Natrinema pellirubrum: Natpe_0858
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Entry
Natpe_0858 CDS
T02425
Name
(GenBank) GTPase
KO
K03231
elongation factor 1-alpha
Organism
npe
Natrinema pellirubrum
Pathway
npe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Natpe_0858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npe03019
]
Natpe_0858
03016 Transfer RNA biogenesis [BR:
npe03016
]
Natpe_0858
03012 Translation factors [BR:
npe03012
]
Natpe_0858
04131 Membrane trafficking [BR:
npe04131
]
Natpe_0858
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npe04147
]
Natpe_0858
Messenger RNA biogenesis [BR:
npe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
Natpe_0858
Transfer RNA biogenesis [BR:
npe03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
Natpe_0858
Translation factors [BR:
npe03012
]
Eukaryotic type
Elongation factors
Natpe_0858
Membrane trafficking [BR:
npe04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
Natpe_0858
Exosome [BR:
npe04147
]
Exosomal proteins
Proteins found in most exosomes
Natpe_0858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP_EFTU_D3
GTP-eEF1A_C
EF-G_D2
RsgA_GTPase
MMR_HSR1
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
AGB30775
UniProt:
L0JGX1
LinkDB
All DBs
Position
845116..846717
Genome browser
AA seq
533 aa
AA seq
DB search
MSRDRALLERALDRGEQDGGNVEFKERLSRDVHLEGGRRESLAAQLRHRLLSGDGEATYV
VGVTDDGGLAGIDPDTFSETMDVLSLLAEEADAHIEDVQTWGINDGLVGVAQVREGGVLE
TDDEHVVVGTAGHVDHGKSTLVGSLVTGKADDGDGATRAFLDVQPHEVERGLSADLSYAV
YGFDDEGPVRVRNPNRKADRADVVQNADRLVSFVDTVGHEPWLRTTIRGLVGQKLDYGLL
VVAADDGPTRTTREHLGVLLATDLPTIVAITKTDTVDQQRVDEVEREVERLLREVDKSPL
RVSRHGVDAAVDEISERVVPIVETSAITMDGLETLDELFDRLPKTSQDTGEFRMYVDRSY
SVTGVGAVASGTVMAGEVEAGDELLIGPMADGRFQEVEVRSIEMHYHRVDKAQAGRIVGI
ALKGIKESAIERGMVLLPREADPDPVREFEAEVMVLNHPTRIGEGYEPVVHLETIGEAAA
FYPENGRLLPGDSGTTTVRFKFRPYLVEEGQKFVFREGRSKGVGTVTDVTPME
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtgaccgggccctcctcgagcgggccctggaccgtggcgaacaggacggtggc
aacgtcgagttcaaagagcgattgtcacgggacgtccacctcgagggtgggcggcgggag
agtctcgccgcgcaactgcgacatcgtctcctttcgggcgacggcgaggcgacctacgtc
gtcggcgtcaccgacgacggcggtctcgccggcatcgatcccgacaccttctccgagacg
atggacgtcctctccttgctggccgaggaggccgacgcccatatcgaggacgtccagacg
tggggcattaacgacgggctggtcggcgtcgcacaggtccgggagggcggcgtcctcgag
accgacgacgaacacgtcgtcgtcgggaccgccggccacgtcgaccacgggaagagtacg
ctcgtcggctcgctggtcacgggcaaagccgacgacggggacggcgcgacgcgggccttc
ctcgacgtccagccccacgaggtcgagcggggcctctccgccgatctgtcctacgccgtc
tacggcttcgacgatgaggggccagtccgggtccggaatccgaatcgcaaggccgaccgc
gcggacgtcgtccagaacgccgaccggctggtctcgttcgtcgacacggtcggccacgag
ccgtggctccgaacgacgatccgcgggctggtcggccagaaactcgactacgggctgttg
gtcgtcgccgccgacgatggccctactcgcaccacgcgggaacacctcggcgtcttgctc
gccaccgacctcccgacgatcgtcgcgatcacgaagaccgacaccgtcgaccagcaacgc
gtcgacgaggtcgaacgcgaggtcgagcggctcctccgagaggtcgacaagtcgccgctt
cgcgtctcccgtcacggcgtcgacgccgccgtcgacgagatcagcgagcgtgtcgttccg
atcgtcgagaccagcgcgatcaccatggacggcctcgagacgctggatgagttgttcgat
cgactccccaagacctcccaggacaccggcgagttccggatgtacgtcgaccgcagctac
tcggttacgggggtcggcgcggtcgcctccggcaccgtcatggccggcgaagtcgaggcc
ggcgacgaactcctgatcgggccgatggccgacggccgctttcaggaagtcgaggtccga
tcgatcgagatgcattatcaccgggtcgacaaagcgcaggccggccggatcgtcggcatc
gccttgaaggggatcaaagagagcgccatcgagcgcggcatggtcttgctgccccgcgag
gccgaccccgaccctgtccgggagttcgaggccgaggtcatggtgctgaatcaccccacc
cggatcggtgaggggtacgaacccgtcgtccacctcgagacgatcggcgaggccgcggcc
ttctatccggagaacggccggctgctgccgggcgattcggggacgacgaccgtccggttc
aagttccgcccgtacctcgtcgaggagggccagaagttcgtcttccgcgagggtcgcagc
aagggcgtcgggacggtgaccgacgtcaccccaatggagtga
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