttcactttcagaagttccttctactccatctacttccaagacttgtaat
cagataggaataccacccagtccttctgtgttgaagtctcctggtagtaacatgatcacc
agaagaaatcacaaaggggagactttgctccatgttgcttccatcaagggtgatttagcg
gctgttgaacagctactaaaaaatggagctgatcctaatgtcaaagacaatgctggttgg
acaccactgcacgaggcatgtaaccacgggcacaaggaggtggtggagctgttgctgcag
cacagagcactggtgaatactactggctatcagaacgactccccacttcatgatgctgcc
aagaacgggcacgtgagcgtggtcaagctgctgcttttgcatggtgcatcccgtgatgca
gttaatatatttggtttgcggcctgtggactatgcggaaagtgaaaagatgaagtctgtg
ctacagttaccaatgagaaatgcatcactgccacttaaccaaccctctgagccaatgagc
cctagccagccaagggagggacctcttggtattcttgggagcaatcttagttcagagcag
cagaaattgctgaataagctagcagcagctctgaaggctcgaagatgtactgaatttaac
agcacagtaactcatcttgttgtccctgatgctccaatgccgagcactgtcaaatgcatg
atggctgttttgactggatgctgggttctcaagtttgaatgggtacgagcctgtctgcaa
accaaggcgcgagaacaagaggagaagtatgaagtccaaggcggcccacaaagaggccgg
ctcaacagggaacagctgctgccaaagttgtttgatggctgctacttctattttttggga
tccttcacccgtccccagaagagcgatctttcagagctggtcaaagcagcaggagggcaa
gtcctagttcggcagccgaagcccgagagcgatgtgacgcagacggtcaacacggtggcc
tatcacgcagaacccgcttctgaccagcgattttgcacgcagtacgtcatctacgacaca
gcttctaaattcaagccagagaagattcgtcagggtaaggtgtggatggccccctccagc
tggctcgtggactgtgtgatgtcttttcagctgctgccggtaaagtga
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integrated database retrieval system
