KEGG   Nothoprocta perdicaria (Chilean tinamou): 112957014
Entry
112957014         CDS       T07556                                 
Symbol
BTRC
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform X1
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
npd  Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd04114  Oocyte meiosis
npd04120  Ubiquitin mediated proteolysis
npd04218  Cellular senescence
npd04310  Wnt signaling pathway
npd04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:npd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112957014 (BTRC)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    112957014 (BTRC)
   04340 Hedgehog signaling pathway
    112957014 (BTRC)
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    112957014 (BTRC)
   04218 Cellular senescence
    112957014 (BTRC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:npd04121]
    112957014 (BTRC)
   03036 Chromosome and associated proteins [BR:npd03036]
    112957014 (BTRC)
Ubiquitin system [BR:npd04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     112957014 (BTRC)
Chromosome and associated proteins [BR:npd03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     112957014 (BTRC)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_C Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I WDR55 Beta-TrCP_D Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd F-box-like Beta-prop_EIPR1 Beta-prop_RIG_2nd ANAPC4_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IP5PC_F Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_DCAF4 NBCH_WD40 F-box WD40_like Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_WDR11_2nd Beta-prop_VPS8 F-box_5 DUF4508 DUF6188
Other DBs
NCBI-GeneID: 112957014
NCBI-ProteinID: XP_025906299
Ensembl: ENSNPEG00000010216
LinkDB
Position
Unknown
AA seq 506 aa
MKTENCVAKTKLANGTSSMIVPKQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLISQ
MCHYQHGHINSYLKPMLQRDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVT
SDGMLWKKLIERMVRTDSLWRGLSERRGWGQYLFKNKPPDGTAPPNSFYRALYPKIIQDI
ETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRIL
TGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTC
SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFV
RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI
VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILI
WDFLNDPAAQAESTRSPSRTYTYISR
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgaagactgagaattgtgtggccaaaaccaaacttgccaatggcacttccagtatgatt
gtgcccaagcaaagaaaactctctgcaagctatgagaaggagaaggagctctgcgtcaag
tattttgaacagtggtccgagtctgaccaggtggagtttgtagagcacctcatctcccag
atgtgtcactaccagcatggacatataaactcatacctcaaacccatgctgcagagggac
ttcatcactgcactgccagctcggggactggaccacattgcagagaacattctgtcctac
ctggacgcgaagtcgctgtgcgcggcggagctggtgtgcaaggagtggtaccgggtgacg
tcggacggcatgctgtggaagaagctcatcgagaggatggtcaggacagactccctgtgg
aggggcttgtccgagaggagaggatggggacaatacctatttaaaaataagcctcctgat
gggactgcaccacccaactccttctacagagcactttaccccaaaattatacaggacata
gagacaatagagtcaaactggcgatgtggaaggcacagtttacagagaatccactgccga
agtgagacaagcaaaggagtttactgtttacaatacgatgaccagaagatagtaagtggc
ctacgagacaacactatcaagatctgggataagaatacattggaatgcaaacgaattctc
accggccacacaggttctgtcctgtgcctccagtatgatgaacgggtgattattactgga
tcttcagactcaactgtcagggtgtgggatgtgaacgcgggcgagatgctgaacacgctg
atccaccactgcgaagcagtgctgcacctccgcttcaacaacggcatgatggtgacatgt
tccaaggaccgctccattgccgtgtgggacatggcttcgcccacggacatcaccctcagg
agggtgctagtagggcaccgagccgctgtcaacgtagtggactttgatgacaagtacatc
gtatcagcatcaggcgacagaactataaaggtatggaacacgagtacctgcgagtttgtg
cgcaccctaaacgggcacaaacgaggcatcgcgtgtctgcagtacagagacaggctggtc
gtgagcggctcgtcggacaataccatcaggctgtgggatatcgagtgtggggcgtgttta
cgagtcctggaaggccacgaagagctggtgagatgcatccgcttcgataacaagaggata
gtcagcggggcgtatgatgggaaaattaaagtgtgggatctggtggctgctttggaccct
cgagctccagcagggaccctctgcctgcgaacccttgtggagcattctggaagagtcttt
cgacttcagtttgatgagttccagatcgtcagcagctcgcatgatgataccatcctcatc
tgggatttcctcaacgacccagctgcccaagcagaatccactcgctccccgtccagaaca
tacacctacatctcaagataa

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