Nothoprocta perdicaria (Chilean tinamou): 112956124
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Entry
112956124 CDS
T07556
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112956124 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npd03041
]
112956124 (PRPF4)
Spliceosome [BR:
npd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
112956124 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
112956124
NCBI-ProteinID:
XP_025905415
Ensembl:
ENSNPEG00000005089
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MASARPPAARAPPRPPVRPPAPPEVAVRPVPATKSKAAEEGDAPPAKRAPIFYGSLEEKE
RERLAKGESGLLGKEGMKAAIEAGNINISSGEVFDLEDHMSERQAEVLAEFERRKRARQI
NVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKSRKDDDRSKKSK
EEYQQTWYHEGPRSLKTARLWLANYSLPRAAKRLEEARLFKEIPEATRTSQRQELHKSLR
SLNNFCSQIGDDRPLSYCHFSPNSKFLATACWSGLCKLWSVPDCNLVHTLRGHNTNVGAI
VFHPKATISVDKKDVNLASCAADGSVKLWSLESDEPVADIEGHTMRVARVMWHPSGRFLG
TTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRIWDLRTGRC
IMFLEGHLKEIYGINFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEP
NHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLW
TAE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcgcggcccccggcggcgcgcgcgcccccgcgcccccccgtgcggcctccc
gcgccgcccgaggtggcagtgcggccggtaccggccacgaagagcaaggcagcggaggag
ggcgatgctcccccggccaagagagcccccatcttctatggcagcttggaggagaaggag
agggagcgcctggcgaagggagagtcgggtctgctgggaaaggagggaatgaaagctgcg
atcgaggccggcaacatcaacatcagcagcggggaggtctttgatctcgaagaccacatg
agcgagcggcaagccgaggtcctggccgagttcgagcgccgcaagcgagcgcggcagatc
aacgtttccacggacgactcggaagtgaaggcctgtctgcgagccctcggggagcccatc
acgctcttcggagaagggccggcagaaaggagggagagattacgaaatatcctttcagtg
gttggcacagatgccttgaaaaagagtagaaaagatgacgacaggtctaaaaaatccaaa
gaagagtatcagcaaacctggtaccatgaaggaccacgcagtctgaagacagccaggctg
tggcttgctaactactcactccccagggcagcgaagcggctggaagaagcccggctgttc
aaggagattccagaggccaccagaacatcgcagagacaggagctgcacaaatccctgcgg
tccttgaataacttctgcagtcagattggagatgatcgcccgctgtcctactgccatttc
agtcccaattccaaattcctcgctactgcctgctggagcgggctgtgcaagctctggtct
gtgcccgactgcaacctcgtccacaccttgcgaggacataacaccaatgtcggagcaata
gtcttccatcccaaagccaccatctccgtagacaagaaggacgttaacctggcctcctgc
gcggccgatggttctgtcaaactttggagccttgagagcgatgaacccgtggcagatatc
gaaggtcacaccatgagagtggcacgtgtgatgtggcacccatctggacggttcctgggc
actacctgctatgatcactcctggcgcctgtgggacttggaagctcaggaagagatcctg
catcaggagggacacagcaaaggggtctatgatatcgcctttcacacggatgggtctctt
gctgggactggcggcctggatgcctttggtcggatatgggacttgcgcacgggacgctgc
atcatgtttctggaaggccacctgaaggagatctatggcattaacttctccccaaatggg
taccatgttgcaactggcagtggtgacaatacttgcaaagtgtgggacctccgtcagagg
aagtgcatctacaccattcctgcccatcagaacctggtgacgggggtgaagtttgaaccc
aatcacggaaacttcctgctcacaggcgcttacgataacacagcaaagatctggactcac
cctggctggtctcctttgaaaacactggctggccacgaggggaaggtcatgggcctggat
atctccctcgatggccagctgatagcgacgtgttcgtatgacagaaccttcaagctgtgg
acagcggaatag
DBGET
integrated database retrieval system
