Nothoprocta perdicaria (Chilean tinamou): 112958205
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Entry
112958205 CDS
T07556
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npd04131
]
112958205 (VPS13A)
Membrane trafficking [BR:
npd04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112958205 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_M
VPS13_N
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
112958205
NCBI-ProteinID:
XP_025907790
Ensembl:
ENSNPEG00000012852
LinkDB
All DBs
Position
Unknown
AA seq
2975 aa
AA seq
DB search
MFYHGGYEESLVNLKQGVACRNVIPEGYDFVFRPISAKAKLLMNPRSDVDFSTPKMDLDV
NLQDIAVEFNKPQYFSVMELLESVDMMTRNLPYRKYRPDVPLHNHARIWWKYVIYGILEV
NVQPKLQMWSWEHIRHHRKQVKNYRDMYKTKITSKKPNEEILRLLEEFEKTLDIFNITLA
RQQAEVEATKAGLKIYRPGVKQDDENSGGWFSWIWGWSGEKKDQQKQEVKGSSLEELMTL
EEKAKLYAAIGYSETAVDPTLPKSYEAMKLSVKLLSMSISIRENEQTPELVKFALIDLST
VFTQRPGAQAIRFETKISSLEVTGMSQEKCTPCLLSSRTVYSDNSTSLLSIMFETNPLDE
KADQRLRIESQPLEIIYDARTVNNLVDFFRPPKDVHLEQLTSATLMKLEEFREKTSTGLL
YVIETQKVLDLKIDLMASYIIVPQKGFYDCTSNILLLDLGSLKMKSKSRSDLSKLKIGQS
SIEDIMSRAYDSFDIQLSSIQLLYSKHDENWQEARKLKHSSQHILQPLDVKVEFSRAMVV
TDTRMPKFKMSGQLPLLSVQISDQKLTSILELIDSIPKPKSTPATGSPPKMPEAAISPVL
SAPHLSQGVFSVLDLHSLTESESEEEFYDALSSPVEDLPFFEASCGSLKRGNSTRRQKLR
KQESMKNMTDFQLTFEVAEVLIKLCRLTNNIETPVLQLEVVGLGTELKLRTFDMTANAFL
REVCLLCPEYMDDNGRPVYIITTLDNVEDDLLTLEYIKADINGPELRTTYQNVLQKIKVN
FSSLDIHLHTETLLNAMNYLNSLLPKQETKVAEEPVQEKLEEKKDVLKKLTSKKSKYEDI
VDLNICADLSCLRVFIREKKQRISEIHIEGLDSQVIMKKAAMEVNAKLKNIIVVDSDEMA
LYKKALYITGKEVFNFRMISYVNATDGIAYTNMDVVDSRIYLTVGCIQVVFVNKFVSSVL
AFVNNFQAAKEAVTEATVQAAEKAATGVKELAERSSRLALDINIKAPVVIIPQSAMSANV
LVADLGLITVKNRFVIAKTKTRYTLPPVIDSMTVKLSELKLYRSYYESGSLQTEVQLLQP
LNLEVIVERNLAAAWYNEIPDIEISGRLKPMNLILSQEDITTILRTLNENIGGSSGAPPP
PLPESKDTNSHCSDVHSTSQHSAGVTVVTSAVVELHSPIKIKTTLKLDFRFDSLTLVLYS
PNSKQAAVTDQRDDLLKLAEFKLVLMSAAVKMLSDGSMNASVKLANCTLDDKRQSIQKAK
PRMVEMKHGFEKKFMVDISYKQGRDGTVLDTIIQEIYLCASMEFLLTVADIFLKANAESA
AAQRSFKQSLPLKEQAPLQPVSTMEMNIIVKNPEIVFVADLTKSYAPALVVTAQCEVFIK
NSPEMYSMTAAVKEIQMKACPFLPEERKGNIITVLQPCDFFFEMKRLGTNPQFADLMIKS
LTIKVSPIIINTVITITSALSPTTETKEEEISQIPPDLWNKKDIKNLKMWFLEESNEKED
TNPTTELVPTGETLKMNIESVIITLEAGVGHRTVPMLLAKSSFLGEVKNWSTLINLHSRL
ELEVHYFNEMFGVWEPLLEPLEIEKTDLFKPWILEFKMKKKAKKALVESDAEEENYKVPE
YKTVIHVSSKDQLNITLSKCGLVMLSNLGTAFAEAASQTSDIFKKDRAPFVIINSLGLPI
TVSPSDSFSVINVEFGAKIFHLEDGENLNMEYVRTKNESDQFTAMTTLSSKRFYIQICPH
GHSTVEKIPLTKVGRCLYTVRHEESGVERSIVCQIDTVEGSKMITIRSPIQIRNHFSIPL
NVFEEGSCLGTALPENEFNIPLSSYRSILSLQPVANECGVDGEYDMCEGITFDEIMKNVD
SLMQRKCQSVKSTSYSLVINIVPVKDTLTTSLSVDDQWDFPYVVHLWPTVLLRNFLPYQI
TYSVEGNGNKYDTLEDGCSAQIHNAVLDQTKLDLQLINYLDQNWKSEYYVKSNLPEISFT
TFYCITELDKTELDIAVHVTYTTGQMIIAIHSPYWMVNKTGRMLQYKADGIHRKHPPDYK
KPLLFSFQPKNFLQNNKVQLMVTDSELSDQFSLDTVGSHGSVKCKSHKKEYQVGVTINIS
SFNITRIVTFTPFFMISNRSKYNLEVSEEGKEKWIPIVLQQCIPFWPESDANKLLVRVEN
SBLPAKKINFDKQENCLLLHLDNKFGGIIVDVNLTEHSTVITFSDYHDGAAPFLLINHTR
EEFIEYGQSSLCELEDCLQPNKAVLYTWADPTGSRKLKWKCGKRTEEVSPKEDRMEILSL
DNRKMVYLVSFFEGLQRILLFTEDQNVFKLTYESVKAELAEQEIVLSLQDVGISLVNNYT
KQEVSYIGITSSDVVWETKPKKKSRWRPMSVKQTDKLEQEFKDYCELTPSENKIIELESN
VLVCLTPNGSNMKIQQPNEIPIRRNYLPALKVEYSSSAHQKSFRVQVYRIQIQNQIPGAI
FPFVFYPIKPPKSITLDSAPKPFTDVSIVMRTAGHSQISHIKYFKVLIQEMDLRLDLGFL
YALVEFFTQTDVPSDQELELFKKDVESLQEELMSVSSMDTSQISLYEFFHISPIKLHLSF
SLSTGGEDSNKEERKNELIPLQSLNLLLKSIGATLTDVQDVVFKLAFFELNYHFCTTQQL
QSAVIKHYSKQAIKQMYVLILGLDVLGNPFGFIRGLSEGVEALFYEPYQGAIQGPEEFIE
GMALGLKALVGGAVGGLAGAASRITGAMAKGVAAITMDEDYQQKRREAMNRQPTGLREGI
TRGGKGLVSGFVSGITGIVTKPIRGAQREGAAGFFKGVGKGLVGAVARPTGGIIDMASST
FQGIKKVADSSEDVISLRPPRFFGEDGVIRPYRLRDGTGSQMLQKIENGRFAKFRYIAHA
MVNSTDLLMVTKSGVLFVTKGTFGQLTCEWQYTYDEFTKEPFIVDGRRLRIEAKERVKSV
FHAKEFGKIINFKTPEDAKWILSKLEEVRENQPKL
NT seq
8928 nt
NT seq
+upstream
nt +downstream
nt
atgttctatcatggtggttatgaagagtctttggttaacttaaaacagggagttgcctgc
cgcaatgtaattccagagggttatgattttgtattccgcccaatttcagctaaagccaaa
ctccttatgaatcctcgatcagatgttgacttttcaacaccaaaaatggatttagatgta
aatttacaggatatagctgttgaattcaataagccacagtacttcagtgttatggagctc
cttgagtctgttgatatgatgactcgaaatctgccatatagaaaatacagacctgatgtt
ccattgcacaaccatgctaggatatggtggaaatatgttatttatggcattcttgaagta
aatgttcaaccgaagctccagatgtggtcatgggaacatattcggcaccataggaaacaa
gtgaagaactacagagacatgtataaaacaaagataacatccaaaaaacccaatgaagaa
atcttaaggttgttggaggaatttgaaaagaccttggatatttttaacatcaccctagcg
aggcaacaagcagaagttgaggctactaaggctggactaaaaatttacagaccaggagta
aaacaagatgatgaaaattctggtggctggtttagctggatatggggctggtcaggtgaa
aaaaaggaccaacagaaacaagaagtaaagggttcaagtcttgaagagctaatgacactt
gaagaaaaggctaaactttatgcagcaattggatatagtgaaacagccgtggatccaaca
cttccaaaatcatatgaagccatgaagttatctgtgaagctattaagcatgtctatatca
ataagagaaaatgagcaaacccctgagctggtaaaatttgcattaattgatttgagtaca
gtgtttactcagcgaccaggtgcacaagcaataagatttgaaacaaaaataagttcactt
gaagttacaggcatgtcccaagaaaaatgtacaccctgtctgctatcttctcgtacagtc
tattcagacaatagtacctcactcttgagcataatgtttgagaccaatcctttggatgaa
aaagcagaccagaggcttagaatagaatctcaaccattggaaataatatatgatgcaagg
acagtaaataatttggtggatttcttcaggcctccaaaagatgtacatttagagcagttg
acatcggcaactctaatgaagcttgaagagtttcgtgagaaaacatcaacaggtttgtta
tacgttattgaaacacagaaagttcttgacctcaaaattgacctaatggcttcatacatc
attgttccacaaaaaggattctatgactgtacatcaaacatactgcttctggatcttggt
agtcttaagatgaaaagtaaaagtcgttctgacttatctaaacttaaaataggacaaagc
agtattgaagatataatgtcaagagcttatgacagttttgacatccagcttagcagcata
cagttgctgtacagcaaacacgatgaaaactggcaagaggcacgtaagctgaaacactca
tcgcagcatatcttgcagccattggatgtaaaagtggaatttagcagggctatggttgtc
acagatacaagaatgcccaagttcaaaatgtctggacagctgcctttactctctgtccaa
atatcagaccagaagttgacaagtattttggaacttattgatagtattccgaagccaaaa
agtactccggctacaggttctccacccaaaatgcctgaggctgccatatctccagtgctg
tcagcaccgcatttatcccagggtgtgttttctgttttggaccttcattcgcttactgag
tcagaatcagaagaagaattttatgatgcgctaagcagtcctgtggaagacctgccattt
tttgaagcctcgtgtggttccctcaagcgaggcaatagcacaagacgacaaaaattacgt
aaacaagaatctatgaagaatatgacagatttccagctgacatttgaagtagctgaggtt
ttgattaaattatgtcgacttactaataatattgagacacctgtgctgcagcttgaagtt
gtaggcttaggcactgagctcaaattaagaacatttgacatgaccgcaaatgctttcctt
cgtgaagtttgcttactgtgcccagaatatatggatgataatggcagaccagtttatatc
attactactttggataatgttgaggatgatcttctcactctggaatacataaaggctgat
attaacggaccagaactcagaactacctatcagaatgttctacagaaaataaaggtgaat
ttttcttctctcgatattcatttgcatactgaaaccctcctaaatgccatgaactatctg
aacagtctcctaccgaaacaagaaactaaagttgcagaagaaccagtccaggaaaagtta
gaggaaaagaaggatgttcttaagaaattaacatccaaaaaatcgaagtatgaagatatt
gttgacctcaatatctgtgcagacttatcctgtttacgtgtttttattagagagaaaaaa
caaagaatatctgaaattcatatcgaaggtctggatagccaagtaatcatgaaaaaagca
gcaatggaagtgaatgcaaagttaaagaatatcattgttgtggattctgatgagatggca
ttatataagaaggctctttacatcacaggaaaagaagtcttcaactttagaatgatatct
tatgtgaatgctacagatggtattgcatatacaaatatggatgttgttgacagtcgtatt
tacctaactgttggttgcattcaagtagtttttgtcaacaagtttgtttcctctgttttg
gcttttgtaaataactttcaagctgccaaagaagcagttactgaggcaactgttcaagca
gcagagaaagcagccacaggtgtaaaagaactggcagagcgtagttcccgcttggcacta
gatatcaatattaaagcaccagttgtgatcattccgcagtcagcaatgtctgctaatgtg
ctggtggctgatcttggtctaatcactgtgaagaaccgattcgttattgctaaaaccaaa
acacgatatactctcccacctgttattgactctatgacagtgaaattgagtgaactgaag
ttatacagatcgtactacgaaagtggttcattgcaaactgaagtgcaactgctccagcca
ctaaatctggaagttattgttgaacgaaatttagctgctgcttggtataatgaaattcct
gatattgaaatatctggacgactcaagcctatgaatttgatcctcagtcaggaagacata
accacaatattaaggacactaaatgaaaatataggtgggagctctggtgcaccaccacca
cctttaccagaatcaaaagacacaaatagccattgtagtgatgtgcatagtacctcacag
cactctgcaggtgtgactgttgtgacatcagctgtagtggaactgcattcgcctattaaa
attaaaactacactaaaattggatttcagatttgactctctgactttggtattgtatagt
ccaaattcaaaacaggctgcagttacagatcagagggatgatcttttgaaacttgcagaa
tttaagttagttttgatgtcagccgcagtcaaaatgttatcagatggttcaatgaatgct
tcagtcaagttagcaaactgtacattagatgataaaagacagtcaatccagaaggcgaaa
ccgaggatggtggaaatgaaacatggatttgaaaagaaatttatggtggatataagctat
aagcaggggagagatggtactgttcttgacacaattattcaggagatatacctatgtgca
agcatggaatttctactgactgttgcagatatatttctaaaggctaatgcagaaagtgct
gctgcacagagaagtttcaaacaatctttacctttgaaggaacaagcacccttgcagcct
gtgtctacaatggaaatgaatattattgttaaaaatccagagatcgtgttcgtggcagat
ttaaccaaaagttatgctcctgcattggtggtcacagctcagtgtgaggtcttcattaaa
aatagccctgaaatgtacagcatgacagctgctgttaaagagatacaaatgaaagcatgc
ccttttcttcctgaagaaaggaaaggaaatattattacggtattacagccttgtgacttc
ttctttgaaatgaagcggttgggaactaatccacaatttgctgatctaatgattaaatct
ctaacaataaaagtttcaccaataatcataaatacagtgattaccattacatcagccctt
tctccaactacagaaacaaaagaggaagaaatcagtcaaattcctccagacctgtggaat
aagaaagatataaaaaatctaaaaatgtggtttcttgaagaatcaaatgaaaaggaagat
acaaatccaaccactgaactagttcccacaggagagacattgaaaatgaatattgaatct
gttattataacacttgaagctggagttggtcatcgaactgtaccaatgcttttagcaaag
tcatcatttcttggagaagtaaaaaactggagtacccttatcaacctacattctcgactt
gagctagaggtgcattattttaatgagatgttcggggtgtgggagcctttgcttgaaccg
ctagaaattgagaagactgatttattcaagccatggattcttgaattcaagatgaaaaag
aaggctaaaaaagcattagttgaatctgatgcagaagaagagaactacaaagtcccagaa
tacaaaacagtaatacatgtttcctcaaaagaccagctgaatattacactatccaaatgt
gggctagtaatgttgagtaacttaggcacggcatttgctgaagcagctagccaaacttca
gacatcttcaaaaaagaccgagcacctttcgttattataaattctttgggacttcctatc
actgtctcacctagtgattcctttagtgtcattaatgttgaatttggagcaaaaatattt
cacctggaagatggagaaaatttaaatatggaatacgtcagaacaaaaaatgaaagtgac
cagttcacagcaatgacaactctgagtagcaagaggttttacattcaaatctgtccacat
ggtcattctactgtggaaaagattccattgacaaaagtaggccgatgtctttacactgta
aggcatgaggagtcgggtgttgaaagatccattgtctgtcaaattgatacggttgaagga
agcaagatgataactatacgttctccaatacagataaggaatcacttctcaattccatta
aatgtttttgaggaaggaagttgtttaggaactgccttgccagaaaatgaattcaacata
cctctgtcctcttacagrtccatactgagtttgcaacccgttgccaatgaatgtggggtg
gatggagaatatgatatgtgtgaaggaattacatttgatgaaattatgaaaaatgttgat
agcttaatgcagaggaaatgccagtcggtgaagtcaactagctactcacttgtcatcaat
attgtcccagtaaaggacaccttgacaacttcattgtctgtggatgaccaatgggatttt
ccttatgttgtgcatttatggcctactgttcttctccgcaattttcttccatatcaaata
acttactctgttgaggggaatgggaacaaatatgacactttagaagatggatgctcagcc
cagattcacaatgcagtcttggatcaaacaaagctagacttgcagttgattaactatctt
gatcaaaattggaaaagtgagtactatgtaaaaagtaatctaccagagatcagcttcaca
acattttactgcatcactgaattggataagactgaattggatattgctgttcatgtgact
tacacaactgggcagatgatcattgcgattcacagtccatattggatggtaaataaaact
ggtcgaatgttgcagtacaaagctgatggaattcaccgcaagcatcctccagattacaaa
aagccgctgcttttttctttccagcccaaaaacttcctccaaaacaacaaggtacaactt
atggtaactgacagcgaactgtctgatcagttttcactggacactgttggaagtcatggt
tctgtgaaatgcaagagtcataaaaaggagtatcaagttggagtcactataaacatcagc
agctttaatattactagaattgtaactttcactccattttttatgatctcaaatagaagc
aaatacaatttggaggtgtctgaagaaggcaaggaaaagtggatacctattgttttgcaa
cagtgcattcctttttggccggaaagtgatgccaacaaactgcttgttagagttgaaaat
tctratcttcctgcaaagaaaataaattttgataagcaagaaaactgtctcttactgcat
ctggacaacaagtttggaggaattatagtggatgttaacctgaccgagcattctacagtg
attaccttttctgattaccatgatggtgcagctccatttctgttaattaaccatactaga
gaagaatttattgagtatggacagagttccctctgtgagctggaagattgccttcagcca
aataaggccgtgttgtatacttgggctgatccaacaggatctagaaaattgaaatggaaa
tgtggaaagagaactgaggaagttagccccaaggaagatagaatggaaatactcagcttg
gataatagaaagatggtgtatctagtatcattctttgaaggcttgcagcgtatccttctg
ttcactgaagaccagaatgtatttaaactgacatatgaaagtgtaaaagcagagctagca
gaacaagaaattgttctgtccctacaggatgttggaatttcattggttaataactacaca
aagcaggaggtgtcctatattggaattacaagttctgatgtggtttgggaaacaaaaccc
aagaagaagtcaagatggagacctatgagtgttaaacaaactgataaattagaacaagaa
tttaaagattactgtgagcttactccttcggaaaataagattattgagttggaatcaaat
gttttggtgtgtttaactcctaatggaagtaacatgaaaattcaacagccgaatgagatt
cctatcagaagaaattatctaccagctttaaaagtagaatatagttcgtctgcccatcag
aagtctttcagagttcaggtttacaggatacagatacaaaaccagattcctggagccata
tttccctttgtgttctatcctattaaacctccaaagtccatcaccctggattcagcacca
aaaccatttactgatgtcagtattgttatgagaactgcaggacattcacaaatatctcac
attaagtactttaaggtcttgattcaggagatggatctcagactagaccttggattcctg
tatgcattggttgaattctttacacagactgatgtccccagtgaccaggagttggaactc
ttcaaaaaggatgtagaatctctgcaagaagagctgatgagtgtgtcatcaatggacaca
tcacagatcagcttgtatgagttctttcatatctctccaataaagttacacttaagcttt
tcacttagtactggtggagaagatagcaacaaagaagaaagaaaaaatgaattgataccg
cttcaatccttgaatctcctactgaagagcataggtgccacactcacagatgtacaagat
gttgtctttaagttggcattctttgaactgaactatcacttctgtactacacaacaattg
caatcagccgttataaagcattactcaaaacaggctattaaacagatgtatgttcttatt
cttggccttgatgtcttgggtaatccatttggattcataaggggcttgtctgaaggagtt
gaagcattgttctatgagccttaccagggagccattcagggtcctgaagaatttatagaa
ggaatggcattgggccttaaggcactagtagggggagctgttggtggattagcaggggca
gcttcaagaatcacgggtgctatggcaaaaggagtagctgcaataaccatggatgaggat
taccagcaaaaaaggagagaagccatgaataggcaacccactggtctacgagagggtatc
actcgtggaggaaaaggattggtttctggttttgtcagtggcataacaggaatagttaca
aaaccaataagaggagcccaaagagaaggagcagctggctttttcaaaggtgttggaaaa
ggtttagtgggagcggtagctaggcctactggaggaatcatagatatggcaagcagcacc
tttcagggcattaaaaaagttgcagattcatcagaagatgtgataagtctgcgccctcct
cgcttctttggtgaagatggagttattagaccttacagactaagagatggaaccgggagt
caaatgttacagaaaatcgaaaatggaagatttgcaaaattcagatatattgcccatgcc
atggttaacagtacagatttgttaatggtaacaaaaagcggtgtgttgtttgtgacgaaa
ggcacgtttgggcagctcacgtgcgagtggcagtacacgtacgacgaatttaccaaagag
cccttcattgtggatggcaggaggctccgcatcgaagccaaggaacgagtgaagtctgtg
ttccacgccaaagaatttggaaagattattaatttcaaaactccggaagatgctaagtgg
atcctttctaaactggaagaagtgagagagaatcagccaaagctgtaa
DBGET
integrated database retrieval system
