Natrinema pellirubrum: Natpe_0115
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Entry
Natpe_0115 CDS
T02425
Name
(GenBank) TATA-box binding protein (TBP), component of TFIID and TFIIIB
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
npe
Natrinema pellirubrum
Pathway
npe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Natpe_0115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npe03000
]
Natpe_0115
03021 Transcription machinery [BR:
npe03021
]
Natpe_0115
Transcription factors [BR:
npe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
Natpe_0115
Transcription machinery [BR:
npe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Natpe_0115
RNA polymerase III system
TFIIIB
Natpe_0115
RNA polymerase I system
SL1/TIF-1B
Natpe_0115
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-ProteinID:
AGB30057
LinkDB
All DBs
Position
105526..106086
Genome browser
AA seq
186 aa
AA seq
DB search
MTDPKDTINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFR
SGKIVCTGAKSTDDVHESLRIVFDKLRELQIQVNEDPEIVVQNIVTSADLGRNLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGKKPEDAEHAVDKIVSRLE
DLGLLE
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgacggatccgaaggacaccatcaacatcgaaaacgtggtggcgtcgaccggcatcgga
caggaactcgacctccagagcgtcgcgatggacctcgagggggccgactacgatcccgag
cagttccccggtctcgtctaccgcacccagaatcccaagtccgccgcgctgatcttccgg
tcggggaagatcgtctgtaccggcgcgaaaagcaccgacgacgttcacgagagccttcga
atcgtcttcgacaagctccgtgaactccagatccaggtcaacgaggaccccgagatcgtc
gtccagaacatcgtcaccagcgccgacctcggtcggaacctcaacctgaacgcgatcgcg
atcgggctggggctggagaacatcgagtacgagcccgagcagttccccgggctcgtctat
cgactcgacgaccccgaggtcgtcgcgctgttgtttggctcgggcaagctcgtcatcact
ggcggcaagaagcccgaggacgccgaacacgccgtcgacaagatcgtctcccggctcgag
gacctcggcctgctcgagtaa
DBGET
integrated database retrieval system
