Nothoprocta perdicaria (Chilean tinamou): 112959317
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Entry
112959317 CDS
T07556
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112959317 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npd04131
]
112959317 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npd04147
]
112959317 (VPS36)
Membrane trafficking [BR:
npd04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
112959317 (VPS36)
Exosome [BR:
npd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112959317 (VPS36)
Exosomal proteins of colorectal cancer cells
112959317 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
BBL5
DUF501
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
112959317
NCBI-ProteinID:
XP_025909102
Ensembl:
ENSNPEG00000006253
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MDRFVWSSGLLELEETLVIQQRGVRVYDGEEKGRFDSGVLLLSTHRLIWRDQKNHECCIA
IPLSQIVFIEEQAAGIGKSAKIVVHLHPASSNKEPGPFQSSKYSYIKLSFKEHGQIEFYR
RLSEEITQRRWENLPAAQTMQVNKSPQAGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMDKAKEMVELSKSIANKIKEKQGDITEDETVKFKSYLLSMGIANPVTRETYGSGTH
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLESLKLP
LRLRIFDSGVMVIELQSHNEEEMVASALETVSEKGSLTADEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFMTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttcgtgtggagcagcgggctgctggagctggaggagacgctggtgatccag
cagcgcggcgtgcgcgtctacgacggcgaggagaaggggaggtttgatagtggggtctta
ctgctcagcacacacagactaatctggagagatcagaagaaccacgaatgctgcattgct
attcctctgtctcagattgtcttcattgaagagcaggcagctgggataggcaaaagtgcc
aaaatagtcgttcatcttcatcctgcttcttcaaacaaagagcccggtccattccaaagc
agtaaatattcctacatcaaactttctttcaaagaacatgggcagattgagttctatagg
agattatcagaagaaatcacacagaggagatgggagaacctgcctgctgctcagaccatg
caggttaacaagagcccccaggcaggaagaataagggctgtaggaattgtaggcatcgaa
aggaagttagaggaaaaaagaaaagagactgacaaaaacatttccgaggctttcgaggac
cttagtaaactaatggacaaggctaaggaaatggtggagttatccaagtcaatagctaat
aaaattaaagaaaaacaaggtgacatcactgaggatgagactgttaagttcaaatcctat
ctgctgagtatgggaatagctaatccagttaccagggaaacatatggatctgggacacat
taccatatgcaactggcaaagcaactggctggaattctgcaggctccattagaggagcgg
ggagggatcatgtctcttactgaggtctactgcctggtaaatagggcacgaggattagag
ttgctgtcaccagaagatttagtaaatgcttgcaagatgttggagtcactgaaactaccc
ctgagacttcggatattcgacagtggtgtgatggtgattgaactccagtctcacaatgaa
gaggaaatggtagcttctgctttagagacggtatctgaaaagggttctctcacagctgat
gagtttgctaagcttgtggggatgtccgttctcttagccaaagaaaggctgctgctagct
gagaagatggggcatctttgcagagatgattcggtggaaggcttgagattctacccaaat
ttatttatgacacagagctaa
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