Nothoprocta perdicaria (Chilean tinamou): 112957112
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Entry
112957112 CDS
T07556
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112957112 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npd03021
]
112957112 (TAF5)
03036 Chromosome and associated proteins [BR:
npd03036
]
112957112 (TAF5)
Transcription machinery [BR:
npd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112957112 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
112957112 (TAF5)
Chromosome and associated proteins [BR:
npd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
112957112 (TAF5)
STAGA complex
112957112 (TAF5)
TFTC complex
112957112 (TAF5)
SAGA complex
112957112 (TAF5)
SLIK complex
112957112 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
CDK5RAP3
WD40_like
RAB3GAP2_N
eIF2A
VPS8_N
VID27
Motif
Other DBs
NCBI-GeneID:
112957112
NCBI-ProteinID:
XP_025906467
Ensembl:
ENSNPEG00000011421
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
CSGCVSHCVFACSVCLPHEFLLFDDPFAAGGVVVEDQPDVSAVLSAYNQQGDPTLYEEYY
SGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHESEAKSFFERFHGDQECYYQDD
LRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLY
IDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLLKEPEFDVPLDDEDEEGENEEG
KPKKKKPKKESAGSKSKKQDPNAPPQNRIPLPELKDSDKLDKIMNVKEAARRVRLGPDCL
PSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVWSVTPKKLRSVKTAADLSLIDK
ESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCL
VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPN
SNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDI
GHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGH
INLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLAAGAYSSQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
tgcagcgggtgcgtgagccactgcgtgtttgcttgttctgtctgtctgcctcacgagttc
ttgctgtttgatgacccctttgcagctggaggtgttgttgtggaagaccagcccgatgtg
agcgcagtgttgtctgcctacaatcagcagggggaccccacgctgtacgaggaatactac
agtggattaaaacacttcatcgagtgctccctggactgtcatcgagctgagctctcccag
ctgttctatcccctctttgtgcacatgtatttggaactggtttacaatcaacacgagagt
gaagcaaagtctttctttgaaagatttcatggggatcaggagtgttattaccaggatgac
ctgcgcgtattatcaagcttaaccaaaaaagaacatatgaaaggtaacgagaccatgctg
gatttccgaacaagcaagtttgtgctgcgcatttcccgtgactcttaccagctcctgaag
agacatcttcaggagaagcagaacaatcagatctggaacatagttcaggagcatctctac
attgatatcttcgacggaatgcctcgcagtaagcagcagatagatgctatggttggaagc
ctggctggggaggcaaagcgagaggccaataaagcaaaggttttctttggtttacttaaa
gaaccagagtttgatgtgcctttggatgatgaagatgaagaaggggaaaaygaagaggga
aaaccaaagaagaaaaaacctaaaaaagagagtgcaggatctaaaagcaaaaagcaagac
cctaatgctcctccccaaaacagaattcctctacccgaactgaaagactctgacaaatta
gataaaataatgaatgtgaaggaggccgcaagacgtgtgcgtcttggcccygactgcctg
ccctccatctgtttctacacgttccttaatgcttatcagggtctaactgcagtggatatt
acagatgactctagcatgattgtaggaggctttgctgattctactgtcagagtgtggtcg
gtgactccgaagaagctacgtagtgtgaaaacagcagcagacctcagtctcatcgacaaa
gaatcagacgatgtcttggagaggatcatggatgagaaaacagcaagtgagttgaagatt
ttatatggtcacagtggacctgtctatggcaccagcttcagtcctgataggaactatctc
ttgtcctgttctgaggatggcactgttagattatggagtctccaaacatttacatgtttg
gtgggatataaaggacacaactatccagtatgggatacacagttttctccttatggatat
tactttgtgtcagggggacatgaccgagtggctcgtctatgggcaacagatcactaccag
cctttacggatatttgctggccatctggctgatgtgacgtgtacccgatttcatcccaac
tctaactatattgctacgggctcggcggacaggactgtgaggctctgggatgttttgaat
ggaaactgtgtgagaatattcactgggcataagggaccaattcattcactggcattttct
cccaatggacgatttctggctactggagcaacggatggaagagttctgctgtgggacatc
gggcacggcttgatggtgggagaattgaaagggcacactgacaccatctacgcactgaga
ttcagtcgagacggggagattttggcatcaggttcaatggataacacagttcggctgtgg
gatgctgtgaaagcgtttgaagatttagaaactgatgattttactactgccactggacat
ataaatttacctgaaaactctcaggatttgttactgggcacctacatgaccaaatcaaca
ccagtggtgcacctccatttcacccgcagaaacttgctgctagctgcaggagcctatagt
tcacagtaa
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integrated database retrieval system
