Nothoprocta perdicaria (Chilean tinamou): 112959781
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Entry
112959781 CDS
T07556
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03440
Homologous recombination
npd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112959781 (PALB2)
03460 Fanconi anemia pathway
112959781 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npd03400
]
112959781 (PALB2)
DNA repair and recombination proteins [BR:
npd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
112959781 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
112959781 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
PP-binding
PP-binding_2
Motif
Other DBs
NCBI-GeneID:
112959781
NCBI-ProteinID:
XP_025909671
LinkDB
All DBs
Position
Unknown
AA seq
1295 aa
AA seq
DB search
MAEAAGAAVVIGATVPTGFELTAAAEVEEKLGARAGRSLPTSAAXISCGFSGSCFICEIS
FSAGSGDAPSPSAGRHETCQLQVESCAVPSTERRTSDSCQERPEFLTNKVNLSDTSQAES
TKGSQESAPGESVRPAAEGKEDQATGGRMKLRKRRXKAVVPEEGGSLCDALLVNSEENVT
SEXSRKEELGSPVFRRSRFSSTGEGARRASGAAAARGAGSSSCAAAGSPEPPGAPSVSRS
HGPPGLPPGSSDSVSPAASNSTREEPSRVEKQVLNERTGEGPRELSLRDCXSEKDVLPPD
RNNTLISESGSSEGNQNEANDFNCFPTDPLTGRGETLLEARELETESRFSHLEKLRTPEA
ENTMNSYTVVEGLLFPVEYYVRTTRRVSNCQRKVDLDAVILSQLGKSKKGLRNKCKQKDA
NSDQPSQEMMENDDESGVRPFPSLGADSSPVDSGSPRQSLTPSNSSSTSLGSFSQSSVAS
TRCEQRQSQRKQKGRRRSXCKPAVNQASPEPAAGVHRAAPKEGTSVLANDCPSEKENSEG
DLEKSSLRELSPHCAAAAGCVEAGAPGTAEPMGAAPPRGGRVLGKGREAPLDQLQSALRK
SAALDPAQDTRGGARGAARPPGTGEGPSLRPSARRRAARAPTGKSRRCDQRMDSEDPAAP
GLLPADPDAXDFLFSFRSLQQLPSTLGIKDFHLPDEEFGLLKLEKFKSSPVNDLEVFVPS
VSGDHVASEEARGLQMNTEKKSPESNVISPFKNVLCRLPHLESPASKKGLCTSELLFTPT
ETLLAGAPTQPDSQISASLFPVLGATPAVLPSDVLPDTPSARPLPAKAACGQAVDRGECR
DSVLARGSGSCGEESAGKEEEPCAVLRLEAAGGAERRSDGMLLFKKPEQPEGGGPGSCGA
QGDQEETAAEQLAAVQLDGLREETLQLISKLKDSSRSCAVDVSTMWWEAAGCRELRVVTA
CETSVSLWKLLAPGHWGKVCAWQPGEIPVIQIIPLPDTCNLVCVALGDLEIGEIRLLHYC
SESDSFKQSLVKTGNIKAVLGLRGRRLVSSSRAAQEQQVEITTFSEAGRSKEGQTLMPPE
ETVLAFAEVEGMRDALVGTTAVNSIVIWNLKTGQLLKKMHVGYSYPASICHRAYSDSGLL
FVVLSHPHAKESEQCGNPAFRVVAFNPRTARSTGVVFSSLPPGHTGRYVEGEVAAAAAAA
VLSSGSIADLPPLTLEGIKERVLYVLKLYDKIDPEKLTAESHFMKDLGLDSLDQVEIIMA
MEDEFGFEIPDGDAEKLMCPQEIVDYIADKKDVYE
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggcgggcgcggctgtggtgatcggcgccacggtgcccacgggcttcgag
ctgacggcggcggccgaggtggaggagaagctgggcgcgcgggccggcaggtcccttcca
acctcagccgctytcatctcgtgtggcttttctgggagttgtttcatatgtgagatctct
ttttcygcaggttccggggatgccccatctccgagtgctggcagacacgaaacctgtcag
ctgcaggtcgagagctgcgctgtccctagcacggagaggagaacgtccgactcttgtcaa
gaaaggcccgaattcctcaccaacaaagttaacttgtcagacacttcccaggcagaaagc
accaagggcagccaggaaagtgcccccggggaatcggttaggccggctgcagaggggaaa
gaagaccaagcaacgggaggtaggatgaagctgaggaagaggagaaygaaggctgtcgtc
ccagaggaagggggatctctgtgtgatgcgctgctggtgaacagtgaagaaaatgtgacg
agtgaagygtccaggaaagaggagctggggtctccagtgttccgacgaagccgtttctcg
agcaccggggaaggtgcccgcagagcatccggagcagccgctgctcggggcgcgggcagt
tcctcgtgcgccgcggcgggcagccccgagccgccgggtgccccgtccgtgtcccgcagc
cacgggccaccggggctgccgccagggagcagcgactccgtgtcgcctgccgccagcaac
agcaccagggaagaaccttcccgcgtggaaaagcaagtgctcaacgagaggacgggggaa
ggtcccagggaattgtccctcagggactgcamgtcagagaaggacgtgttgcctcccgac
agaaataacacactaattagcgagagcggaagctctgaaggaaatcagaatgaggctaac
gacttcaattgctttcctacagatcctcttacaggccgtggtgaaacgctgttggaggct
cgagaacttgaaaccgagtcaagattttctcacctagagaagctgaggactcctgaagct
gaaaacacaatgaattcttacacsgtggttgaggggcttctcttcccagttgaatactac
gtccggacaacgcgccgtgtgtctaattgccagaggaaagtggacctagatgcagtaatt
ctcagccagctgggtaagagcaagaagggtctgcgaaataagtgcaagcagaaagatgca
aattcggatcagccgtcccaagaaatgatggaaaacgatgacgagtcaggagtcaggccg
ttcccttcgcttggtgccgacagtagcccggtggattcgggcagccctcgacagtctctg
actccgtctaacagcagcagcacttcgcttggctccttctcgcagagcagcgtggccagc
acaaggtgtgagcagagacagtcgcagaggaagcaaaagggaaggagaaggtccaygtgc
aaacccgctgtgaaccaagcgtcgccggagcctgcagcgggtgtgcatcgcgcagcgcca
aaagaaggcaccagtgtcttagcaaacgactgtccgagcgaaaaggaaaactccgagggt
gatcttgaaaaatcgtccttgcgtgagctgagcccgcactgtgccgcagctgccggctgc
gtggaggcaggagcgcctggcaccgcagagcccatgggtgctgctcctcctcggggaggg
cgagtgctcggcaagggccgcgaggctccgttagatcagctccaaagtgcacttmggaag
agcgctgctttggatccagcgcaagacacccgggggggcgcccgcggggcggcgcggccc
ccggggacgggcgaggggccctccctgcgcccctccgcgaggcgcagagccgcccgggca
cccacaggcaagagcagaagatgtgaccagcgaatggactcagaggatccagctgctcct
ggtctcctgcctgcagaccctgatgctrcagactttctcttcagcttccgcagcctccag
cagctgccctccacgctgggtatcaaagactttcacctacctgaygaggaatttgggctg
ctaaaacttgagaaatttaagtcttcccctgtgaatgacttggaagtttttgttcctagt
gtgtccggagatcatgtggcttcagaggaagcacgaggtctgcaaatgaacacagaaaag
aagagtcctgaaagcaacgtgatctcgcctttcaaaaacgtgttgtgcaggttaccccat
ttagaaagcccagcttccaagaagggactttgcacgagcgagttgctctttactcccacg
gagactctcttagccggtgctcccactcagccagactcccagatttccgcatcccttttc
cctgtgttgggtgcgacccccgccgtcttgcccagtgacgtccttcccgacaccccttcc
gcgcggcccttgccagccaaagcagcatgtggccaggctgtggatcgtggggaatgtaga
gactctgtccttgcccgggggtcgggcagctgcggggaagagtctgctgggaaggaggag
gaaccatgtgcagtgttgcgtctggaagctgcgggaggtgctgagcgaaggtctgatggg
atgctgctcttcaagaagccggagcagccggagggcggagggccggggagctgcggagcg
cagggtgaccaggaggaaactgcagcagaacagttggctgcggtgcagcttgatggcctg
agagaagagaccttgcagcttatatcaaagttaaaggattcctcgcgctcttgcgcggtg
gacgtgagcaccatgtggtgggaagccgctggctgcagagagctgcgcgttgtgacggcc
tgtgagacctctgtgtccctgtggaagctcctggcacccgggcactggggaaaggtctgt
gcttggcagcctggagagattcctgtaatacagattattcctctgccagacacctgtaat
ctcgtgtgtgtagcactgggagatttggagattggagaaataaggctcttgcattattgt
tctgagagtgactcattcaagcagtcactggtgaaaactggaaatataaaagctgtcctt
gggctaaggggcaggaggctggtgagcagcagcagggcagcgcaggagcagcaggtggag
ataacgaccttctcggaggcaggraggagcaaggagggacagactctgatgcctcctgaa
gaaactgttctagcttttgctgaagtagaaggaatgagagatgctttggttggcaccacc
gcagtgaacagcattgttatctggaatttgaaaacgggccagctcttgaaaaagatgcac
gttggttattcctacccagcttcaatctgccaccgggcgtattccgactccggcctcctc
tttgttgtcctgagtcacccgcacgccaaggagagcgagcagtgcgggaaccccgcgttc
cgcgtcgtggccttcaacccccggacggccaggagcaccggcgtcgttttctcctcgctg
ccgcccggacacaccggcaggtacgtggagggcgaggtggcggcggcggcggcggcggcc
gtgctctcgtccggcagcatcgcggacctgccgccgctgaccttggagggcatcaaggag
cgcgtgctctacgtgctcaagctctacgacaagatcgaccccgagaagctcaccgccgag
tcccacttcatgaaggacctgggtctggacagcctggaccaggtggagatcatcatggcc
atggaggacgagttcggattcgagattcctgacggagacgcagagaagctaatgtgtcca
caggagatagtagactacattgcagataaaaaggatgtttatgaataa
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integrated database retrieval system
