Nothoprocta perdicaria (Chilean tinamou): 112957729
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Entry
112957729 CDS
T07556
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112957729 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npd03021
]
112957729 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
npd03019
]
112957729 (SUPT5H)
Transcription machinery [BR:
npd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
112957729 (SUPT5H)
RNA polymerase I system
112957729 (SUPT5H)
Messenger RNA biogenesis [BR:
npd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
112957729 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW2_Spt5
KOW7_SPT5
KOW
KOW6_SPT5
KOWx_SPT5
Spt5-NGN
KOW1_SPT5
GPKOW_C
Ribosomal_L21e
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
112957729
NCBI-ProteinID:
XP_025907244
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MVPHRPHHVPISPQPLQIKSVVAPEHVKGYLYVEAYKQTHVKQAIEGVGNLRAGYWNQQM
VPIKEMTDVLKVVKEVTNLKPKAWVRLKRGIYKDDIAQVDYVEPSQNQISLKMIPRIDFD
RIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLIFEGNRYSRKGFLFK
SFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTEGTGKEREHNLQPGDNVEVCEGELI
NLQGKILSVDGNKVTIMPKHEDLKDMLEFPAQELRKYFRMGDHVKVIAGRFEGDTGLIVR
VEDNFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLE
RETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEI
RHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVGGFTPMSPRISSPMH
PSGAGEGSRRPGGMTSAYGRTPMYGSQTPMYGAGSRTPMYGSQTPLHDGSRTPHYGSQTP
LHDGSRTPAQSGAWDPNNPNTPSRADEDFDYGFEEEATPSPQGYGGTPNPQTPGYPDPAS
PQLNAPYNPQTPGTPAMYNTEQFSPYAVPSPQGSYQPSPSPQSYHQVAPSPVGYQNTHSP
ASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQSSGDWVTTDIQVT
VRDTYPDSQVAGQAGVIRSVTGGMCSVYLKDGEKVVSVSSEHLEPVTPTKSNKVKVILGE
DREATGILLSIDGEDGIVRMDLEEQLKILNLRFLGKLLEA
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggtgccccaccggccccatcatgtccccatatccccgcagcccctgcagatcaagtcg
gtggtggcccccgagcacgtcaagggctacctctacgtggaggcctacaagcagacgcac
gtcaagcaggccatcgagggcgtgggcaacctgcgtgccggctactggaaccagcagatg
gtccccatcaaggagatgaccgacgtgctcaaggtggtcaaggaggtcaccaacctcaag
cccaaggcgtgggtgcgcctcaagaggggcatctacaaggacgacatcgcccaggtggac
tacgtggagcccagccagaaccagatctcgctcaagatgatcccacgcatcgacttcgac
cgcatcaaggcgcggatgagcctgaaagactggttcgccaagcgcaagaagttcaagcgg
ccgccgcagcggctcttcgacgccgagaagatccggtccctggggggcgacgtggcctcc
gacggcgacttcctcatcttcgagggcaaccgctacagccgcaagggcttcctgttcaag
agctttgccatgtcggccgtgatcacggagggggtgaaacccaccctgtcggagctggag
aagttcgaggaccagcctgagggcatcgacctggaggtggtgacagagggcacaggcaag
gagcgggagcacaacctgcagccgggtgacaacgtggaggtgtgcgagggcgagctcatc
aacctgcagggcaagatcctcagcgtggacggcaacaaagtcaccatcatgcccaagcac
gaggacctcaaggacatgctggagttcccagcgcaggagctgcgcaagtacttcaggatg
ggcgaccacgtcaaggtgatcgcggggcgcttcgagggcgacacggggctcatcgtgcgc
gtcgaggacaacttcgtcatcctcttctccgacctcaccatgcacgagctcaaggtgctg
ccgcgggacctgcagctctgctcggagacggcgtccggcgtggacgtgggtggccagcac
gagtggggcgagttggtgcagctggacccgcagaccgtgggcgtcattgtgcgcctggag
cgcgagaccttccaggtgctcaacatgtacgggaaggtggtgaccgtgcggcaccaggct
gtcacccgcaaaaaggacaaccgcttcgccgtggccctcgactcggagcagaacaacatc
cacgtcaaggacatcgtcaaagtcatcgatgggccccactcgggccgggagggcgagatc
cggcacctcttccgcggcttcgccttcctgcactgcaagaagctggtggagaacggcggc
atgttcgtctgcaagacccgccacctcgtcctggccggtggctccaagccccgggacgtc
accaacttcacggtgggtggcttcacccccatgagcccccgcatcagcagccccatgcac
cccagtggggcaggtgagggctcgcgccgccccggcgggatgacgtcggcctacgggcgc
acgcccatgtacggctcccagacgcccatgtacggggccggctcccgcacccccatgtac
ggctcccagacgcccctgcatgacggcagccgcacgccgcactacggctcccagaccccc
ctgcacgacggcagccggaccccggcccagagcggcgcctgggaccccaacaaccccaac
acgccctccagggccgacgaggacttcgactacggttttgaggaggaggcgacgccgtca
ccgcagggctacggggggacccccaacccgcagacccccggctaccccgaccccgcgtcg
ccccagctcaacgctccctacaacccgcagacgccggggacgccggccatgtacaacacg
gagcagttctcgccctatgcggtgccgtcgccccagggctcctaccagcccagccccagt
ccccagagctaccaccaagtggcccccagcccggtgggctaccagaacacgcactcgccg
gccagctaccaccccacgccgtcacccatggcctaccaggccagccccagccccagcccc
gtgggctacagccccatgacgccgggggcgccgtcgccgggcggctacaacccgcacacg
cccggctcgggcatcgagcagagctccggagactgggtcaccaccgacatccaggtgacc
gtgcgggacacctacccggacagccaggtggcgggacaggcgggcgtcatccgcagcgtc
acgggcgggatgtgctctgtgtacctcaaggacggcgagaaggtggtgagcgtatccagc
gagcacctggagcccgtgacgcccaccaagagcaacaaggtcaaggtgatcctgggcgag
gaccgcgaggccaccgggatcctgctcagcatcgacggcgaggacggaatcgtgcgcatg
gacctggaggagcagctcaagatcctcaacctgcgcttcctgggcaagctgctggaggcc
tga
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