Nothoprocta perdicaria (Chilean tinamou): 112956378
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Entry
112956378 CDS
T07556
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03030
DNA replication
npd03410
Base excision repair
npd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112956378 (POLE)
03410 Base excision repair
112956378 (POLE)
03420 Nucleotide excision repair
112956378 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npd03032
]
112956378 (POLE)
03400 DNA repair and recombination proteins [BR:
npd03400
]
112956378 (POLE)
Enzymes [BR:
npd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
112956378 (POLE)
DNA replication proteins [BR:
npd03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
112956378 (POLE)
DNA repair and recombination proteins [BR:
npd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
112956378 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
112956378
NCBI-ProteinID:
XP_025905665
LinkDB
All DBs
Position
Unknown
AA seq
2274 aa
AA seq
DB search
MGLRGGDPEGARDDGSSLSALKRLERSQRTDRLDALFGFERPAEPGERTGWLLNMHPTEV
LDEDRRLVSAVDYYFIQEDGSRFKVALPYKPYFYVATQKGCEREVSSFLSKKFQGKISKL
ETIPKEDLDLPNHLVGLKRNYIKLSFNTVDDLVKVRKEISPAVRKNRERDQANDVYTSML
SSALAGGSLTTDDEGPSKKVANQMDNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGS
IYPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNRE
IVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIIVTYNGDFFDWPF
VEARAAAHGINMYQEIGFQKDSQGEYKAPQSIHMDCLRWVKRDSYLPVGSHNLKAAAKAK
LGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEPDE
VLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVEALESGV
FRSDIPCRFKMNPAAFDFLVQHVEKTLRHAIEEEERLPLDQVTNFQEVCDEIKKKLNSLK
DVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRRMTWQW
RGEFMPASRSEYHRIQQQLESEKFPPLYPDGAPRAFHELSREEQAKYEKKRLADYCRKAY
KKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLAAAVETGDASEV
KRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIE
QIGRPLELDTDGIWCVLPNSFPENFVIKSTNSKKPKVTISYPGAMLNILVKEGFTNDQYQ
ELEDPASLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGF
EVKRRGELQLVKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKAANMPDSELFE
LISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPEGSPVTE
RAIPLAIFQAEPSVRKHYLRKWLKSPSLQDFGIRAILDWDYYIERLGSTIQKIITIPAAL
QQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFTSEGKRQVLANQPQQGPSSSQVGD
IEDLGTAKRPQPLVAVAHKRKRVPAAEESQQMSQYLELSQSWREILGPPPAMGTTKEELL
VWLRYHKKKWELQARQRQERRKKRRLEDGGTVTCGGVIRDTLSKGLSSYLRRTARSILDL
PWQIVQIAETSQPGLFRLWAVIGSDLHCIKLNIPRVFYVNQRIAKTEEGAVYRKVNRILP
RSNLVYNLYEYSVPEDMYQEHINEINADLAAPDIEGVYETQVPLLFRALIHLGCVCMVSR
HLVRHLTGREAETFDIEHLEMRSLAQFTYLEPGSIRHIYLYHSSQGSRALFGLFIPSQRK
AAVFVLDTVRSNQMPNLTNMYSSERSALLEKVGEELLPPDKHTFEVRAETDLKTVYRAVQ
RLLLGYKDERRGPTLIAVQSNWDLKRLASGIPIIEEFPLVPVRVIDDISFSVLDWQRHAA
RRMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTFGSDLFFSRHLRRHNHLLWLSPT
ARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVCLELDIQSLAVNTVLQSHHINDME
GGSSVSISFDVIQQASLEDMVTGNQAANIPASYDETALCSNTFRILKSMVVSWVKEITQY
HNVYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLVAEFKRLGSSVVYANFN
RIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSRCWEFLLWMDPANYGGIKGKV
CSSIHYGEKDTSKSQVLDDDSEEEEEENREEEEENGEANVEDLLENNWNIVQFLPEAASC
QNYFLMIVSAYIVAVYHSMKEELRRNAPGSTPVKRRTTSQVSQEPVGETGAMPGMITFSQ
DYVANELTQSFFTITQKIQKKMAGSRNATEPSDMFPVLPGSYLPLNNPALEFIKYVCKVL
SLDANVTNQVNKLRRDLLRLIEVGEFSEEAQFRDPCRSYVLPEVICRNCNFCRDLDLCKD
PALSQDGSVLPGWVCSNCQAQYDSDSIEMALVEALQKKLMAFMLQDLVCKKCHGVKETHM
PVYCSCAGDFALTISSQIFMEHINVFKNIARHYSMAYLLETIEWLLRSNPQLQR
NT seq
6825 nt
NT seq
+upstream
nt +downstream
nt
atggggctgcggggcggcgacccggagggcgcgcgggacgatggctcctcgctgtccgcc
ctcaagcgcctggagcgctcgcagcgcacggaccgcctggacgcgctcttcggcttcgag
cggcccgccgagcccggcgagcgcacgggctggctcctcaacatgcacccgaccgaggtg
ctggacgaggaccggcggctggtgagcgccgtggactactacttcatccaggaggacggg
agccgcttcaaggtggccctgccctacaagccctacttctacgtcgccacccagaagggc
tgtgagcgagaagtgtcctccttcctctccaagaagttccaaggaaaaatttcaaagctg
gagaccatccccaaagaggacttggatctgcccaatcacttggtggggctgaagcgcaac
tacattaagctgtcgttcaacacggtggatgacttggtgaaggtgcggaaagagatctct
cctgctgtgaggaagaacagagagcgagaccaggcaaacgatgtctayacatcaatgctg
tcgagtgctctcgccggaggcagcctgaccacagatgatgagggaccctccaaaaaggtt
gccaaccaaatggacaacattgtggacatgcgggagtatgatgtcccttaccayattcgc
ctgtccattgacctgaagatccacgtggctcactggtacaacgtgcggtaccggggcagc
atctacccccctgaaatcacccgccgagatgaccttgtggagcggccggatcctgttgtt
cttgcctttgacattgaaactactaaactgcctttgaagtttcctgatgcagagacagac
cagatcatgatgatctcctacatgattgatgggcagggctacctgatcacaaacagggag
atcgtctccgaggatattgaagactttgaatttactcccaagccggagtatgagggtcca
ttctgtgtctttaacgaaccagatgaggctcatttaatccagaggtggtttgaacatgtc
caggagaccaaacctaccatcattgtcacctacaatggagayttttttgactggcctttt
gtggaagccagagcagcagctcatggcattaatatgtatcaggagatcggatttcagaaa
gacagtcagggggagtacaaagcaccgcagagtatccacatggattgcctgaggtgggtg
aagagagatagttacctcccagtgggcagtcacaacctgaaagcagcagcaaaagcaaag
ctggggtatgacccagtggagctggaccctgaagagatgtgccggatggctacagaggag
cctcagactctggccacctattcagtgtctgatgcagttgctacctactacatgtatatg
aagtacgtgcaccctttcatttttgccttgtgcaccatcattcccatggagcctgatgag
gtgttaagaaaaggttctgggaccctgtgtgaggcactgctgatggttcaggcctatcac
gccaacatcatcttccccaacaagcaggagcaggagttcaacaaacttacagatgacggc
cacgtgctggactcggaracatacgtaggaggccacgtagaagctctggaatcgggggtt
tttcgcagtgacatcccctgccgcttcaaaatgaatcctgctgcctttgacttcctggtg
cagcacgtggagaagacgctccggcacgccatcgaagaggaagaacgtttgccactggat
caagtcaccaacttccaggaggtttgtgatgagatcaaaaagaagctgaattctttgaag
gatgttcctaaccgaatcgagtgtccgcttatctaccatttagatgtgggggccatgtac
cccaacatcattctgaccaacaggttgcagccctcagcgatggtggatgaggccacatgt
gctgcctgcgacttcaacaagccaggtgccaattgtcagcgccggatgacttggcagtgg
agaggagaattcatgcctgccagccgcagtgagtatcaccgcatccagcagcaactggag
tctgagaagtttcctcccctgtatccggatggagcaccccgggcattccacgagctttcc
cgtgaagagcaggccaaatatgagaagaagcgactggcagactattgccgcaaggcttac
aagaagatccatgtcaccaaggtggaggagcgtgtcaccaccatctgccagcgcgagaac
tccttctatgtagacaccgtgagagctttcagagaccgtcgctatgagttcaaggggctg
cataaggtgtggaagaagaagctggctgcagccgtggagacgggagatgcctctgaagtg
aagcgctgcaagaacatggagatcctctacgactcyctgcagctggcacacaagtgtatc
ctcaactctttctacggctacgtcatgcgcaaaggagctcgctggtactccatggagatg
gctgggatcgtctgcttcactggagccaatatcatcacgcaggccagggagctcattgag
cagatcgggagacctctggaactggatacagatgggatttggtgtgtccttcctaacagc
ttcccagaaaactttgtcatcaagtcaaccaactcaaagaagcccaaggtgacaatctcc
tatccaggtgccatgctgaacatcctcgtgaaggaaggcttcacaaacgatcagtaccag
gagctggaggacccagcctctctcacctatgtcacacgctcggagaacagcatcttcttt
gaagtggatgggccctatctggctatgattctcccggcttccaaggaggagggcaagaag
ctgaaaaaaaggtacgcagtcttcaacgaagacgggtccttggccgaactgaaggggttc
gaggtgaagcgccgcggggagctgcagctggtgaagatattccagtcttctgtatttgag
gcctttctgaagggcaccaccctggaggaggtctatgcctccgtagccaaggtggctgat
tactggttggatgtgctgtacagcaaggctgccaacatgcctgattcagagctgtttgag
ctgatctcggagaaccggtccatgtctcgcaagctggaggactatggggagcagaagtcc
acgtccatcagcactgccaagcgcctggcagagttcttgggggaccagatggtgaaggac
gcagggctaagctgccggttcatcatttctaagaaacccgaagggtctccagtcacggag
agggccatcccgctggccatcttccaggcggagcccagcgtgcggaagcactacctgcgg
aaatggctgaagagcccctcgctgcaggacttcggcatccgggcgattctggactgggac
tactacattgagagactgggcagcaccatccagaagatcatcactattcctgcagccctg
cagcaggtaaagaacccagtcccacgagtccggcaccccgactggctgcacaagaagctc
ctggagaagaatgatgtgtacaagcaaaagaaaatcaacgagctcttcacttcagaaggc
aagagacaggtccttgctaaccagccccaacagggaccatccagctcgcaggttggtgac
atagaggatttggggactgccaagcgccctcagccgctggtcgcggtcgcgcacaagcgg
aagcgtgtcccggcggccgaggaaagccagcagatgtcccagtacctggaactgtcccag
tcctggcgagagatcctgggcccgcctcctgctatgggcactactaaggaagagctgctg
gtttggctgcgctaccacaagaagaagtgggagctgcaggcccggcagcggcaggagcgt
cggaagaagcggcgcctggaggacggcgggacrgtgacgtgcgggggtgtcatccgggac
accctctccaaagggctgagcagctacctgcgcaggacagcacgcagcatcctggacttg
ccctggcagatcgtgcagattgctgagaccagccagcctggcctgttcaggctgtgggca
gtgattggaagcgacctgcactgcatcaagctgaacatcccaagggtgttctacgtcaat
cagcgtattgccaaaacagaggagggagccgtgtacaggaaggtgaacaggatcctaccc
cgctcaaacttagtttayaatctctacgaatactcggtccccgaagacatgtaccaagag
cacatcaacgagatcaacgccgacctggctgctccagacatcgagggcgtgtacgagact
caggtgccgttactgttccgagcactgatccacctgggttgcgtgtgcatggtgagcagg
cacctggtgagacacctcacggggcgagaggctgagactttcgacattgagcacctggag
atgcgctcgctggctcagttcacttacctggagccaggaagcatccgccacatctacctc
taccacagctcccagggcagcagggcgctcttcggcctcttcatcccctctcagcgcaaa
gctgcagtgtttgtgctggacacggtgcgcagcaatcagatgccaaacctcaccaacatg
tactcgtcggagcgcagcgctctgctggaaaaggtgggcgaagagctgctgcctccagac
aagcacacctttgaagtgcgcgccgagaccgacctcaagacrgtctacagggccgtccag
cgactgctgctgggctacaaggatgagcgccggggccccacacttatcgctgtgcagtcc
aactgggacctgaaacgcctggcgagcgggattcccatcatcgaggagttccccttggtc
cctgtccgcgtcatagacgacatcagcttttcggtgctggactggcagcgccatgcagcc
cgccgcatgatccgccactacctcaacttggacacgtgcctctctcaggctttcgagatg
agcaggtattaccacatccccattgggaatctccctgacgacatttccacttttggctcg
gacctgtttttctcccgccacctccgtcgccacaaccatttgctgtggctctcgcccacg
gcccgccccgacctgggcggcaaggaggctgatgacaaccgtctagtcatggagtttgat
gagagagcctctgtggagataaacaaccctggctgctactccacagtgtgtctggagctg
gatatccagagcctggctgtaaacacagtgctgcagtcccatcacatcaatgacatggaa
ggaggttccagcgtgagcatcagttttgatgtgatccagcaagcctctctagaagacatg
gtgacagggaaccaagctgccaacatccctgccagctatgacgagactgccctctgctct
aacaccttcaggattctgaagagcatggtggtgagctgggtgaaggagatcacgcagtat
cacaacgtctatgcagataaccaggtgattcatttctaccgctggctccgctctccttcc
tcactgctctacgacccagcattgcaccgcactctacacaacatgatgaagaaacttttc
ctgcagttagtggctgagttcaagcgtcttggctcttcggtggtttatgccaacttcaac
cggattatcctgtgcaccaagaagcggcgaattgaggacgctatcagctacatggagtac
atcatcaacagcatccactcaaaggagatctttcactctctgactatttccttctcccgc
tgctgggagttcctgctctggatggatccagccaattatggaggtatcaagggaaaagtg
tgttctagcatccactatggggagaaggacaccagcaagagccaagtattggatgatgac
agtgaagaagaagaagaggagaacagggaggaagaagaggagaatggagaggcaaatgtg
gaggacctactggagaataactggaatattgtgcagttcctccccgaggctgcctcctgc
cagaactacttcctcatgatcgtgtcggcctacatcgtggccgtgtaccacagcatgaag
gaggagctgcggcgcaacgcccccgggagcacccccgtcaagaggaggaccaccagccag
gtctcccaggagcccgtgggggagacaggggccatgcctggtatgatcactttctcacag
gattatgtggccaacgagctcacccagagcttcttcaccatcacccagaagatccagaag
aagatggctggttcccgtaatgctactgagccttcagacatgttcccagtgctgcctggc
tcctatttgccactcaataacccagccctagaattcatcaaatatgtctgcaaggtgttg
tccctggatgccaatgtaacgaaccaggtgaacaagctgcgcagggacctgctgcgcctc
atcgaggtgggcgagttctcagaagaagcccagttccgggacccttgccgctcctacgtg
ctccctgaagtcatctgcaggaactgcaatttttgcagggacttggacctgtgcaaggac
cctgccctctcccaggacggctcagtgctgccgggctgggtgtgctccaactgccaggca
cagtatgactckgattccatcgaaatggcactggtggaagcactacagaagaagctgatg
gccttcatgctgcaggacctggtgtgcaagaagtgtcacggtgtgaaggaaacgcacatg
cctgtgtactgcagctgcgctggagactttgccctcaccatttcctcccagatcttcatg
gagcacatcaacgtcttcaagaacatcgctcggcactacagcatggcctatctgctggaa
accatcgagtggctgctgcgttcgaacccccagctccagcgctaa
DBGET
integrated database retrieval system
