Nothoprocta perdicaria (Chilean tinamou): 112957122
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Entry
112957122 CDS
T07556
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npd03016
]
112957122 (TRUB1)
Enzymes [BR:
npd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
112957122 (TRUB1)
Transfer RNA biogenesis [BR:
npd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112957122 (TRUB1)
Prokaryotic type
112957122 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
112957122
NCBI-ProteinID:
XP_025906478
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MDGCGAAGSSGSGMMRLLLMAGAPAEIRGEGEERRYDQGRRAADLRALLRQELRTFIQGP
GLTPRVRSFLRSFARRPRSPDYVSQRRPAGAGRGGAARTARRSMAGPERAAAERADRLFA
LSGLFAVYKPKGPTSAALLNRLKERLVAEAGVQANKNKRKKQILKIGHGGTLDSAATGVL
VVGIGKGTKMLSTILAGSKKYTAIGRLGKATDTLDATGKVTEEKPYDKVTKGDLESVLQK
FTGDIMQVPPLYSALKKDGERLSSLMKRGEAVEAKPARPVKVYSLSLQHFQPPLFTLDVE
CGGGFYVRSLVSDIGKELSTCASVQKLTRTKQGPFTLEEHALHEDKWTIDEIARSLEHCM
SLLPGEPSHKKFKTEDPGETVVSCEDK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggatggatgcggggcagcgggatcgtcgggcagcgggatgatgaggctgctgctaatg
gccggggcaccggcggaaattagaggggaaggggaggaaagaagatacgaccaggggcgc
cgagctgccgatttgagggctctgctaaggcaggagctaaggacttttatccaaggccct
ggcctaaccccgcgggtgcggagcttcctccgcagcttcgcgcggaggccccgctccccg
gactacgtttcccagcggcgcccggcgggggcgggtcgaggcggggcggcccgcaccgcc
cgccgcagcatggcgggccccgagcgggcggctgccgagcgggccgacaggctcttcgcg
ctgagcggcctcttcgccgtctacaagcccaagggccccacctcggccgcgctgctcaac
cgcctcaaggagcggctggttgcagaagctggcgtgcaagcaaacaagaacaagagaaag
aagcaaatcttgaaaattgggcatggtggaactttggacagtgcagctacaggagttttg
gtggttggtattggaaaaggaacaaaaatgctgagcactatattggcaggttcgaagaaa
tacactgccattggacgactgggcaaagctactgatactttagatgctacaggaaaagta
actgaagaaaaaccttatgataaggtaacaaaaggagatctagaaagtgtgctgcaaaag
ttcacaggggacataatgcaagttcctccactctattctgctttgaagaaggatggagaa
aggctatcatctctgatgaagagaggagaagcagttgaagcaaagcctgctcggccagta
aaagtgtacagtctctctctccaacacttccagccaccactgttcacactggatgttgaa
tgtggtggtggcttttatgtcaggagcctggtcagtgatattggcaaagaactctctacc
tgtgccagtgtgcaaaagctgacccgaaccaagcaggggccatttacgctagaggagcat
gcgcttcatgaagacaaatggacaattgatgaaattgcacgatccttagagcattgcatg
tctctcctccccggagagccatctcataaaaaatttaagacagaggatcctggagaaact
gttgtgagctgtgaagataagtga
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