Nothoprocta perdicaria (Chilean tinamou): 112959528
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Entry
112959528 CDS
T07556
Symbol
EXOSC10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112959528 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npd03019
]
112959528 (EXOSC10)
Messenger RNA biogenesis [BR:
npd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
112959528 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
112959528
NCBI-ProteinID:
XP_025909335
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MHVWGSAAPPLSGFGDADAFVKHALGTVVAATKASNGLPQPGDEYDFYRSFPGFRAYCET
QGNRLLHCMSRVMQYHGCHSHIKDRKKVTELEDKFDMLVDSNDVILERVGILLDEAAGVN
KKEPVLPAGLQLPQTIISSWNRKGGESHKRTKSETFRLLHAKNISRPQLKFREKIDNSNT
PFVPKLFIKPNALKPLPEALTKSGRERKERPEDLDVPAALADFIHQQRTQQTEQDMFAHP
YQYELEHFSPPDGVLKKPELQIYRPIKETPCHFISTLDKLVELNEKLMNCKEFAVDLEHH
SYRSFLGLTCLMQISTRTEDFIIDTLELRSDMNILNETFTDPAIVKVIHGADSDVEWLQK
DFGLYLVNMFDTHQAARLLNLGKHSLDHLLKLYCNVDADKQYQLADWRIRPLPEEMIQYA
RDDTHYLLYIYDKVREALWERGNEQPTQLQVVWQRSRDICLKKYIKPJFTDESYLELYRR
QKKHLNTQQLAAFRLLFAWRDKMARQEDESTGYVLPNHMLLKIAEELPKEPQGIIACCNP
VPPLVRQQINELHLLIQQAREMPLLKSENALAVKKRTSLSTSERLENTFFGPHDSSRIPT
DDVQNNSALEPAPVLQHGHLFSDGEETMPESTCLVATATVSIFSESDEDEGKEKPLTTAQ
QKAQRIMESFENPFRMYLPSEQNPAYVSQSAKFDPSSKIYEISNRWKLMSQVQEQKESKE
ETKKKIAQQSAARDQAQKVYKEATENIVSVRQQAAQEQANKKRERNISETGTELPKQEKK
RPKASQQAEELEAPKQFTPFDYSKSNFKVFAGSSKSKQSPQFDPAKQAYTGKKFAGANKL
QQSAGNRSMSYLAGRADRGSRHHWPKR
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtgtggggcagcgcggcgccgccgctctccggcttcggcgacgccgatgctttc
gtcaagcacgcgctcggcacggtggtggccgccaccaaggcgtccaaygggctccctcag
cctggcgacgagtacgacttttaccgcagcttccccggcttccgggcgtactgcgagacg
caaggcaaccggctcctgcactgcatgagcagggtgatgcagtaccacggctgccacagc
cacatcaaagaccgcaaaaaagtgacagagctagaagataaatttgatatgttggttgac
tcaaacgacgtcatccttgagagagtgggtattttactggatgaagcagctggagtgaac
aaaaaagagcctgtcctccctgctgggctgcagctcccrcagacaatcatttccagctgg
aaccgcaagggaggggaatcccacaagagaacaaagtctgaaaccttcagattgcttcat
gccaagaatatctcccgaccacagcttaagtttcgggaaaarattgataattccaatacg
ccctttgtacctaaactttttattaagccaaatgctctgaaacctttgcctgaagccctt
acaaaaagtggacgggaacgaaaggagcgccctgaagacttggatgtaccagctgctttg
gcagacttcattcaccagcagaggacacagcaaactgaacaggacatgtttgctcaccct
taccagtatgaactggagcatttttctcccccagatggagttctcaaaaaaccagagctc
cagatatacaggcccatcaaggaaacaccttgccattttatcagcacgctggataaactg
gtagaactaaatgaaaagcttatgaactgtaaagaatttgctgtggacttagagcaccat
tcctacaggagcttcctgggcttgacatgtctcatgcagatttccacccgaacagaggac
ttcattattgatacactggagctacgcagtgacatgaacattctcaatgagactttcaca
gaccctgcgattgtgaaggtcatccatggagctgattcagatgtggaatggctgcaaaaa
gactttggtttgtacttggtgaacatgtttgatactcaccaagctgctcgtctcctcaac
ctgggcaagcactccttggaccatttgctcaagctctattgcaacgtggatgctgacaag
cagtaccagctggctgactggcggatacggcctttgccagaagaaatgattcagtatgcc
cgcgatgacactcactacttgctctacatctacgataaagtgcgggaggcactgtgggag
agagggaacgaacagcccactcagctgcaggttgtgtggcaacgcagcagggacatctgc
ctgaagaaatacatcaagcccmtttttacagatgagtcctaccttgagctctacagaagg
cagaagaaacacctcaacacgcagcagctagcagcatttcggttactgtttgcatggagg
gacaagatggcacgtcaagaggatgagagtacaggatatgtgctaccaaatcacatgcta
ctgaagatagcagaggagttgcccaaagaaccccagggcatcattgcttgctgtaatcct
gtcccaccactagttcgtcagcagattaatgaattgcatcttctcattcagcaggcccga
gagatgcctcttctcaagtctgagaatgctttggcagtcaagaagagaacatctctctcc
acctccgagaggcttgagaataccttttttggacctcatgatagttcccggattcctaca
gatgatgttcagaacaactctgccttagaacctgcaccagttttgcaacacggtcatctc
ttttcagatggtgaggagacaatgccagagtcaacatgccttgttgctactgccactgtc
agcatattcagcgaatctgatgaggatgaagggaaggagaagcctttaaccactgcacag
cagaaagctcagcgcataatggagtcctttgaaaatccatttagaatgtacttaccttca
gagcagaatcctgcctacgtctcacaatctgcaaagtttgatccatcatcaaaaatttac
gaaatcagtaatcgatggaagttgatgagtcaggtacaagagcagaaggaatccaaggag
gagaccaaaaagaaaatagcccagcagtcagctgctcgtgaccaagcacagaaggtgtat
aaagaggcaacagaaaacattgtgtctgtgcgtcagcaagccgcgcaggaacaagctaat
aaaaagagggagagaaacataagtgaaacaggaacagagttgccaaaacaagagaagaag
cggccaaaagcctcccagcaagcagaggagctggaagcaccaaagcagttcactcccttt
gattacagcaagtccaacttcaaagtgtttgcgggaagcagcaaatcaaagcagtcaccc
cagttcgacccagccaagcaggcctacaccggcaagaaatttgctggagccaacaaactt
cagcagtcggctggaaaccgaagcatgtcctacctggcgggragagccgataggggctcc
aggcaccactggccaaagagatag
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