Nothoprocta perdicaria (Chilean tinamou): 112960257
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Entry
112960257 CDS
T07556
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112960257 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npd03041
]
112960257 (DHX8)
Enzymes [BR:
npd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112960257 (DHX8)
Spliceosome [BR:
npd03041
]
Complex C
Other components
Step II factors
112960257 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
AAA_16
PhoH
TsaE
Transformer
ABC_tran
Cas3-like_C_2
Sigma54_activ_2
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
112960257
NCBI-ProteinID:
XP_025910259
Ensembl:
ENSNPEG00000011970
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MADAVALEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVINLAEKNTTFDTFKAVLVK
NGAEFTDSLVSNLLRLIQTMRPPSKPSTSKEAVVKPKSEKEKLKELFPALCRPDNPNVRH
MLDEDDVKVAADALKELEALMPSADRQGKQRNSDHRAKKRRKSRSRSRDRKRRHRSRSRS
RSRTWEKNRGKSRYRSRSRSRSPSRDHRDREKYIEKSSDRWRDKHIDRPPPEEPSIGDIY
NGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTG
SKTSLSMKDVDQDTGEDLNPNRRRNLVGETNEETSMRNPDRPSHLSLVNAPEVEDDTLER
KRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPF
LRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTH
WVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIF
RLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAK
RVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAH
ERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILY
TKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELI
ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK
TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAST
VLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPM
LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAV
YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAIC
SGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTI
DPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcggtggcgctggaggagctcgccaagctcgagtacctgtcgctggtctcc
aaggtgtgcacggagctggacaaccacctcggcatcaacgacaaggacctggccgagttc
gtgataaaccttgcagagaaaaacactacgtttgacacgtttaaagctgttcttgtgaag
aatggcgccgagttcactgattcccttgttagtaatttgctacgtctcatccaaacaatg
cggcctccatcaaagccatctactagcaaagaggcagttgtcaagcccaaatcggagaaa
gaaaagttgaaggaattgtttccagctctttgcaggccagacaatcccaacgtcaggcat
atgctggatgaagacgatgtgaaagtagcagctgatgcacttaaagagcttgaagctcta
atgcctagtgctgacagacaaggcaagcaaaggaacagtgaccaccgggcaaagaaaagg
aggaagagccgaagccgcagcagggacaggaagcgaaggcacagatctcgttcaaggtct
cgttccaggacttgggagaagaacaggggaaaatccagatatcgctcaagaagcaggagt
cggagtcccagcagggaccatagggatcgagagaaatacatcgagaagagcagtgataga
tggagagacaagcacatagaccgtccaccgcctgaagagccatccattggtgacatttac
aatggcaaagtgacaagcataatgcagtttggatgctttgtgcagctcgaaggattaagg
aagcgctgggagggcttggtccacatctctgagcttcgaagagaaggacgggttgccaat
gttgctgatgttgtgagcaaaggacaaagagtaaaagtcaaagtgttgtcttttactgga
tccaaaaccagcctgagcatgaaggatgttgatcaagacactggggaagacttgaatccg
aaccggaggagaaacctggttggagaaaccaatgaagaaacctctatgaggaacccggac
agacccagtcacctttctctggtaaatgctccagaagtggaggatgatacccttgaaagg
aaacgcctcactcgaatttcagacccagagaaatgggaaataaaacagatgattgcagct
aatgtgctttccaaagaagagtttcctgacttcgatgaggaaactgggatccttcctaaa
gttgatgatgaagaagatgaggaccttgagattgagctggttgaagaagagccaccattc
cttcgaggtcataccaagcaaagcatggatatgagtcccatcaaaatagtaaagaatcca
gatggatccttgtcccaggctgcaatgatgcagagtgcattagctaaagaaagacgggaa
cttaaacaagcccaaagagaggcagagatggattccatcccaatgggactcaacacgcac
tgggtggatcctcttcctgatgtggatggaagacaaatagctgcaaacatgcgaggtatt
gggatgatgcctaatgatattccagaatggaagaaacatgcatttggtggcaacaaagct
tcttacggtaaaaagacccaactttccatcatcgagcaaagggagagtctgccaatcttc
agactaaaggagcagctgatacaagcggtgcatgacaaccagattctgatcgttattgga
gagacagggtctggaaaaacaacacagattacccaatacttggctgaggcagggtataca
tcaagaggaaagattggatgcactcagcctcgcagagttgctgcaatgtctgttgcaaaa
cgagtctcggaggaatttggctgctgtctgggacaagaggttggctacactattcggttt
gaagactgtactagccctgaaacagtcatcaaatacatgacagatggtatgttactgagg
gaatgccttatagatcctgatctgacscagtatgccattatcatgctggatgaagcccat
gagaggaccattcatacagatgttctctttggactcctgaagaagacagtgcagaaacgg
caggatatgaagttgatagtgacgtcagcaacactrgatgctgtgaaattctctcagtat
ttctatgaagctccaatcttcacaattccagggagaacatatccagtagaaattctgtat
accaaggagccagaaacagattatttggatgccagtttaattacagtaatgcagatccac
ttaacagagccaccaggtgacatattagtgtttctgactggtcaagaagagattgacact
gcgtgtgaaatcctctatgagaggatgaaatctctaggacccgatgttccagagttaatc
atcttgccggtatattcagctttgccaagtgaaatgcaaaccaggatctttgacccagcc
ccaccaggaagcagaaaggttgtcattgccactaacattgctgagacctctctgactatt
gatggaatatattatgtagttgatccgggctttgtgaagcagaaagtttataattccaaa
actggaatagaccagctggttgttacaccaatttcacaggctcaagcaaagcagcgagca
ggaagagctgggagaacaggaccaggaaaatgctacaggctatacacagagcgtgcttat
cgagatgaaatgctaaccaccaatgtgcctgaaatccagagaacaaatctggccagtaca
gtgctctccctgaaggctatggggatcaatgatttgctttcctttgactttatggatgct
ccccctatggaaactctyataactgccatggaacaactctacaccttgggagccctggat
gatgaagggctgctcactcgacttgggcgcaggatggcagaattccccttggagcccatg
ttgtgcaagatgttgatcatgtccgtacatctgggatgcagtgaggaaatgctaacaata
gtctctatgctctctgttcaaaatgtgttctacaggccaaaggataaacaagctcttgct
gatcaaaagaaagccaagttccatcagacagaaggtgaccatctcactctactggctgtg
tacaattcctggaaaaataacaagttttcaaatccctggtgctatgaaaattttatccag
gctcggtccctacgcagggcgcaggacatccgcaagcagatgttgggcattatggacaga
cacaagctggatgtggtgtcctgtggcaaggcaacagttcgagtccagaaggccatttgt
agcggcttcttccgaaacgcagcaaagaaggatccacaggagggttatcggacactcatt
gatcaacaagtagtctatattcacccatccagtgcccttttcaaccggcagccagaatgg
gtggtgtatcacgaactggtgctaaccactaaggagtatatgcgtgaagtgaccacgatt
gatccccgctggctcgttgagtttgcrcctgctttcttcaaggtttctgacccaaccaag
ctgagcaaacagaagaagcagcagcggctggagcccctgtacaatcgctacgaggagccc
aatgcttggaggatctcgcgtgcgttcagacgccgatga
DBGET
integrated database retrieval system
