KEGG   Natrinema pellirubrum: Natpe_0139
Entry
Natpe_0139        CDS       T02425                                 
Name
(GenBank) DNA polymerase sliding clamp subunit
  KO
K04802  proliferating cell nuclear antigen
Organism
npe  Natrinema pellirubrum
Pathway
npe03030  DNA replication
npe03410  Base excision repair
npe03420  Nucleotide excision repair
npe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:npe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Natpe_0139
   03410 Base excision repair
    Natpe_0139
   03420 Nucleotide excision repair
    Natpe_0139
   03430 Mismatch repair
    Natpe_0139
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:npe03032]
    Natpe_0139
   03400 DNA repair and recombination proteins [BR:npe03400]
    Natpe_0139
DNA replication proteins [BR:npe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Natpe_0139
DNA repair and recombination proteins [BR:npe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Natpe_0139
   MMR (mismatch excision repair)
    Other MMR factors
     Natpe_0139
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    Natpe_0139
SSDB
Motif
Pfam: PCNA_N PCNA_C
Other DBs
NCBI-ProteinID: AGB30081
UniProt: L0JIB6
LinkDB
Position
complement(130781..131524)
AA seq 247 aa
MFKAIVSAETLTSALDSISVLVDECKIHLEEDGLEIRAVDPANVGMVDLSLDASAFESYE
ADGGLIGVDLSRLEDIAGMADAGQLIQLELDEETRKLHIQIDGLEYTLALIDPDSIRQEP
DIPDLDLPAEVVLEGKDVNRSVTAADMVSDHIALGVDEGEEYFYVDAAGDTDDVHLELTQ
EDLIDLQLGPAHSLFSLDYLKDMNKAIPGDTEVTLALGEEFPVKIYFGFAEGQGQVTYML
APRIQSD
NT seq 744 nt   +upstreamnt  +downstreamnt
atgttcaaggccatcgtgagcgccgaaacgctcaccagcgcgctcgattcgatcagcgtg
ctggtcgacgagtgcaaaatccacctcgaggaagacgggctggagatccgggccgtcgat
ccggccaacgtcgggatggtcgacctctcgctcgatgcgtctgcgttcgagtcctacgag
gccgacggcgggctgatcggtgtcgatctctcgcggctcgaagacatcgcgggcatggcc
gacgccggccagctcatccagctcgaactcgacgaggagacccgcaagctccacatccag
atcgacgggctcgagtacacgctcgcgctcatcgaccccgactccatccgacaggagccc
gacatcccggatctcgatctccccgccgaggtcgtcctcgaggggaaagacgtcaaccgc
tcggtgaccgccgccgacatggtctccgaccacatcgccctaggcgtcgacgagggcgag
gagtacttctacgtcgacgccgcaggcgacaccgacgacgtccacctcgagctgacccag
gaagatctgatcgacctccagctcgggcccgcccactcgctgttctcgctggactatctc
aaggacatgaacaaggcgatccccggcgacaccgaggtcacgctggcgctgggcgaggag
ttccccgtcaagatctacttcggcttcgccgaggggcagggccaggtcacctacatgctc
gcgccgcgcatccagagcgactga

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