Natrinema pellirubrum: Natpe_0205
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Entry
Natpe_0205 CDS
T02425
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
npe
Natrinema pellirubrum
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npe03016
]
Natpe_0205
Enzymes [BR:
npe01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Natpe_0205
Transfer RNA biogenesis [BR:
npe03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Natpe_0205
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AGB30145
UniProt:
L0JF29
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All DBs
Position
complement(204158..205234)
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AA seq
358 aa
AA seq
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MTLEGRFDAADGVVRVGGDARQRYHDSRGYGYPLSGNEIALAPVEAAHLLYRGDLEAVVD
DASGERLGFREFISREPGADFGVRFLVYADLRSRGFYLSPAAEPWVADPPGGAADFAVFP
RGKGPGDGEIAYALRIIGERTDIPAMELQPGVLAVVDEESEITYFEVDRRDPTGTSGSDA
DLPDGCEADLLADRVVVWEPPLDLYEQTFYGQPLEGREYDEPTLQCSLLEAAYLAEREAI
DLEPTTVRERGREVEGERFDRRLRVYAALRERGVVPKTGYKFGADFRTYANVESVENLGH
SELLVRVHPADHVFEPRDLALDVRLAHGVRKTMVFALVGDEAADGDGIEWWSLERLTP
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgacactcgaggggcggttcgacgcggccgacggcgtcgtccgggtcggcggcgacgcg
cgccagcggtatcacgactcgcggggctacggctacccgctctccggcaacgagatcgcg
ctcgcacccgtggaagcggcccatctgctctaccgaggagacctcgaggcggtcgtcgac
gacgcgagcggcgagcggttgggctttcgcgagttcatttcgcgggagccgggggccgac
ttcggcgtgcggtttctcgtctacgcggacctgcgctcgcgcgggttctacctctcgccg
gccgcggagccgtgggtggccgacccgccgggcggcgcggccgacttcgcggtcttcccg
cgggggaaaggccccggcgacggcgagatcgcctacgccctgcgaatcatcggcgagcga
acggacattcccgccatggaactccagccgggcgtgctggcggtcgtcgacgaggagagc
gagattacctatttcgaggtcgaccggcgcgatcccaccgggacatcggggtccgacgcc
gacctccccgacggctgcgaggccgacctgctggccgaccgggtggtcgtctgggagccg
ccgcttgacctctatgagcagacgttctacggccagcccctcgagggccgggagtacgac
gagccgacgctgcagtgttccctgctcgaggcggcctatctggccgaacgggaggcgatc
gatctcgagccgacgacggtccgcgagcggggccgggaggtcgaaggcgagcggttcgac
cgccggctgcgggtctacgcggcactgcgcgagcgcggcgtcgtgccgaagacgggctac
aagttcggcgctgacttccggacctacgccaacgtggagtccgtcgagaacctgggccac
tccgaactgctggtgcgggtgcatccggccgaccacgtcttcgagccgcgggatctggcg
ctggacgtgcggctggcacatggcgtccggaagacgatggtgttcgcgctggtgggcgac
gaggcggccgacggcgacgggatcgagtggtggtcgctcgagcgattgacaccctaa
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