Nothoprocta perdicaria (Chilean tinamou): 112958472
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Entry
112958472 CDS
T07556
Symbol
LSM5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03018
RNA degradation
npd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112958472 (LSM5)
09123 Folding, sorting and degradation
03018 RNA degradation
112958472 (LSM5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npd03019
]
112958472 (LSM5)
03041 Spliceosome [BR:
npd03041
]
112958472 (LSM5)
Messenger RNA biogenesis [BR:
npd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112958472 (LSM5)
mRNA degradation factors
5'-3' decay
Lsm complex
112958472 (LSM5)
Spliceosome [BR:
npd03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
112958472 (LSM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
Motif
Other DBs
NCBI-GeneID:
112958472
NCBI-ProteinID:
XP_025908103
Ensembl:
ENSNPEG00000000682
UniProt:
A0A8C6YN36
LinkDB
All DBs
Position
Unknown
AA seq
91 aa
AA seq
DB search
MAANASTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLVPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacgcgagcaccaacccgtctcagctcctgccgctcgagcttgtggacaaa
tgcataggctcgcgcattcatattgtcatgaagagcgataaagaaatcgttggaacgctt
ctagggtttgatgactttgtcaatatggtgttagaagatgttacagaatttgaaattaca
cccgagggtagaaggatcacaaaactagaccagatcttgctaaatggaaataatataaca
atgctggttcctggaggagaaggacctgaagtataa
DBGET
integrated database retrieval system
