KEGG   Natrinema pellirubrum: Natpe_0818
Entry
Natpe_0818        CDS       T02425                                 
Name
(GenBank) Lhr-like helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
npe  Natrinema pellirubrum
Brite
KEGG Orthology (KO) [BR:npe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:npe03400]
    Natpe_0818
Enzymes [BR:npe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Natpe_0818
    5.6.2.6  RNA 3'-5' helicase
     Natpe_0818
DNA repair and recombination proteins [BR:npe03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Natpe_0818
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WH_Lhr ResIII AAA_25 HypA Zn_ribbon_8 DUF116 Zn_ribbon_PaaD
Other DBs
NCBI-ProteinID: AGB30735
UniProt: L0JGT0
LinkDB
Position
805800..808634
AA seq 944 aa
MTDGDVAAFTHLGATVRGALSERGFSQPTAPQRLAIPPLAAGENTLVIAPTGSGKTETAM
LPVFDHLVAEEGPPEGLGALYITPLRALNRDMRERLEWWDEYLDLEVDVRHGDTTDYQRR
KQAEDPPDVLITTPETVQAMLTGERLREALSDVSHVVIDEVHELAASKRGAQLAIGLERL
YDLAGPFQRIGLSATVGDPGEVGQFLTGGRPCEIREIDVGSNVDVTVREPEITEEDERLA
GELMTEADTASHVRLIRDLVADHESTLIFVNTRQTAEALGSRFKELDLPIGVHHGSLSKE
ARIDVEDRFKAGEIDGLLCTSSMELGIDVGQVDHVIQYKSPRQVTRLLQRIGRAGHRQDE
VSSGTVVTTRPDDTFEALSIARRARDGEVEPAAIHEGSLDVVANQLPAIVQSRGDTYLDE
AIETITRSYPFRNVPEATIREIAGELDRNRILWFDEGEDRIETTGGTWQYVYANLSMIPD
EETYEVHDIASGGQIGTLDERFVVNFAQPGEVFIQRGEMWRIAEIDDEEGRVKVSPIEDP
AGEVPSWIGQEIPVPAAVAGEVGEIRAVAEPQLGTGADAAAVGRELAHRYPADEYTLTEA
CTQLAQQVDDDAPMPTADRLVLERRGRTIVINAPFGHTANETLGRVLSALLGQRAGSSVG
LETDPYRIELEVPNSIATSEVLEVIEETDPDHVEAIVELGLKNSDALAFRLAQVSAKFGA
LKRWQGSGRLSNDRLLAALEDTPMYEEAIREVFHEDLDIERASAVLERLQSGDLELVTHR
GHTPIGKGGRSSGGKELLAPENADASVIETVRERLQNDRVILLCTHCTEWKVKTKVKRVA
DQPECPECGSTRIASLNPWADEMVQAVRAQEKDEEQQRMTERAFRAASLVQSHGKQAVIA
MAARGVGPHNAAQIINKLREDEAEFYRDILSKEREYARTQSFWD
NT seq 2835 nt   +upstreamnt  +downstreamnt
atgactgacggggacgtcgcggcgtttacgcacctcggagcgacggtccgcggggcgctc
tccgaacgcggcttttcgcaaccgacggcaccacagcggctggcgatcccgccgctcgcc
gccggcgagaacacgctggtgatcgcgcctaccgggagcggcaagaccgagacggcgatg
ttgcccgtcttcgatcacctggtcgccgaggaaggaccgccggaggggttgggcgcgctc
tatattaccccgctgcgggcgctcaatcgcgacatgcgcgagcgcctcgagtggtgggac
gagtacttagacctcgaagtcgacgttcgccacggcgacaccaccgactaccagcggcgc
aagcaggccgaggacccgccggacgtgctgatcacgacgcccgagacggtccaggcgatg
ctcaccggcgagcggctgcgcgaggcgctttccgacgtctcccacgtcgtaatcgacgag
gtccacgaactcgccgcctccaagcggggcgcacagttggcgatcggtctcgagcggctg
tacgacctcgccggcccgttccagcggatcgggctctcggcgacggtcggcgatcccggc
gaagtggggcagttcctgacgggcggccgaccctgcgagatccgggagatcgacgtgggg
agcaacgtcgacgtgacggttcgcgaacccgagattacggaggaagacgagcgcctggcc
ggcgaactgatgaccgaggccgataccgccagccacgtccggctgatccgcgatctggtc
gccgatcacgagtcgacgctgatcttcgtcaatacgaggcagacggcggaggcgctgggg
tcgcggttcaaggaactcgacctcccgatcggcgtccaccacggctcgctctcgaaggag
gcccggatcgacgtcgaggaccgcttcaaggccggcgagatagacgggctgctgtgtacg
tcctcgatggaactcggcatcgacgtgggacaggtcgatcacgtgatccagtacaagagc
ccgcggcaggtcacccgcctgctccagcggatcggccgcgcgggccatcgacaggacgag
gtctcgagcgggacggtcgtgacgacccgtccggacgacaccttcgaggcgctgtcgatc
gcgcgccgggcccgcgacggcgaggtcgagccggcggcgatccacgaggggagcctggac
gtggtcgccaaccagttgcccgcgatcgtccagagccgcggcgacacgtacctcgacgag
gcgatcgagacgatcactcgctcctatccgttccgaaacgtgcccgaggcgacgatccgc
gagatcgcgggagaactggaccgcaatcgaatcctctggttcgacgagggtgaagatcgc
atcgagaccaccggcggcacgtggcagtacgtctacgccaacctctcgatgatccccgac
gaggagacctacgaggtccacgacatcgcctcggggggccagatcgggaccctggacgag
cgcttcgtcgtcaacttcgcccagcccggcgaggtgttcatccagcgcggcgagatgtgg
cggatcgccgagatcgacgacgaggagggccgagtcaaggtcagcccgatcgaggacccc
gcgggcgaggttccatcgtggatcgggcaagaaatacccgtccccgccgcggtcgcgggc
gaagtgggtgaaattcgggccgtggcggagccccaactcgggacgggagccgacgccgcc
gcggtcggccgcgaactcgctcatcggtaccccgctgacgagtacacgctgaccgaggcc
tgcacgcaactcgcacaacaggtcgacgacgacgcgccgatgccgacggccgaccgcctg
gtcctcgagcgacgggggcggacgatcgtcatcaacgcgccgttcggccacacggccaac
gagacgctcggccgggtgctgtcggcgctgctgggccagcgggccggctcctcggtcggc
ctcgagaccgacccctaccggatcgaactcgaggtgccgaactcgatcgcgaccagcgag
gtactcgaggtcatagaggagaccgacccggaccacgtcgaggcgatcgtcgaactcggg
ctgaaaaattccgacgcgctcgccttccggctggcgcaggtctcggcgaagttcggcgcg
ttaaagcgctggcagggctcgggccgactctcgaacgatcgcctgctggcggccttggag
gacacccccatgtacgaggaagcgatccgggaggtgttccacgaggacctcgacatcgaa
cgtgcgagtgcggtcctcgagcggctccagtcgggcgacctcgaactggtgacccaccgc
ggccacacgccgatcgggaagggaggccggtcgtcaggcggcaaggaactgctcgcgccc
gaaaacgctgacgccagcgtcatcgagacggtccgggagcgcctgcagaacgatcgggtc
atcctgctgtgtacccactgtacggagtggaaggtgaaaacgaaagtcaagcgggtggcc
gaccagcccgagtgcccggaatgtggctcgacccggatcgcctcgctgaacccgtgggcc
gacgagatggtccaggcggtccgagcccaggaaaaagacgaggaacaacagcgaatgacc
gaacgcgcgttccgggccgcgagcctcgtccagagtcacggcaagcaggccgtaatcgcg
atggccgcccgcggggtcgggccgcacaacgccgcccagatcatcaacaaactccgcgag
gacgaagcggagttctatcgcgacatcctctcgaaagagcgagagtacgcccggacccag
tcgttctgggactga

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